RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 SMARCC1Q92922 1105 aaPredicted RBP13.91□□□□□ -0.18
CSDC2-202ENST00000460790 CHPF2Q9P2E5 772 aa13.91□□□□□ -0.18
CSDC2-202ENST00000460790 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
CSDC2-202ENST00000460790 TNNQ9UQP3 1299 aa13.91□□□□□ -0.18
CSDC2-202ENST00000460790 NHSQ6T4R5 1651 aa13.91□□□□□ -0.18
CSDC2-202ENST00000460790 LAMB4A4D0S4 1761 aa13.91□□□□□ -0.18
CSDC2-202ENST00000460790 PTPRCP08575 1304 aa13.9□□□□□ -0.18
CSDC2-202ENST00000460790 BTAF1O14981 1849 aa13.9□□□□□ -0.18
CSDC2-202ENST00000460790 PDIA6Q15084 440 aa13.9□□□□□ -0.18
CSDC2-202ENST00000460790 PANK1Q8TE04 598 aa13.9□□□□□ -0.18
CSDC2-202ENST00000460790 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
CSDC2-202ENST00000460790 API5Q9BZZ5 524 aaKnown RBP13.9□□□□□ -0.18
CSDC2-202ENST00000460790 DDX21Q9NR30 783 aaKnown RBP eCLIP13.9□□□□□ -0.18
CSDC2-202ENST00000460790 RLBP1P12271 317 aa13.89□□□□□ -0.19
CSDC2-202ENST00000460790 FLIIQ13045 1269 aa13.89□□□□□ -0.19
CSDC2-202ENST00000460790 PTF1AQ7RTS3 328 aa13.89□□□□□ -0.19
CSDC2-202ENST00000460790 CLUAP1Q96AJ1 413 aa13.89□□□□□ -0.19
CSDC2-202ENST00000460790 SLC4A9Q96Q91 983 aa13.89□□□□□ -0.19
CSDC2-202ENST00000460790 CRBNQ96SW2 442 aa13.89□□□□□ -0.19
CSDC2-202ENST00000460790 HYPKQ9NX55 129 aa13.89□□□□□ -0.19
CSDC2-202ENST00000460790 DNAJC10Q8IXB1 793 aa13.88□□□□□ -0.19
CSDC2-202ENST00000460790 EXOC6Q8TAG9 804 aa13.88□□□□□ -0.19
CSDC2-202ENST00000460790 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
CSDC2-202ENST00000460790 PHAXQ9H814 394 aaKnown RBP13.88□□□□□ -0.19
CSDC2-202ENST00000460790 ERBB4Q15303 1308 aa13.88□□□□□ -0.19
CSDC2-202ENST00000460790 LOC102724428A0A0B4J2F2 783 aa13.87□□□□□ -0.19
CSDC2-202ENST00000460790 STARD3NLO95772 234 aa13.87□□□□□ -0.19
CSDC2-202ENST00000460790 ANXA1P04083 346 aa13.87□□□□□ -0.19
CSDC2-202ENST00000460790 SIK1P57059 783 aa13.87□□□□□ -0.19
CSDC2-202ENST00000460790 PROSER3Q2NL68 480 aa13.87□□□□□ -0.19
CSDC2-202ENST00000460790 FTSJ3Q8IY81 847 aaKnown RBP13.87□□□□□ -0.19
CSDC2-202ENST00000460790 COG6Q9Y2V7 657 aa13.87□□□□□ -0.19
CSDC2-202ENST00000460790 RGS12O14924 1447 aa13.87□□□□□ -0.19
CSDC2-202ENST00000460790 ABCC4O15439 1325 aa13.87□□□□□ -0.19
CSDC2-202ENST00000460790 PALLDQ8WX93 1383 aa13.86□□□□□ -0.19
CSDC2-202ENST00000460790 ZNF831Q5JPB2 1677 aa13.86□□□□□ -0.19
CSDC2-202ENST00000460790 LRP10Q7Z4F1 713 aa13.86□□□□□ -0.19
CSDC2-202ENST00000460790 TMEM57Q8N5G2 664 aa13.86□□□□□ -0.19
CSDC2-202ENST00000460790 TJP1Q07157 1748 aa13.85□□□□□ -0.19
CSDC2-202ENST00000460790 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
CSDC2-202ENST00000460790 A1BGP04217 495 aa13.85□□□□□ -0.19
CSDC2-202ENST00000460790 CYP19A1P11511 503 aaPredicted RBP13.85□□□□□ -0.19
CSDC2-202ENST00000460790 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
CSDC2-202ENST00000460790 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
CSDC2-202ENST00000460790 MVPQ14764 893 aaKnown RBP13.85□□□□□ -0.19
CSDC2-202ENST00000460790 NBPF14Q5TI25 921 aa13.85□□□□□ -0.19
CSDC2-202ENST00000460790 NBPF10Q6P3W6 841 aaKnown RBP13.85□□□□□ -0.19
CSDC2-202ENST00000460790 NBPF15Q8N660 670 aa13.85□□□□□ -0.19
CSDC2-202ENST00000460790 CICQ96RK0 1608 aaPredicted RBP13.84□□□□□ -0.19
CSDC2-202ENST00000460790 MYL6BP14649 208 aa13.84□□□□□ -0.19
CSDC2-202ENST00000460790 LY75O60449 1722 aa13.84□□□□□ -0.19
CSDC2-202ENST00000460790 MYH14Q7Z406 1995 aaKnown RBP13.83□□□□□ -0.19
CSDC2-202ENST00000460790 F6X3S4 739 aa13.83□□□□□ -0.2
CSDC2-202ENST00000460790 TRIM37O94972 964 aa13.83□□□□□ -0.2
CSDC2-202ENST00000460790 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
CSDC2-202ENST00000460790 ITPK1Q13572 414 aa13.83□□□□□ -0.2
CSDC2-202ENST00000460790 INTS3Q68E01 1043 aaKnown RBP13.83□□□□□ -0.2
CSDC2-202ENST00000460790 COPS6Q7L5N1 327 aa13.83□□□□□ -0.2
CSDC2-202ENST00000460790 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.2
CSDC2-202ENST00000460790 PI4KAP2A4QPH2 592 aa13.82□□□□□ -0.2
CSDC2-202ENST00000460790 AAMPQ13685 434 aa13.82□□□□□ -0.2
CSDC2-202ENST00000460790 KSR2Q6VAB6 950 aa13.82□□□□□ -0.2
CSDC2-202ENST00000460790 ITPRIPQ8IWB1 547 aa13.82□□□□□ -0.2
CSDC2-202ENST00000460790 PI4KAP1Q8N8J0 262 aa13.82□□□□□ -0.2
CSDC2-202ENST00000460790 XAGE3Q8WTP9 111 aa13.82□□□□□ -0.2
CSDC2-202ENST00000460790 DDX19BQ9UMR2 479 aa13.82□□□□□ -0.2
CSDC2-202ENST00000460790 DDX58O95786 925 aaKnown RBP13.81□□□□□ -0.2
CSDC2-202ENST00000460790 CCT4P50991 539 aaKnown RBP13.81□□□□□ -0.2
CSDC2-202ENST00000460790 AIMP1Q12904 312 aaKnown RBP13.81□□□□□ -0.2
CSDC2-202ENST00000460790 DNAAF4Q8WXU2 420 aa13.81□□□□□ -0.2
CSDC2-202ENST00000460790 ADCY9O60503 1353 aa13.81□□□□□ -0.2
CSDC2-202ENST00000460790 COL5A3P25940 1745 aaPredicted RBP13.81□□□□□ -0.2
CSDC2-202ENST00000460790 ZBTB7BO15156 539 aaPredicted RBP13.8□□□□□ -0.2
CSDC2-202ENST00000460790 INTS5Q6P9B9 1019 aaKnown RBP13.8□□□□□ -0.2
CSDC2-202ENST00000460790 SLC4A10Q6U841 1118 aa13.8□□□□□ -0.2
CSDC2-202ENST00000460790 ANKRD13DQ6ZTN6 518 aa13.8□□□□□ -0.2
CSDC2-202ENST00000460790 CHMP4BQ9H444 224 aaKnown RBP13.8□□□□□ -0.2
CSDC2-202ENST00000460790 N4BP2Q86UW6 1770 aaPredicted RBP13.8□□□□□ -0.2
CSDC2-202ENST00000460790 TAF1LQ8IZX4 1826 aa13.8□□□□□ -0.2
CSDC2-202ENST00000460790 CRKLP46109 303 aaKnown RBP13.79□□□□□ -0.2
CSDC2-202ENST00000460790 CCDC87Q9NVE4 849 aa13.79□□□□□ -0.2
CSDC2-202ENST00000460790 CCNL1Q9UK58 526 aaPredicted RBP13.79□□□□□ -0.2
CSDC2-202ENST00000460790 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
CSDC2-202ENST00000460790 MAP3K2Q9Y2U5 619 aa13.79□□□□□ -0.2
CSDC2-202ENST00000460790 RREB1Q92766 1687 aa13.79□□□□□ -0.2
CSDC2-202ENST00000460790 IL6STP40189 918 aaPredicted RBP13.78□□□□□ -0.2
CSDC2-202ENST00000460790 BEND3Q5T5X7 828 aa13.78□□□□□ -0.2
CSDC2-202ENST00000460790 RC3H1Q5TC82 1133 aaKnown RBP13.78□□□□□ -0.2
CSDC2-202ENST00000460790 TTLL7Q6ZT98 887 aa13.78□□□□□ -0.2
CSDC2-202ENST00000460790 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
CSDC2-202ENST00000460790 LINC00116Q8NCU8 138 aa13.78□□□□□ -0.2
CSDC2-202ENST00000460790 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
CSDC2-202ENST00000460790 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
CSDC2-202ENST00000460790 PXDNLA1KZ92 1463 aa13.78□□□□□ -0.2
CSDC2-202ENST00000460790 PLSCR1O15162 318 aa13.77□□□□□ -0.21
CSDC2-202ENST00000460790 EIF5P55010 431 aaKnown RBP13.77□□□□□ -0.21
CSDC2-202ENST00000460790 KCNQ4P56696 695 aa13.77□□□□□ -0.21
CSDC2-202ENST00000460790 METTL22Q9BUU2 404 aaPredicted RBP13.77□□□□□ -0.21
CSDC2-202ENST00000460790 SRCIN1Q9C0H9 1055 aa13.77□□□□□ -0.21
CSDC2-202ENST00000460790 ARFGEF2Q9Y6D5 1785 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms