RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 CANXP27824 592 aaKnown RBP23.17■■□□□ 1.3
MRPL28-207ENST00000461550 PLEKHF1Q96S99 279 aa23.17■■□□□ 1.3
MRPL28-207ENST00000461550 N4BP2Q86UW6 1770 aaPredicted RBP23.17■■□□□ 1.3
MRPL28-207ENST00000461550 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
MRPL28-207ENST00000461550 STARD3NLO95772 234 aa23.16■■□□□ 1.3
MRPL28-207ENST00000461550 NEFMP07197 916 aa23.16■■□□□ 1.3
MRPL28-207ENST00000461550 USPL1Q5W0Q7 1092 aa23.16■■□□□ 1.3
MRPL28-207ENST00000461550 FMNL2Q96PY5 1086 aa23.16■■□□□ 1.3
MRPL28-207ENST00000461550 PARP3Q9Y6F1 533 aa23.16■■□□□ 1.3
MRPL28-207ENST00000461550 ZPR1O75312 459 aa23.15■■□□□ 1.3
MRPL28-207ENST00000461550 C10orf71Q711Q0 1435 aa23.15■■□□□ 1.3
MRPL28-207ENST00000461550 MYBBP1AQ9BQG0 1328 aaKnown RBP23.14■■□□□ 1.29
MRPL28-207ENST00000461550 DDR1Q08345 913 aa23.14■■□□□ 1.29
MRPL28-207ENST00000461550 PXDNLA1KZ92 1463 aa23.13■■□□□ 1.29
MRPL28-207ENST00000461550 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
MRPL28-207ENST00000461550 ZNF330Q9Y3S2 320 aaPredicted RBP23.12■■□□□ 1.29
MRPL28-207ENST00000461550 MAPK8IP3Q9UPT6 1336 aa23.12■■□□□ 1.29
MRPL28-207ENST00000461550 PRAMEF22A3QJZ6 481 aa23.11■■□□□ 1.29
MRPL28-207ENST00000461550 NFE2L2Q16236 605 aa23.11■■□□□ 1.29
MRPL28-207ENST00000461550 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
MRPL28-207ENST00000461550 MIS18AQ9NYP9 233 aa23.11■■□□□ 1.29
MRPL28-207ENST00000461550 NARFQ9UHQ1 456 aa23.11■■□□□ 1.29
MRPL28-207ENST00000461550 GRIN3BO60391 1043 aa23.11■■□□□ 1.29
MRPL28-207ENST00000461550 A1BGP04217 495 aa23.11■■□□□ 1.29
MRPL28-207ENST00000461550 TEX13AQ9BXU3 409 aaPredicted RBP23.11■■□□□ 1.29
MRPL28-207ENST00000461550 A0A0G2JLW4 131 aa23.1■■□□□ 1.29
MRPL28-207ENST00000461550 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
MRPL28-207ENST00000461550 ZNF784Q8NCA9 323 aaPredicted RBP23.1■■□□□ 1.29
MRPL28-207ENST00000461550 PIP4K2AP48426 406 aaPredicted RBP23.09■■□□□ 1.29
MRPL28-207ENST00000461550 BCL2L12Q9HB09 334 aa23.09■■□□□ 1.29
MRPL28-207ENST00000461550 AFDNP55196 1824 aaKnown RBP23.08■■□□□ 1.29
MRPL28-207ENST00000461550 POLRMTO00411 1230 aaKnown RBP23.08■■□□□ 1.29
MRPL28-207ENST00000461550 TM4SF1P30408 202 aa23.08■■□□□ 1.29
MRPL28-207ENST00000461550 TAF7Q15545 349 aaPredicted RBP23.08■■□□□ 1.29
MRPL28-207ENST00000461550 PNNQ9H307 717 aaKnown RBP23.08■■□□□ 1.29
MRPL28-207ENST00000461550 USP16Q9Y5T5 823 aa23.08■■□□□ 1.29
MRPL28-207ENST00000461550 SCN7AQ01118 1682 aa23.08■■□□□ 1.28
MRPL28-207ENST00000461550 KDM3BQ7LBC6 1761 aa23.07■■□□□ 1.28
MRPL28-207ENST00000461550 ZNF316A6NFI3 1004 aaPredicted RBP23.07■■□□□ 1.28
MRPL28-207ENST00000461550 NFIXQ14938 502 aa23.07■■□□□ 1.28
MRPL28-207ENST00000461550 DPEP1P16444 411 aa23.06■■□□□ 1.28
MRPL28-207ENST00000461550 TGFB2P61812 414 aa23.06■■□□□ 1.28
MRPL28-207ENST00000461550 TBC1D2BQ9UPU7 963 aa23.06■■□□□ 1.28
MRPL28-207ENST00000461550 CCDC146Q8IYE0 955 aa23.05■■□□□ 1.28
MRPL28-207ENST00000461550 PRKRIP1Q9H875 184 aaPredicted RBP23.05■■□□□ 1.28
MRPL28-207ENST00000461550 BRCA1P38398 1863 aaKnown RBP23.05■■□□□ 1.28
MRPL28-207ENST00000461550 SNRPA1P09661 255 aaKnown RBP23.05■■□□□ 1.28
MRPL28-207ENST00000461550 BICDL1Q6ZP65 573 aa23.05■■□□□ 1.28
MRPL28-207ENST00000461550 A0A087WZG4 1122 aa23.04■■□□□ 1.28
MRPL28-207ENST00000461550 IL6STP40189 918 aaPredicted RBP23.04■■□□□ 1.28
MRPL28-207ENST00000461550 BCS1LQ9Y276 419 aa23.03■■□□□ 1.28
MRPL28-207ENST00000461550 NRXN2Q9P2S2 1712 aa23.03■■□□□ 1.28
MRPL28-207ENST00000461550 LAMB4A4D0S4 1761 aa23.02■■□□□ 1.28
MRPL28-207ENST00000461550 RIPK4P57078 832 aa23.02■■□□□ 1.28
MRPL28-207ENST00000461550 RRP7AQ9Y3A4 280 aaKnown RBP23.02■■□□□ 1.28
MRPL28-207ENST00000461550 BCORQ6W2J9 1755 aa23.01■■□□□ 1.27
MRPL28-207ENST00000461550 KCNA3P22001 575 aa23.01■■□□□ 1.27
MRPL28-207ENST00000461550 WDR43Q15061 677 aaKnown RBP eCLIP23.01■■□□□ 1.27
MRPL28-207ENST00000461550 TBC1D9BQ66K14 1250 aa23.01■■□□□ 1.27
MRPL28-207ENST00000461550 CHRNA5P30532 468 aa23■■□□□ 1.27
MRPL28-207ENST00000461550 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
MRPL28-207ENST00000461550 SERPINB2P05120 415 aa22.99■■□□□ 1.27
MRPL28-207ENST00000461550 TMPOP42166 694 aaKnown RBP22.99■■□□□ 1.27
MRPL28-207ENST00000461550 NBPF26B4DH59 902 aa22.98■■□□□ 1.27
MRPL28-207ENST00000461550 CAMTA2O94983 1202 aa22.98■■□□□ 1.27
MRPL28-207ENST00000461550 NEUROD2Q15784 382 aa22.98■■□□□ 1.27
MRPL28-207ENST00000461550 NBPF10Q6P3W6 841 aaKnown RBP22.98■■□□□ 1.27
MRPL28-207ENST00000461550 DZIP3Q86Y13 1208 aaKnown RBP22.98■■□□□ 1.27
MRPL28-207ENST00000461550 NBPF15Q8N660 670 aa22.98■■□□□ 1.27
MRPL28-207ENST00000461550 PNISRQ8TF01 805 aaKnown RBP22.98■■□□□ 1.27
MRPL28-207ENST00000461550 CARMIL3Q8ND23 1372 aa22.98■■□□□ 1.27
MRPL28-207ENST00000461550 ADAMTS8Q9UP79 889 aa22.98■■□□□ 1.27
MRPL28-207ENST00000461550 EIF4A1P60842 406 aaKnown RBP22.97■■□□□ 1.27
MRPL28-207ENST00000461550 ARFGEF1Q9Y6D6 1849 aa22.96■■□□□ 1.27
MRPL28-207ENST00000461550 GIGYF1O75420 1035 aaPredicted RBP22.95■■□□□ 1.26
MRPL28-207ENST00000461550 CCDC24Q8N4L8 307 aa22.95■■□□□ 1.26
MRPL28-207ENST00000461550 PIM2Q9P1W9 311 aa22.95■■□□□ 1.26
MRPL28-207ENST00000461550 TSPYL4Q9UJ04 414 aa22.95■■□□□ 1.26
MRPL28-207ENST00000461550 ANKRD31Q8N7Z5 1873 aa22.94■■□□□ 1.26
MRPL28-207ENST00000461550 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
MRPL28-207ENST00000461550 ATP10DQ9P241 1426 aa22.93■■□□□ 1.26
MRPL28-207ENST00000461550 LMOD3Q0VAK6 560 aa22.92■■□□□ 1.26
MRPL28-207ENST00000461550 ARHGAP27Q6ZUM4 889 aa22.92■■□□□ 1.26
MRPL28-207ENST00000461550 DLEC1Q9Y238 1755 aa22.92■■□□□ 1.26
MRPL28-207ENST00000461550 DALRD3Q5D0E6 543 aaKnown RBP22.92■■□□□ 1.26
MRPL28-207ENST00000461550 NGEFQ8N5V2 710 aa22.92■■□□□ 1.26
MRPL28-207ENST00000461550 ADCY9O60503 1353 aa22.91■■□□□ 1.26
MRPL28-207ENST00000461550 SETDB2Q96T68 719 aa22.91■■□□□ 1.26
MRPL28-207ENST00000461550 PRR5LQ6MZQ0 368 aa22.9■■□□□ 1.26
MRPL28-207ENST00000461550 ZNF526Q8TF50 670 aaPredicted RBP22.9■■□□□ 1.26
MRPL28-207ENST00000461550 TRIM35Q9UPQ4 493 aa22.9■■□□□ 1.26
MRPL28-207ENST00000461550 COL11A2P13942 1736 aaPredicted RBP22.89■■□□□ 1.26
MRPL28-207ENST00000461550 C2CD5Q86YS7 1000 aa22.89■■□□□ 1.25
MRPL28-207ENST00000461550 MYL6BP14649 208 aa22.88■■□□□ 1.25
MRPL28-207ENST00000461550 CCDC184Q52MB2 194 aa22.88■■□□□ 1.25
MRPL28-207ENST00000461550 NPHP1O15259 732 aa22.87■■□□□ 1.25
MRPL28-207ENST00000461550 CNBD1Q8NA66 436 aa22.87■■□□□ 1.25
MRPL28-207ENST00000461550 ZNF652Q9Y2D9 606 aa22.87■■□□□ 1.25
MRPL28-207ENST00000461550 LAS1LQ9Y4W2 734 aaKnown RBP22.87■■□□□ 1.25
MRPL28-207ENST00000461550 HLFQ16534 295 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms