RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 UQCRHP07919 91 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 ANTXR1Q9H6X2 564 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 KIAA0232Q92628 1395 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 MAP3K2Q9Y2U5 619 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 YEATS2Q9ULM3 1422 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 ABCA6Q8N139 1617 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 FERMT3Q86UX7 667 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 FBXW7Q969H0 707 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 ABCC3O15438 1527 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 DHX16O60231 1041 aaKnown RBP14.31□□□□□ -0.12
CPNE6-202ENST00000460657 MCM5P33992 734 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 AKAP17AQ02040 695 aaKnown RBP14.31□□□□□ -0.12
CPNE6-202ENST00000460657 MAP3K11Q16584 847 aa14.31□□□□□ -0.12
CPNE6-202ENST00000460657 CCDC8Q9H0W5 538 aaPredicted RBP14.31□□□□□ -0.12
CPNE6-202ENST00000460657 CEBPZQ03701 1054 aaKnown RBP14.3□□□□□ -0.12
CPNE6-202ENST00000460657 NFXL1Q6ZNB6 911 aa14.3□□□□□ -0.12
CPNE6-202ENST00000460657 CHPF2Q9P2E5 772 aa14.3□□□□□ -0.12
CPNE6-202ENST00000460657 CFAP45Q9UL16 551 aa14.3□□□□□ -0.12
CPNE6-202ENST00000460657 HECW2Q9P2P5 1572 aa14.3□□□□□ -0.12
CPNE6-202ENST00000460657 CHMLP26374 656 aa14.3□□□□□ -0.12
CPNE6-202ENST00000460657 ZC3H6P61129 1189 aaKnown RBP14.3□□□□□ -0.12
CPNE6-202ENST00000460657 DDX54Q8TDD1 881 aaKnown RBP14.3□□□□□ -0.12
CPNE6-202ENST00000460657 SIRT1Q96EB6 747 aa14.3□□□□□ -0.12
CPNE6-202ENST00000460657 ANXA1P04083 346 aa14.29□□□□□ -0.12
CPNE6-202ENST00000460657 INTS4Q96HW7 963 aaKnown RBP14.29□□□□□ -0.12
CPNE6-202ENST00000460657 LARP6Q9BRS8 491 aaKnown RBP14.29□□□□□ -0.12
CPNE6-202ENST00000460657 AATKQ6ZMQ8 1374 aa14.29□□□□□ -0.12
CPNE6-202ENST00000460657 MAP3K5Q99683 1374 aa14.29□□□□□ -0.12
CPNE6-202ENST00000460657 SCAND2PQ9GZW5 306 aaPredicted RBP14.29□□□□□ -0.12
CPNE6-202ENST00000460657 ATP7BP35670 1465 aa14.29□□□□□ -0.12
CPNE6-202ENST00000460657 CCDC158Q5M9N0 1113 aa14.29□□□□□ -0.12
CPNE6-202ENST00000460657 GSPT1P15170 499 aaKnown RBP14.29□□□□□ -0.12
CPNE6-202ENST00000460657 HOOK1Q9UJC3 728 aaKnown RBP14.29□□□□□ -0.12
CPNE6-202ENST00000460657 FAM135BQ49AJ0 1406 aa14.28□□□□□ -0.12
CPNE6-202ENST00000460657 SBNO1A3KN83 1393 aa14.28□□□□□ -0.12
CPNE6-202ENST00000460657 UBE2HP62256 183 aa14.28□□□□□ -0.12
CPNE6-202ENST00000460657 GJB2P29033 226 aa14.28□□□□□ -0.12
CPNE6-202ENST00000460657 ZSCAN22P10073 491 aaPredicted RBP14.28□□□□□ -0.12
CPNE6-202ENST00000460657 MYD88Q99836 296 aa14.28□□□□□ -0.12
CPNE6-202ENST00000460657 RRAGDQ9NQL2 400 aaPredicted RBP14.28□□□□□ -0.12
CPNE6-202ENST00000460657 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.12
CPNE6-202ENST00000460657 STK38Q15208 465 aa14.27□□□□□ -0.12
CPNE6-202ENST00000460657 USP25Q9UHP3 1055 aa14.27□□□□□ -0.12
CPNE6-202ENST00000460657 SETBP1Q9Y6X0 1596 aa14.27□□□□□ -0.12
CPNE6-202ENST00000460657 ALDH1L1O75891 902 aa14.27□□□□□ -0.12
CPNE6-202ENST00000460657 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.12
CPNE6-202ENST00000460657 SAFBQ15424 915 aaKnown RBP eCLIP14.27□□□□□ -0.13
CPNE6-202ENST00000460657 UVSSAQ2YD98 709 aa14.27□□□□□ -0.13
CPNE6-202ENST00000460657 ADGRB3O60242 1522 aa14.27□□□□□ -0.13
CPNE6-202ENST00000460657 PLEKHG3A1L390 1219 aa14.27□□□□□ -0.13
CPNE6-202ENST00000460657 TTC39AQ5SRH9 613 aa14.27□□□□□ -0.13
CPNE6-202ENST00000460657 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.13
CPNE6-202ENST00000460657 ME1P48163 572 aa14.26□□□□□ -0.13
CPNE6-202ENST00000460657 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
CPNE6-202ENST00000460657 RTL1A6NKG5 1358 aa14.26□□□□□ -0.13
CPNE6-202ENST00000460657 ZNF853P0CG23 659 aa14.26□□□□□ -0.13
CPNE6-202ENST00000460657 GTF2E1P29083 439 aaPredicted RBP14.26□□□□□ -0.13
CPNE6-202ENST00000460657 HOXC9P31274 260 aa14.26□□□□□ -0.13
CPNE6-202ENST00000460657 RASSF8Q8NHQ8 419 aa14.26□□□□□ -0.13
CPNE6-202ENST00000460657 CEP126Q9P2H0 1117 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 TTC41PQ6P2S7 1318 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 RBM33Q96EV2 1170 aaKnown RBP14.25□□□□□ -0.13
CPNE6-202ENST00000460657 DDX11Q96FC9 970 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 TBC1D2BQ9UPU7 963 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 ARHGAP31Q2M1Z3 1444 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 ERICH2A1L162 156 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 USP48Q86UV5 1035 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 TBX22Q9Y458 520 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 CEP152O94986 1710 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 HS1BP3Q53T59 392 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 KIF6Q6ZMV9 814 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 CTNNA3Q9UI47 895 aa14.25□□□□□ -0.13
CPNE6-202ENST00000460657 CAMK4Q16566 473 aa14.24□□□□□ -0.13
CPNE6-202ENST00000460657 CCDC57Q2TAC2 916 aa14.24□□□□□ -0.13
CPNE6-202ENST00000460657 GLI2P10070 1586 aa14.24□□□□□ -0.13
CPNE6-202ENST00000460657 ARHGEF10O15013 1369 aa14.24□□□□□ -0.13
CPNE6-202ENST00000460657 IQGAP1P46940 1657 aa14.24□□□□□ -0.13
CPNE6-202ENST00000460657 KSR2Q6VAB6 950 aa14.24□□□□□ -0.13
CPNE6-202ENST00000460657 U3KPZ7 1027 aaPredicted RBP14.24□□□□□ -0.13
CPNE6-202ENST00000460657 SYTL4Q96C24 671 aaPredicted RBP14.23□□□□□ -0.13
CPNE6-202ENST00000460657 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPNE6-202ENST00000460657 PHAXQ9H814 394 aaKnown RBP14.23□□□□□ -0.13
CPNE6-202ENST00000460657 LMTK2Q8IWU2 1503 aa14.23□□□□□ -0.13
CPNE6-202ENST00000460657 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPNE6-202ENST00000460657 ANKRD24Q8TF21 1146 aa14.23□□□□□ -0.13
CPNE6-202ENST00000460657 HMG20BQ9P0W2 317 aa14.23□□□□□ -0.13
CPNE6-202ENST00000460657 AOX1Q06278 1338 aa14.23□□□□□ -0.13
CPNE6-202ENST00000460657 CREBRFQ8IUR6 639 aa14.23□□□□□ -0.13
CPNE6-202ENST00000460657 CNPY2Q9Y2B0 182 aa14.23□□□□□ -0.13
CPNE6-202ENST00000460657 ZNF445P59923 1031 aa14.23□□□□□ -0.13
CPNE6-202ENST00000460657 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
CPNE6-202ENST00000460657 TOM1L2Q6ZVM7 507 aa14.23□□□□□ -0.13
CPNE6-202ENST00000460657 QRICH2Q9H0J4 1663 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 ADCY5O95622 1261 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 HMGB1P09429 215 aaKnown RBP14.22□□□□□ -0.13
CPNE6-202ENST00000460657 GRM8O00222 908 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 HCLS1P14317 486 aaPredicted RBP14.22□□□□□ -0.13
CPNE6-202ENST00000460657 DDX19AQ9NUU7 478 aaKnown RBP14.22□□□□□ -0.13
CPNE6-202ENST00000460657 RBM8AQ9Y5S9 174 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms