RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 PPP1R9BQ96SB3 815 aa17.18■□□□□ 0.34
NCL-207ENST00000461347 TTC21BQ7Z4L5 1316 aa17.18■□□□□ 0.34
NCL-207ENST00000461347 E9PCH4 1651 aa17.18■□□□□ 0.34
NCL-207ENST00000461347 ZSCAN22P10073 491 aaPredicted RBP17.18■□□□□ 0.34
NCL-207ENST00000461347 HOMER1Q86YM7 354 aa17.18■□□□□ 0.34
NCL-207ENST00000461347 DDX11Q96FC9 970 aa17.18■□□□□ 0.34
NCL-207ENST00000461347 HIP1O00291 1037 aa17.18■□□□□ 0.34
NCL-207ENST00000461347 ATP8B2P98198 1209 aa17.18■□□□□ 0.34
NCL-207ENST00000461347 KINO60870 393 aaKnown RBP17.17■□□□□ 0.34
NCL-207ENST00000461347 BOLA2Q9H3K6 86 aa17.17■□□□□ 0.34
NCL-207ENST00000461347 CPLX1O14810 134 aa17.17■□□□□ 0.34
NCL-207ENST00000461347 NECAB1Q8N987 351 aa17.17■□□□□ 0.34
NCL-207ENST00000461347 TTC5Q8N0Z6 440 aa17.17■□□□□ 0.34
NCL-207ENST00000461347 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
NCL-207ENST00000461347 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
NCL-207ENST00000461347 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
NCL-207ENST00000461347 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
NCL-207ENST00000461347 FILIP1Q7Z7B0 1213 aa17.16■□□□□ 0.34
NCL-207ENST00000461347 PDCL2Q8N4E4 241 aa17.16■□□□□ 0.34
NCL-207ENST00000461347 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
NCL-207ENST00000461347 DNAAF4Q8WXU2 420 aa17.16■□□□□ 0.34
NCL-207ENST00000461347 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
NCL-207ENST00000461347 CHL1O00533 1208 aa17.16■□□□□ 0.34
NCL-207ENST00000461347 NOLC1Q14978 699 aaKnown RBP eCLIP17.16■□□□□ 0.345e-7■■■■■ 37.9
NCL-207ENST00000461347 CPA1P15085 419 aa17.15■□□□□ 0.34
NCL-207ENST00000461347 GPT2Q8TD30 523 aa17.15■□□□□ 0.34
NCL-207ENST00000461347 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
NCL-207ENST00000461347 ANKRD1Q15327 319 aa17.15■□□□□ 0.34
NCL-207ENST00000461347 LAMC1P11047 1609 aa17.15■□□□□ 0.34
NCL-207ENST00000461347 NEO1Q92859 1461 aa17.15■□□□□ 0.34
NCL-207ENST00000461347 DNM1Q05193 864 aaKnown RBP17.15■□□□□ 0.34
NCL-207ENST00000461347 PLEKHO1Q53GL0 409 aaPredicted RBP17.15■□□□□ 0.34
NCL-207ENST00000461347 CCDC112Q8NEF3 446 aa17.15■□□□□ 0.34
NCL-207ENST00000461347 INTS4Q96HW7 963 aaKnown RBP17.14■□□□□ 0.34
NCL-207ENST00000461347 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
NCL-207ENST00000461347 PDE4CQ08493 712 aa17.14■□□□□ 0.33
NCL-207ENST00000461347 SH2B1Q9NRF2 756 aaPredicted RBP17.14■□□□□ 0.33
NCL-207ENST00000461347 TOMM22Q9NS69 142 aa17.14■□□□□ 0.33
NCL-207ENST00000461347 GADD45BO75293 160 aaPredicted RBP17.14■□□□□ 0.33
NCL-207ENST00000461347 UVSSAQ2YD98 709 aa17.14■□□□□ 0.33
NCL-207ENST00000461347 NEURL4Q96JN8 1562 aa17.13■□□□□ 0.33
NCL-207ENST00000461347 MYL6BP14649 208 aa17.13■□□□□ 0.33
NCL-207ENST00000461347 AK2P54819 239 aa17.13■□□□□ 0.33
NCL-207ENST00000461347 CCAR2Q8N163 923 aaKnown RBP17.13■□□□□ 0.33
NCL-207ENST00000461347 PALD1Q9ULE6 856 aa17.13■□□□□ 0.33
NCL-207ENST00000461347 FAM177BA6PVY3 158 aa17.13■□□□□ 0.33
NCL-207ENST00000461347 C16orf45Q96MC5 204 aaPredicted RBP17.13■□□□□ 0.33
NCL-207ENST00000461347 ECHDC1Q9NTX5 307 aa17.13■□□□□ 0.33
NCL-207ENST00000461347 ABCA6Q8N139 1617 aa17.13■□□□□ 0.33
NCL-207ENST00000461347 HECW2Q9P2P5 1572 aa17.13■□□□□ 0.33
NCL-207ENST00000461347 RTL1A6NKG5 1358 aa17.12■□□□□ 0.33
NCL-207ENST00000461347 ME1P48163 572 aa17.12■□□□□ 0.33
NCL-207ENST00000461347 REREQ9P2R6 1566 aa17.12■□□□□ 0.33
NCL-207ENST00000461347 C17orf53Q8N3J3 647 aaPredicted RBP17.12■□□□□ 0.33
NCL-207ENST00000461347 F13A1P00488 732 aa17.12■□□□□ 0.33
NCL-207ENST00000461347 SYT1P21579 422 aa17.12■□□□□ 0.33
NCL-207ENST00000461347 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
NCL-207ENST00000461347 KIF2CQ99661 725 aa17.11■□□□□ 0.33
NCL-207ENST00000461347 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
NCL-207ENST00000461347 ZHX1Q9UKY1 873 aaPredicted RBP17.11■□□□□ 0.33
NCL-207ENST00000461347 KDM4AO75164 1064 aa17.11■□□□□ 0.33
NCL-207ENST00000461347 SMC2O95347 1197 aa17.11■□□□□ 0.33
NCL-207ENST00000461347 MPRIPQ6WCQ1 1025 aa17.11■□□□□ 0.33
NCL-207ENST00000461347 BRD1O95696 1058 aa17.11■□□□□ 0.33
NCL-207ENST00000461347 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
NCL-207ENST00000461347 SYNE3Q6ZMZ3 975 aa17.11■□□□□ 0.33
NCL-207ENST00000461347 SCAND2PQ9GZW5 306 aaPredicted RBP17.11■□□□□ 0.33
NCL-207ENST00000461347 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
NCL-207ENST00000461347 KIF1BO60333 1816 aa17.1■□□□□ 0.33
NCL-207ENST00000461347 PIK3R4Q99570 1358 aa17.1■□□□□ 0.33
NCL-207ENST00000461347 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
NCL-207ENST00000461347 CREBRFQ8IUR6 639 aa17.1■□□□□ 0.33
NCL-207ENST00000461347 TET3O43151 1660 aa17.1■□□□□ 0.33
NCL-207ENST00000461347 SPDYE4A6NLX3 237 aa17.1■□□□□ 0.33
NCL-207ENST00000461347 PRIMPOLQ96LW4 560 aa17.1■□□□□ 0.33
NCL-207ENST00000461347 MLH3Q9UHC1 1453 aa17.09■□□□□ 0.33
NCL-207ENST00000461347 NAT10Q9H0A0 1025 aaKnown RBP17.09■□□□□ 0.33
NCL-207ENST00000461347 PHAXQ9H814 394 aaKnown RBP17.09■□□□□ 0.33
NCL-207ENST00000461347 PPFIA3O75145 1194 aa17.09■□□□□ 0.33
NCL-207ENST00000461347 APPP05067 770 aa17.09■□□□□ 0.33
NCL-207ENST00000461347 PPP4R3BQ5MIZ7 849 aa17.09■□□□□ 0.33
NCL-207ENST00000461347 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
NCL-207ENST00000461347 EYA1Q99502 592 aa17.09■□□□□ 0.33
NCL-207ENST00000461347 SOS1Q07889 1333 aaPredicted RBP17.09■□□□□ 0.33
NCL-207ENST00000461347 POGZQ7Z3K3 1410 aa17.08■□□□□ 0.33
NCL-207ENST00000461347 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.33
NCL-207ENST00000461347 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.32
NCL-207ENST00000461347 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.32
NCL-207ENST00000461347 LMTK2Q8IWU2 1503 aa17.08■□□□□ 0.32
NCL-207ENST00000461347 CEP152O94986 1710 aa17.08■□□□□ 0.32
NCL-207ENST00000461347 STK38Q15208 465 aa17.08■□□□□ 0.32
NCL-207ENST00000461347 CPLX2Q6PUV4 134 aaKnown RBP17.08■□□□□ 0.32
NCL-207ENST00000461347 SPHKAPQ2M3C7 1700 aa17.08■□□□□ 0.32
NCL-207ENST00000461347 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.32
NCL-207ENST00000461347 CFAP45Q9UL16 551 aa17.07■□□□□ 0.32
NCL-207ENST00000461347 PA2G4Q9UQ80 394 aaKnown RBP17.07■□□□□ 0.32
NCL-207ENST00000461347 ZNF165P49910 485 aa17.07■□□□□ 0.32
NCL-207ENST00000461347 TSC1Q92574 1164 aa17.07■□□□□ 0.32
NCL-207ENST00000461347 ZNF853P0CG23 659 aa17.07■□□□□ 0.32
NCL-207ENST00000461347 RALYLQ86SE5 291 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms