RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 LRRCC1Q9C099 1032 aa25.03■■□□□ 1.6
CCM2-203ENST00000461377 BCL11AQ9H165 835 aa25.03■■□□□ 1.6
CCM2-203ENST00000461377 HSP90AB1P08238 724 aaKnown RBP25.02■■□□□ 1.6
CCM2-203ENST00000461377 SLC39A6Q13433 755 aa25.02■■□□□ 1.6
CCM2-203ENST00000461377 WDR17Q8IZU2 1322 aa25.02■■□□□ 1.6
CCM2-203ENST00000461377 NFATC2IPQ8NCF5 419 aa25.02■■□□□ 1.6
CCM2-203ENST00000461377 SALL3Q9BXA9 1300 aa25.02■■□□□ 1.6
CCM2-203ENST00000461377 KSR2Q6VAB6 950 aa25.02■■□□□ 1.6
CCM2-203ENST00000461377 DDX21Q9NR30 783 aaKnown RBP eCLIP25.02■■□□□ 1.6
CCM2-203ENST00000461377 ABCA3Q99758 1704 aa25.01■■□□□ 1.59
CCM2-203ENST00000461377 POLA2Q14181 598 aa25.01■■□□□ 1.59
CCM2-203ENST00000461377 ALDH1L1O75891 902 aa25■■□□□ 1.59
CCM2-203ENST00000461377 SDSP20132 328 aa25■■□□□ 1.59
CCM2-203ENST00000461377 PDE1AP54750 535 aa25■■□□□ 1.59
CCM2-203ENST00000461377 MAP3K2Q9Y2U5 619 aa25■■□□□ 1.59
CCM2-203ENST00000461377 C5P01031 1676 aa25■■□□□ 1.59
CCM2-203ENST00000461377 COL5A2P05997 1499 aaPredicted RBP25■■□□□ 1.59
CCM2-203ENST00000461377 PARP4Q9UKK3 1724 aaKnown RBP25■■□□□ 1.59
CCM2-203ENST00000461377 NBPF7P0C2Y1 421 aaPredicted RBP25■■□□□ 1.59
CCM2-203ENST00000461377 PDIA6Q15084 440 aa25■■□□□ 1.59
CCM2-203ENST00000461377 NFKBIBQ15653 356 aa24.99■■□□□ 1.59
CCM2-203ENST00000461377 NHSL1Q5SYE7 1610 aa24.99■■□□□ 1.59
CCM2-203ENST00000461377 PPP1R42Q7Z4L9 355 aa24.98■■□□□ 1.59
CCM2-203ENST00000461377 ANTXR1Q9H6X2 564 aa24.97■■□□□ 1.59
CCM2-203ENST00000461377 ZNF496Q96IT1 587 aaPredicted RBP24.96■■□□□ 1.59
CCM2-203ENST00000461377 KIF2CQ99661 725 aa24.96■■□□□ 1.59
CCM2-203ENST00000461377 TOM1L2Q6ZVM7 507 aa24.96■■□□□ 1.59
CCM2-203ENST00000461377 RAB11FIP3O75154 756 aa24.95■■□□□ 1.58
CCM2-203ENST00000461377 DDX58O95786 925 aaKnown RBP24.95■■□□□ 1.58
CCM2-203ENST00000461377 SNX21Q969T3 373 aa24.95■■□□□ 1.58
CCM2-203ENST00000461377 TTC5Q8N0Z6 440 aa24.94■■□□□ 1.58
CCM2-203ENST00000461377 SRGAP3O43295 1099 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 MX1P20591 662 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 CABP4P57796 275 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 MTX1Q13505 466 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 CASC1Q6TDU7 716 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 HSCBQ8IWL3 235 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 SLKQ9H2G2 1235 aaPredicted RBP24.93■■□□□ 1.58
CCM2-203ENST00000461377 STAP2Q9UGK3 403 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 PCDH11XQ9BZA7 1347 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 PCDH11YQ9BZA8 1340 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 SNRPA1P09661 255 aaKnown RBP24.93■■□□□ 1.58
CCM2-203ENST00000461377 LINS1Q8NG48 757 aa24.93■■□□□ 1.58
CCM2-203ENST00000461377 ZCRB1Q8TBF4 217 aaKnown RBP24.92■■□□□ 1.58
CCM2-203ENST00000461377 FMNL2Q96PY5 1086 aa24.92■■□□□ 1.58
CCM2-203ENST00000461377 CARD10Q9BWT7 1032 aa24.92■■□□□ 1.58
CCM2-203ENST00000461377 GLI3P10071 1580 aa24.91■■□□□ 1.58
CCM2-203ENST00000461377 SURF6O75683 361 aaKnown RBP24.91■■□□□ 1.58
CCM2-203ENST00000461377 C9orf78Q9NZ63 289 aaPredicted RBP24.91■■□□□ 1.58
CCM2-203ENST00000461377 HDAC5Q9UQL6 1122 aa24.91■■□□□ 1.58
CCM2-203ENST00000461377 UTYO14607 1347 aa24.9■■□□□ 1.58
CCM2-203ENST00000461377 AOX1Q06278 1338 aa24.9■■□□□ 1.58
CCM2-203ENST00000461377 TUBGCP6Q96RT7 1819 aa24.9■■□□□ 1.58
CCM2-203ENST00000461377 CWF19L2Q2TBE0 894 aaKnown RBP24.9■■□□□ 1.58
CCM2-203ENST00000461377 AIMP1Q12904 312 aaKnown RBP24.89■■□□□ 1.58
CCM2-203ENST00000461377 LRP10Q7Z4F1 713 aa24.89■■□□□ 1.57
CCM2-203ENST00000461377 USP26Q9BXU7 913 aa24.89■■□□□ 1.57
CCM2-203ENST00000461377 IL2RBP14784 551 aa24.88■■□□□ 1.57
CCM2-203ENST00000461377 TSHZ3Q63HK5 1081 aa24.88■■□□□ 1.57
CCM2-203ENST00000461377 RHPN1Q8TCX5 695 aa24.88■■□□□ 1.57
CCM2-203ENST00000461377 USP16Q9Y5T5 823 aa24.88■■□□□ 1.57
CCM2-203ENST00000461377 NKX1-1Q15270 411 aaPredicted RBP24.87■■□□□ 1.57
CCM2-203ENST00000461377 HSP90AB4PQ58FF6 505 aa24.87■■□□□ 1.57
CCM2-203ENST00000461377 LARP1Q6PKG0 1096 aaKnown RBP24.87■■□□□ 1.57
CCM2-203ENST00000461377 XAGE3Q8WTP9 111 aa24.87■■□□□ 1.57
CCM2-203ENST00000461377 KIF1BPQ96EK5 621 aa24.87■■□□□ 1.57
CCM2-203ENST00000461377 GRM8O00222 908 aa24.87■■□□□ 1.57
CCM2-203ENST00000461377 MYL6BP14649 208 aa24.87■■□□□ 1.57
CCM2-203ENST00000461377 RIC3Q7Z5B4 369 aa24.87■■□□□ 1.57
CCM2-203ENST00000461377 IL1RAPL2Q9NP60 686 aa24.86■■□□□ 1.57
CCM2-203ENST00000461377 ERVV-2B6SEH9 535 aa24.85■■□□□ 1.57
CCM2-203ENST00000461377 IGKV5-2P06315 115 aa24.85■■□□□ 1.57
CCM2-203ENST00000461377 COPS6Q7L5N1 327 aa24.85■■□□□ 1.57
CCM2-203ENST00000461377 LAMB4A4D0S4 1761 aa24.85■■□□□ 1.57
CCM2-203ENST00000461377 FRAT2O75474 233 aaPredicted RBP24.84■■□□□ 1.57
CCM2-203ENST00000461377 DEKP35659 375 aaKnown RBP24.84■■□□□ 1.57
CCM2-203ENST00000461377 STRN4Q9NRL3 753 aa24.84■■□□□ 1.57
CCM2-203ENST00000461377 SHANK3Q9BYB0 1731 aa24.84■■□□□ 1.57
CCM2-203ENST00000461377 ERC2O15083 957 aa24.84■■□□□ 1.57
CCM2-203ENST00000461377 METTL22Q9BUU2 404 aaPredicted RBP24.84■■□□□ 1.57
CCM2-203ENST00000461377 REC8O95072 547 aa24.83■■□□□ 1.57
CCM2-203ENST00000461377 SPRYD3Q8NCJ5 442 aa24.83■■□□□ 1.57
CCM2-203ENST00000461377 SUCLG2Q96I99 432 aa24.83■■□□□ 1.57
CCM2-203ENST00000461377 EVA1CP58658 441 aa24.82■■□□□ 1.56
CCM2-203ENST00000461377 NEXNQ0ZGT2 675 aa24.82■■□□□ 1.56
CCM2-203ENST00000461377 NEURL1BA8MQ27 555 aa24.82■■□□□ 1.56
CCM2-203ENST00000461377 NUTM1Q86Y26 1132 aa24.82■■□□□ 1.56
CCM2-203ENST00000461377 KAZALD1Q96I82 304 aa24.82■■□□□ 1.56
CCM2-203ENST00000461377 PAPPAQ13219 1627 aa24.81■■□□□ 1.56
CCM2-203ENST00000461377 ANKRD13DQ6ZTN6 518 aa24.81■■□□□ 1.56
CCM2-203ENST00000461377 RBM42Q9BTD8 480 aaKnown RBP24.81■■□□□ 1.56
CCM2-203ENST00000461377 UBR2Q8IWV8 1755 aa24.81■■□□□ 1.56
CCM2-203ENST00000461377 ERBB4Q15303 1308 aa24.8■■□□□ 1.56
CCM2-203ENST00000461377 RABEP1Q15276 862 aa24.8■■□□□ 1.56
CCM2-203ENST00000461377 MYD88Q99836 296 aa24.8■■□□□ 1.56
CCM2-203ENST00000461377 CHMP5Q9NZZ3 219 aa24.8■■□□□ 1.56
CCM2-203ENST00000461377 KCPQ6ZWJ8 1503 aa24.8■■□□□ 1.56
CCM2-203ENST00000461377 CD2BP2O95400 341 aaKnown RBP24.79■■□□□ 1.56
CCM2-203ENST00000461377 GCKRQ14397 625 aa24.79■■□□□ 1.56
CCM2-203ENST00000461377 PI4K2BQ8TCG2 481 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms