RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 CCDC87Q9NVE4 849 aa11.88□□□□□ -0.51
SOX2-OT-202ENST00000461063 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
SOX2-OT-202ENST00000461063 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
SOX2-OT-202ENST00000461063 USP42Q9H9J4 1324 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-202ENST00000461063 CEP350Q5VT06 3117 aa11.87□□□□□ -0.51
SOX2-OT-202ENST00000461063 TJP1Q07157 1748 aa11.87□□□□□ -0.51
SOX2-OT-202ENST00000461063 SLC39A6Q13433 755 aa11.87□□□□□ -0.51
SOX2-OT-202ENST00000461063 FKBP8Q14318 412 aa11.87□□□□□ -0.51
SOX2-OT-202ENST00000461063 SCN11AQ9UI33 1791 aa11.87□□□□□ -0.51
SOX2-OT-202ENST00000461063 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
SOX2-OT-202ENST00000461063 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 U2SURPO15042 1029 aaKnown RBP11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 CYP19A1P11511 503 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 DPEP1P16444 411 aa11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 DDR1Q08345 913 aa11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 SSUH2Q9Y2M2 353 aa11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 KIAA1551Q9HCM1 1747 aa11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
SOX2-OT-202ENST00000461063 ADAMTS7Q9UKP4 1686 aa11.85□□□□□ -0.51
SOX2-OT-202ENST00000461063 KCNA3P22001 575 aa11.85□□□□□ -0.51
SOX2-OT-202ENST00000461063 ZNF526Q8TF50 670 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-202ENST00000461063 KIF13BQ9NQT8 1826 aa11.85□□□□□ -0.51
SOX2-OT-202ENST00000461063 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-202ENST00000461063 TM4SF1P30408 202 aa11.84□□□□□ -0.51
SOX2-OT-202ENST00000461063 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
SOX2-OT-202ENST00000461063 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-202ENST00000461063 ZPR1O75312 459 aa11.83□□□□□ -0.52
SOX2-OT-202ENST00000461063 FCHSD2O94868 740 aa11.83□□□□□ -0.52
SOX2-OT-202ENST00000461063 USPL1Q5W0Q7 1092 aa11.83□□□□□ -0.52
SOX2-OT-202ENST00000461063 IL17REQ8NFR9 667 aa11.83□□□□□ -0.52
SOX2-OT-202ENST00000461063 ZBTB1Q9Y2K1 713 aa11.83□□□□□ -0.52
SOX2-OT-202ENST00000461063 GNAT3A8MTJ3 354 aa11.82□□□□□ -0.52
SOX2-OT-202ENST00000461063 ARHGAP27Q6ZUM4 889 aa11.82□□□□□ -0.52
SOX2-OT-202ENST00000461063 GAS2L2Q8NHY3 880 aa11.82□□□□□ -0.52
SOX2-OT-202ENST00000461063 SP7Q8TDD2 431 aaPredicted RBP11.82□□□□□ -0.52
SOX2-OT-202ENST00000461063 NARFQ9UHQ1 456 aa11.82□□□□□ -0.52
SOX2-OT-202ENST00000461063 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
SOX2-OT-202ENST00000461063 COL15A1P39059 1388 aa11.81□□□□□ -0.52
SOX2-OT-202ENST00000461063 TEFQ10587 303 aa11.81□□□□□ -0.52
SOX2-OT-202ENST00000461063 TTC5Q8N0Z6 440 aa11.81□□□□□ -0.52
SOX2-OT-202ENST00000461063 PHACTR3Q96KR7 559 aa11.81□□□□□ -0.52
SOX2-OT-202ENST00000461063 BCL2L12Q9HB09 334 aa11.81□□□□□ -0.52
SOX2-OT-202ENST00000461063 PIM2Q9P1W9 311 aa11.81□□□□□ -0.52
SOX2-OT-202ENST00000461063 STARD3NLO95772 234 aa11.8□□□□□ -0.52
SOX2-OT-202ENST00000461063 CANXP27824 592 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-202ENST00000461063 CHRNA5P30532 468 aa11.8□□□□□ -0.52
SOX2-OT-202ENST00000461063 NFIXQ14938 502 aa11.8□□□□□ -0.52
SOX2-OT-202ENST00000461063 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-202ENST00000461063 ZNF790Q6PG37 636 aa11.8□□□□□ -0.52
SOX2-OT-202ENST00000461063 ZNF496Q96IT1 587 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-202ENST00000461063 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
SOX2-OT-202ENST00000461063 RSPH6AQ9H0K4 717 aa11.8□□□□□ -0.52
SOX2-OT-202ENST00000461063 KIF3CO14782 793 aa11.79□□□□□ -0.52
SOX2-OT-202ENST00000461063 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
SOX2-OT-202ENST00000461063 PRKAR2BP31323 418 aa11.79□□□□□ -0.52
SOX2-OT-202ENST00000461063 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-202ENST00000461063 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
SOX2-OT-202ENST00000461063 UBR2Q8IWV8 1755 aa11.79□□□□□ -0.52
SOX2-OT-202ENST00000461063 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
SOX2-OT-202ENST00000461063 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
SOX2-OT-202ENST00000461063 SPDYE1Q8NFV5 336 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-202ENST00000461063 TEX13AQ9BXU3 409 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-202ENST00000461063 A0A087WZG4 1122 aa11.77□□□□□ -0.53
SOX2-OT-202ENST00000461063 HAX1O00165 279 aa11.77□□□□□ -0.53
SOX2-OT-202ENST00000461063 SERPINB2P05120 415 aa11.77□□□□□ -0.53
SOX2-OT-202ENST00000461063 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
SOX2-OT-202ENST00000461063 FMNL2Q96PY5 1086 aa11.77□□□□□ -0.53
SOX2-OT-202ENST00000461063 NUDCQ9Y266 331 aa11.77□□□□□ -0.53
SOX2-OT-202ENST00000461063 BRCA1P38398 1863 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-202ENST00000461063 BTBD11A6QL63 1104 aa11.76□□□□□ -0.53
SOX2-OT-202ENST00000461063 KCNQ3O43525 872 aa11.76□□□□□ -0.53
SOX2-OT-202ENST00000461063 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
SOX2-OT-202ENST00000461063 HSPA6P17066 643 aa11.76□□□□□ -0.53
SOX2-OT-202ENST00000461063 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
SOX2-OT-202ENST00000461063 VIRMAQ69YN4 1812 aaKnown RBP11.75□□□□□ -0.53
SOX2-OT-202ENST00000461063 IL6STP40189 918 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-202ENST00000461063 BICDL1Q6ZP65 573 aa11.75□□□□□ -0.53
SOX2-OT-202ENST00000461063 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 A1BGP04217 495 aa11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 TBC1D9BQ66K14 1250 aa11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 MCM10Q7L590 875 aa11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 NMRK2Q9NPI5 230 aa11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 RNF181Q9P0P0 153 aa11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 TBC1D2BQ9UPU7 963 aa11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 CARMIL3Q8ND23 1372 aa11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 NRXN2Q9P2S2 1712 aa11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 ARFGEF1Q9Y6D6 1849 aa11.74□□□□□ -0.53
SOX2-OT-202ENST00000461063 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
SOX2-OT-202ENST00000461063 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
SOX2-OT-202ENST00000461063 USP16Q9Y5T5 823 aa11.73□□□□□ -0.53
SOX2-OT-202ENST00000461063 H0YIN7 160 aa11.72□□□□□ -0.53
SOX2-OT-202ENST00000461063 TOMM70O94826 608 aa11.72□□□□□ -0.53
SOX2-OT-202ENST00000461063 CAMTA2O94983 1202 aa11.72□□□□□ -0.53
SOX2-OT-202ENST00000461063 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
SOX2-OT-202ENST00000461063 TTLL6Q8N841 843 aa11.72□□□□□ -0.53
SOX2-OT-202ENST00000461063 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
SOX2-OT-202ENST00000461063 PRAMEF22A3QJZ6 481 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms