RNA–Protein interactions for RNA: ENST00000460549.1

ATP2B3-206, Transcript of ATPase plasma membrane Ca2+ transporting 3, humanhuman

TSL 5

Gene ATP2B3, Length 899 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3-206ENST00000460549 PPP2R1AP30153 589 aa18.62■□□□□ 0.57
ATP2B3-206ENST00000460549 ZNF496Q96IT1 587 aaPredicted RBP18.62■□□□□ 0.57
ATP2B3-206ENST00000460549 RSPH6AQ9H0K4 717 aa18.62■□□□□ 0.57
ATP2B3-206ENST00000460549 NARFQ9UHQ1 456 aa18.62■□□□□ 0.57
ATP2B3-206ENST00000460549 COL15A1P39059 1388 aa18.61■□□□□ 0.57
ATP2B3-206ENST00000460549 CHRNA5P30532 468 aa18.61■□□□□ 0.57
ATP2B3-206ENST00000460549 ZNF790Q6PG37 636 aa18.61■□□□□ 0.57
ATP2B3-206ENST00000460549 PIM2Q9P1W9 311 aa18.61■□□□□ 0.57
ATP2B3-206ENST00000460549 NUDCQ9Y266 331 aa18.61■□□□□ 0.57
ATP2B3-206ENST00000460549 STARD3NLO95772 234 aa18.6■□□□□ 0.57
ATP2B3-206ENST00000460549 U2AF1L5P0DN76 240 aaPredicted RBP18.6■□□□□ 0.57
ATP2B3-206ENST00000460549 U2AF1Q01081 240 aaKnown RBP eCLIP18.6■□□□□ 0.57
ATP2B3-206ENST00000460549 NFIXQ14938 502 aa18.6■□□□□ 0.57
ATP2B3-206ENST00000460549 BCL2L12Q9HB09 334 aa18.59■□□□□ 0.57
ATP2B3-206ENST00000460549 ZNF330Q9Y3S2 320 aaPredicted RBP18.59■□□□□ 0.57
ATP2B3-206ENST00000460549 N4BP2Q86UW6 1770 aaPredicted RBP18.59■□□□□ 0.57
ATP2B3-206ENST00000460549 KCNQ3O43525 872 aa18.58■□□□□ 0.56
ATP2B3-206ENST00000460549 DALRD3Q5D0E6 543 aaKnown RBP18.58■□□□□ 0.56
ATP2B3-206ENST00000460549 BICDL1Q6ZP65 573 aa18.58■□□□□ 0.56
ATP2B3-206ENST00000460549 KIAA1551Q9HCM1 1747 aa18.57■□□□□ 0.56
ATP2B3-206ENST00000460549 HEG1Q9ULI3 1381 aa18.57■□□□□ 0.56
ATP2B3-206ENST00000460549 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
ATP2B3-206ENST00000460549 BTBD11A6QL63 1104 aa18.57■□□□□ 0.56
ATP2B3-206ENST00000460549 KIF13BQ9NQT8 1826 aa18.57■□□□□ 0.56
ATP2B3-206ENST00000460549 SERPINB2P05120 415 aa18.56■□□□□ 0.56
ATP2B3-206ENST00000460549 EIF5P55010 431 aaKnown RBP18.56■□□□□ 0.56
ATP2B3-206ENST00000460549 MCM10Q7L590 875 aa18.55■□□□□ 0.56
ATP2B3-206ENST00000460549 FMNL2Q96PY5 1086 aa18.55■□□□□ 0.56
ATP2B3-206ENST00000460549 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
ATP2B3-206ENST00000460549 TBC1D2BQ9UPU7 963 aa18.55■□□□□ 0.56
ATP2B3-206ENST00000460549 CEMIPQ8WUJ3 1361 aa18.55■□□□□ 0.56
ATP2B3-206ENST00000460549 A0A087WZG4 1122 aa18.54■□□□□ 0.56
ATP2B3-206ENST00000460549 A1BGP04217 495 aa18.54■□□□□ 0.56
ATP2B3-206ENST00000460549 DCTN1Q14203 1278 aa18.54■□□□□ 0.56
ATP2B3-206ENST00000460549 C9orf131Q5VYM1 1079 aa18.54■□□□□ 0.56
ATP2B3-206ENST00000460549 RTF1Q92541 710 aaKnown RBP18.54■□□□□ 0.56
ATP2B3-206ENST00000460549 KIF3CO14782 793 aa18.52■□□□□ 0.56
ATP2B3-206ENST00000460549 PIP4K2AP48426 406 aaPredicted RBP18.52■□□□□ 0.56
ATP2B3-206ENST00000460549 TBC1D9BQ66K14 1250 aa18.52■□□□□ 0.56
ATP2B3-206ENST00000460549 PRAMEF22A3QJZ6 481 aa18.51■□□□□ 0.55
ATP2B3-206ENST00000460549 IL6STP40189 918 aaPredicted RBP18.51■□□□□ 0.55
ATP2B3-206ENST00000460549 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
ATP2B3-206ENST00000460549 USP16Q9Y5T5 823 aa18.51■□□□□ 0.55
ATP2B3-206ENST00000460549 C2CD5Q86YS7 1000 aa18.5■□□□□ 0.55
ATP2B3-206ENST00000460549 CCDC24Q8N4L8 307 aa18.5■□□□□ 0.55
ATP2B3-206ENST00000460549 VIRMAQ69YN4 1812 aaKnown RBP18.5■□□□□ 0.55
ATP2B3-206ENST00000460549 UBR2Q8IWV8 1755 aa18.5■□□□□ 0.55
ATP2B3-206ENST00000460549 NMRK2Q9NPI5 230 aa18.49■□□□□ 0.55
ATP2B3-206ENST00000460549 RNF181Q9P0P0 153 aa18.49■□□□□ 0.55
ATP2B3-206ENST00000460549 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
ATP2B3-206ENST00000460549 MIS18AQ9NYP9 233 aa18.48■□□□□ 0.55
ATP2B3-206ENST00000460549 H0YIN7 160 aa18.47■□□□□ 0.55
ATP2B3-206ENST00000460549 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
ATP2B3-206ENST00000460549 CAMTA2O94983 1202 aa18.46■□□□□ 0.55
ATP2B3-206ENST00000460549 SNRPA1P09661 255 aaKnown RBP18.46■□□□□ 0.55
ATP2B3-206ENST00000460549 HSPA6P17066 643 aa18.46■□□□□ 0.55
ATP2B3-206ENST00000460549 RASSF7Q02833 373 aa18.46■□□□□ 0.55
ATP2B3-206ENST00000460549 DZIP3Q86Y13 1208 aaKnown RBP18.46■□□□□ 0.55
ATP2B3-206ENST00000460549 TTLL6Q8N841 843 aa18.46■□□□□ 0.55
ATP2B3-206ENST00000460549 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
ATP2B3-206ENST00000460549 SETDB2Q96T68 719 aa18.45■□□□□ 0.54
ATP2B3-206ENST00000460549 BRCA1P38398 1863 aaKnown RBP18.45■□□□□ 0.54
ATP2B3-206ENST00000460549 NPHP1O15259 732 aa18.44■□□□□ 0.54
ATP2B3-206ENST00000460549 NEFMP07197 916 aa18.44■□□□□ 0.54
ATP2B3-206ENST00000460549 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
ATP2B3-206ENST00000460549 ZNF622Q969S3 477 aaKnown RBP eCLIP18.44■□□□□ 0.54
ATP2B3-206ENST00000460549 SIPA1L3O60292 1781 aaPredicted RBP18.44■□□□□ 0.54
ATP2B3-206ENST00000460549 CEP350Q5VT06 3117 aa18.44■□□□□ 0.54
ATP2B3-206ENST00000460549 TOMM70O94826 608 aa18.43■□□□□ 0.54
ATP2B3-206ENST00000460549 BRIP1Q9BX63 1249 aa18.43■□□□□ 0.54
ATP2B3-206ENST00000460549 ZNF219Q9P2Y4 722 aaPredicted RBP18.43■□□□□ 0.54
ATP2B3-206ENST00000460549 NBPF26B4DH59 902 aa18.42■□□□□ 0.54
ATP2B3-206ENST00000460549 PDE6BP35913 854 aa18.42■□□□□ 0.54
ATP2B3-206ENST00000460549 NBPF10Q6P3W6 841 aaKnown RBP18.42■□□□□ 0.54
ATP2B3-206ENST00000460549 NBPF15Q8N660 670 aa18.42■□□□□ 0.54
ATP2B3-206ENST00000460549 CNBD1Q8NA66 436 aa18.42■□□□□ 0.54
ATP2B3-206ENST00000460549 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
ATP2B3-206ENST00000460549 PRELPP51888 382 aa18.41■□□□□ 0.54
ATP2B3-206ENST00000460549 PLEKHF1Q96S99 279 aa18.41■□□□□ 0.54
ATP2B3-206ENST00000460549 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
ATP2B3-206ENST00000460549 RRAGCQ9HB90 399 aa18.41■□□□□ 0.54
ATP2B3-206ENST00000460549 NRXN2Q9P2S2 1712 aa18.4■□□□□ 0.54
ATP2B3-206ENST00000460549 ARFGEF1Q9Y6D6 1849 aa18.4■□□□□ 0.54
ATP2B3-206ENST00000460549 LMNB1P20700 586 aa18.4■□□□□ 0.54
ATP2B3-206ENST00000460549 KDM2BQ8NHM5 1336 aa18.4■□□□□ 0.54
ATP2B3-206ENST00000460549 C21orf2O43822 256 aa18.39■□□□□ 0.53
ATP2B3-206ENST00000460549 NFE2L2Q16236 605 aa18.39■□□□□ 0.53
ATP2B3-206ENST00000460549 C16orf71Q8IYS4 520 aaPredicted RBP18.39■□□□□ 0.53
ATP2B3-206ENST00000460549 NFKBIEO00221 500 aa18.38■□□□□ 0.53
ATP2B3-206ENST00000460549 ST5P78524 1137 aa18.38■□□□□ 0.53
ATP2B3-206ENST00000460549 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
ATP2B3-206ENST00000460549 NGEFQ8N5V2 710 aa18.38■□□□□ 0.53
ATP2B3-206ENST00000460549 FAM177BA6PVY3 158 aa18.37■□□□□ 0.53
ATP2B3-206ENST00000460549 CLEC4GQ6UXB4 293 aa18.37■□□□□ 0.53
ATP2B3-206ENST00000460549 PDZRN3Q9UPQ7 1066 aa18.37■□□□□ 0.53
ATP2B3-206ENST00000460549 ZNF652Q9Y2D9 606 aa18.37■□□□□ 0.53
ATP2B3-206ENST00000460549 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
ATP2B3-206ENST00000460549 SCN7AQ01118 1682 aa18.36■□□□□ 0.53
ATP2B3-206ENST00000460549 DDX10Q13206 875 aaKnown RBP18.36■□□□□ 0.53
ATP2B3-206ENST00000460549 PNISRQ8TF01 805 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms