RNA–Protein interactions for RNA: ENST00000460609.3

RN7SL254P-201, Transcript of RNA, 7SL, cytoplasmic 254, pseudogene, humanhuman

BASIC

Gene RN7SL254P, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL254P-201ENST00000460609 SRP68Q9UHB9 627 aaKnown RBP8.42□□□□□ -1.06
RN7SL254P-201ENST00000460609 NARFQ9UHQ1 456 aa8.42□□□□□ -1.06
RN7SL254P-201ENST00000460609 TJP1Q07157 1748 aa8.42□□□□□ -1.06
RN7SL254P-201ENST00000460609 N4BP2Q86UW6 1770 aaPredicted RBP8.41□□□□□ -1.06
RN7SL254P-201ENST00000460609 KDM2BQ8NHM5 1336 aa8.41□□□□□ -1.06
RN7SL254P-201ENST00000460609 POLRMTO00411 1230 aaKnown RBP8.41□□□□□ -1.06
RN7SL254P-201ENST00000460609 PRELPP51888 382 aa8.41□□□□□ -1.06
RN7SL254P-201ENST00000460609 DDR1Q08345 913 aa8.41□□□□□ -1.06
RN7SL254P-201ENST00000460609 SLC39A6Q13433 755 aa8.41□□□□□ -1.06
RN7SL254P-201ENST00000460609 PDZRN3Q9UPQ7 1066 aa8.41□□□□□ -1.06
RN7SL254P-201ENST00000460609 KCPQ6ZWJ8 1503 aa8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 KIF3CO14782 793 aa8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 TOMM70O94826 608 aa8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 NEFMP07197 916 aa8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 CANXP27824 592 aaKnown RBP8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 TM4SF1P30408 202 aa8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 C9orf131Q5VYM1 1079 aa8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 FMNL2Q96PY5 1086 aa8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 ZBTB1Q9Y2K1 713 aa8.4□□□□□ -1.06
RN7SL254P-201ENST00000460609 KIAA1551Q9HCM1 1747 aa8.4□□□□□ -1.07
RN7SL254P-201ENST00000460609 HEG1Q9ULI3 1381 aa8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 ARFGEF1Q9Y6D6 1849 aa8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 NPHP1O15259 732 aa8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 SERPINB2P05120 415 aa8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 APLP1P51693 650 aa8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 CNGB1Q14028 1251 aaPredicted RBP8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 NFIXQ14938 502 aa8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 ZNF790Q6PG37 636 aa8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 RTF1Q92541 710 aaKnown RBP8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 RNF181Q9P0P0 153 aa8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 ADAMTS7Q9UKP4 1686 aa8.39□□□□□ -1.07
RN7SL254P-201ENST00000460609 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 BRCA1P38398 1863 aaKnown RBP8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 H0YIN7 160 aa8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 KCNA3P22001 575 aa8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 CHRNA5P30532 468 aa8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 IL6STP40189 918 aaPredicted RBP8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 EIF5P55010 431 aaKnown RBP8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 COL13A1Q5TAT6 717 aaPredicted RBP8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 TNS4Q8IZW8 715 aa8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 TTLL6Q8N841 843 aa8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 ZNF330Q9Y3S2 320 aaPredicted RBP8.38□□□□□ -1.07
RN7SL254P-201ENST00000460609 BTBD11A6QL63 1104 aa8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 U2AF1L5P0DN76 240 aaPredicted RBP8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 PRKAR2BP31323 418 aa8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 PDE6BP35913 854 aa8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 U2AF1Q01081 240 aaKnown RBP eCLIP8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 FSTL1Q12841 308 aa8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 C2CD5Q86YS7 1000 aa8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 RBM46Q8TBY0 533 aaKnown RBP8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 ZNF496Q96IT1 587 aaPredicted RBP8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 ZNF652Q9Y2D9 606 aa8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 VIRMAQ69YN4 1812 aaKnown RBP8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 UBR2Q8IWV8 1755 aa8.37□□□□□ -1.07
RN7SL254P-201ENST00000460609 CARMIL3Q8ND23 1372 aa8.36□□□□□ -1.07
RN7SL254P-201ENST00000460609 CEMIPQ8WUJ3 1361 aa8.36□□□□□ -1.07
RN7SL254P-201ENST00000460609 GOLGB1Q14789 3259 aaKnown RBP8.36□□□□□ -1.07
RN7SL254P-201ENST00000460609 ST5P78524 1137 aa8.36□□□□□ -1.07
RN7SL254P-201ENST00000460609 BICDL1Q6ZP65 573 aa8.36□□□□□ -1.07
RN7SL254P-201ENST00000460609 IL17REQ8NFR9 667 aa8.36□□□□□ -1.07
RN7SL254P-201ENST00000460609 SETDB2Q96T68 719 aa8.36□□□□□ -1.07
RN7SL254P-201ENST00000460609 NMRK2Q9NPI5 230 aa8.36□□□□□ -1.07
RN7SL254P-201ENST00000460609 NRXN2Q9P2S2 1712 aa8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 HTATSF1O43719 755 aaKnown RBP8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 SNRPA1P09661 255 aaKnown RBP8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 LMNB1P20700 586 aa8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 CNBD1Q8NA66 436 aa8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 CNKSR1Q969H4 720 aa8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 ZNF622Q969S3 477 aaKnown RBP eCLIP8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 BRIP1Q9BX63 1249 aa8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 RSPH6AQ9H0K4 717 aa8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 PNNQ9H307 717 aaKnown RBP8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 BCL2L12Q9HB09 334 aa8.35□□□□□ -1.07
RN7SL254P-201ENST00000460609 RGL2O15211 777 aa8.34□□□□□ -1.07
RN7SL254P-201ENST00000460609 PPP2R1AP30153 589 aa8.34□□□□□ -1.07
RN7SL254P-201ENST00000460609 TBC1D9BQ66K14 1250 aa8.34□□□□□ -1.07
RN7SL254P-201ENST00000460609 DPY19L2Q6NUT2 758 aa8.34□□□□□ -1.07
RN7SL254P-201ENST00000460609 CLEC4GQ6UXB4 293 aa8.34□□□□□ -1.07
RN7SL254P-201ENST00000460609 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
RN7SL254P-201ENST00000460609 SMC1BQ8NDV3 1235 aa8.34□□□□□ -1.07
RN7SL254P-201ENST00000460609 PNISRQ8TF01 805 aaKnown RBP8.34□□□□□ -1.07
RN7SL254P-201ENST00000460609 TBC1D2BQ9UPU7 963 aa8.34□□□□□ -1.07
RN7SL254P-201ENST00000460609 SCN7AQ01118 1682 aa8.34□□□□□ -1.08
RN7SL254P-201ENST00000460609 AFDNP55196 1824 aaKnown RBP8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 GLTPD2A6NH11 291 aa8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 A1BGP04217 495 aa8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 RASSF7Q02833 373 aa8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 STYK1Q6J9G0 422 aa8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 PRR5LQ6MZQ0 368 aa8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 PHACTR3Q96KR7 559 aa8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 TNRC6CQ9HCJ0 1690 aaKnown RBP8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 SIPA1L3O60292 1781 aaPredicted RBP8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 DLEC1Q9Y238 1755 aa8.33□□□□□ -1.08
RN7SL254P-201ENST00000460609 CAMTA2O94983 1202 aa8.32□□□□□ -1.08
RN7SL254P-201ENST00000460609 VEGFAP15692 232 aaPredicted RBP8.32□□□□□ -1.08
RN7SL254P-201ENST00000460609 NBPF5PQ86XG9 351 aaPredicted RBP8.32□□□□□ -1.08
RN7SL254P-201ENST00000460609 MASTLQ96GX5 879 aa8.32□□□□□ -1.08
RN7SL254P-201ENST00000460609 TAOK3Q9H2K8 898 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms