RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 SLC4A10Q6U841 1118 aa28.2■■■□□ 2.1
LCNL1-203ENST00000460177 SNRPA1P09661 255 aaKnown RBP28.19■■■□□ 2.1
LCNL1-203ENST00000460177 PROSER3Q2NL68 480 aa28.19■■■□□ 2.1
LCNL1-203ENST00000460177 BARGINQ6ZT62 677 aa28.19■■■□□ 2.1
LCNL1-203ENST00000460177 C1orf115Q9H7X2 142 aa28.19■■■□□ 2.1
LCNL1-203ENST00000460177 FNBP4Q8N3X1 1017 aaPredicted RBP28.18■■■□□ 2.1
LCNL1-203ENST00000460177 CCDC9Q9Y3X0 531 aaKnown RBP28.18■■■□□ 2.1
LCNL1-203ENST00000460177 DDX21Q9NR30 783 aaKnown RBP eCLIP28.17■■■□□ 2.1
LCNL1-203ENST00000460177 TMOD3Q9NYL9 352 aa28.17■■■□□ 2.1
LCNL1-203ENST00000460177 PDIA6Q15084 440 aa28.16■■■□□ 2.1
LCNL1-203ENST00000460177 VPS72Q15906 364 aa28.16■■■□□ 2.1
LCNL1-203ENST00000460177 HYPKQ9NX55 129 aa28.15■■■□□ 2.1
LCNL1-203ENST00000460177 ATP10DQ9P241 1426 aa28.15■■■□□ 2.1
LCNL1-203ENST00000460177 ADCY9O60503 1353 aa28.15■■■□□ 2.1
LCNL1-203ENST00000460177 DDB1Q16531 1140 aa28.15■■■□□ 2.1
LCNL1-203ENST00000460177 MEIS3Q99687 375 aa28.15■■■□□ 2.1
LCNL1-203ENST00000460177 BCL9O00512 1426 aa28.13■■■□□ 2.09
LCNL1-203ENST00000460177 USP16Q9Y5T5 823 aa28.13■■■□□ 2.09
LCNL1-203ENST00000460177 PIGBQ92521 554 aa28.12■■■□□ 2.09
LCNL1-203ENST00000460177 USP21Q9UK80 565 aa28.12■■■□□ 2.09
LCNL1-203ENST00000460177 AFF2P51816 1311 aa28.12■■■□□ 2.09
LCNL1-203ENST00000460177 PI4KAP2A4QPH2 592 aa28.1■■■□□ 2.09
LCNL1-203ENST00000460177 PI4KAP1Q8N8J0 262 aa28.1■■■□□ 2.09
LCNL1-203ENST00000460177 DNAAF4Q8WXU2 420 aa28.1■■■□□ 2.09
LCNL1-203ENST00000460177 THSD7AQ9UPZ6 1657 aa28.1■■■□□ 2.09
LCNL1-203ENST00000460177 SIRT2Q8IXJ6 389 aa28.09■■■□□ 2.09
LCNL1-203ENST00000460177 SMC5Q8IY18 1101 aa28.09■■■□□ 2.09
LCNL1-203ENST00000460177 LRP10Q7Z4F1 713 aa28.08■■■□□ 2.09
LCNL1-203ENST00000460177 PDZRN3Q9UPQ7 1066 aa28.08■■■□□ 2.09
LCNL1-203ENST00000460177 KAT6BQ8WYB5 2073 aa28.07■■■□□ 2.08
LCNL1-203ENST00000460177 ERBB4Q15303 1308 aa28.07■■■□□ 2.08
LCNL1-203ENST00000460177 PTCD1O75127 700 aaKnown RBP28.06■■■□□ 2.08
LCNL1-203ENST00000460177 KSR2Q6VAB6 950 aa28.06■■■□□ 2.08
LCNL1-203ENST00000460177 MARCH10Q8NA82 808 aaPredicted RBP28.06■■■□□ 2.08
LCNL1-203ENST00000460177 ASAP1Q9ULH1 1129 aa28.06■■■□□ 2.08
LCNL1-203ENST00000460177 MYL6BP14649 208 aa28.06■■■□□ 2.08
LCNL1-203ENST00000460177 FAM98CQ17RN3 349 aaKnown RBP28.06■■■□□ 2.08
LCNL1-203ENST00000460177 BEND3Q5T5X7 828 aa28.06■■■□□ 2.08
LCNL1-203ENST00000460177 SRCIN1Q9C0H9 1055 aa28.06■■■□□ 2.08
LCNL1-203ENST00000460177 ATG3Q9NT62 314 aa28.06■■■□□ 2.08
LCNL1-203ENST00000460177 ARFGEF2Q9Y6D5 1785 aa28.05■■■□□ 2.08
LCNL1-203ENST00000460177 ANKRD44Q8N8A2 993 aa28.05■■■□□ 2.08
LCNL1-203ENST00000460177 RGS3P49796 1198 aa28.04■■■□□ 2.08
LCNL1-203ENST00000460177 CEP85Q6P2H3 762 aa28.04■■■□□ 2.08
LCNL1-203ENST00000460177 MAP3K2Q9Y2U5 619 aa28.04■■■□□ 2.08
LCNL1-203ENST00000460177 DDX58O95786 925 aaKnown RBP28.03■■■□□ 2.08
LCNL1-203ENST00000460177 GNAI3P08754 354 aa28.03■■■□□ 2.08
LCNL1-203ENST00000460177 XAGE3Q8WTP9 111 aa28.03■■■□□ 2.08
LCNL1-203ENST00000460177 TJP1Q07157 1748 aa28.03■■■□□ 2.08
LCNL1-203ENST00000460177 PIP4K2AP48426 406 aaPredicted RBP28.02■■■□□ 2.08
LCNL1-203ENST00000460177 AIMP1Q12904 312 aaKnown RBP28.02■■■□□ 2.08
LCNL1-203ENST00000460177 RPAP2Q8IXW5 612 aaPredicted RBP28.02■■■□□ 2.08
LCNL1-203ENST00000460177 NUP188Q5SRE5 1749 aa28.02■■■□□ 2.08
LCNL1-203ENST00000460177 GNAI2P04899 355 aa28.01■■■□□ 2.07
LCNL1-203ENST00000460177 PRIM1P49642 420 aaKnown RBP28.01■■■□□ 2.07
LCNL1-203ENST00000460177 USP44Q9H0E7 712 aa28.01■■■□□ 2.07
LCNL1-203ENST00000460177 VSIG10Q8N0Z9 540 aa28■■■□□ 2.07
LCNL1-203ENST00000460177 SYTL4Q96C24 671 aaPredicted RBP28■■■□□ 2.07
LCNL1-203ENST00000460177 GCC1Q96CN9 775 aa28■■■□□ 2.07
LCNL1-203ENST00000460177 NBPF26B4DH59 902 aa27.99■■■□□ 2.07
LCNL1-203ENST00000460177 NBPF14Q5TI25 921 aa27.99■■■□□ 2.07
LCNL1-203ENST00000460177 NBPF10Q6P3W6 841 aaKnown RBP27.99■■■□□ 2.07
LCNL1-203ENST00000460177 COPS6Q7L5N1 327 aa27.99■■■□□ 2.07
LCNL1-203ENST00000460177 NBPF15Q8N660 670 aa27.99■■■□□ 2.07
LCNL1-203ENST00000460177 ATRNO75882 1429 aa27.99■■■□□ 2.07
LCNL1-203ENST00000460177 AFDNP55196 1824 aaKnown RBP27.97■■■□□ 2.07
LCNL1-203ENST00000460177 ALDH1L1O75891 902 aa27.97■■■□□ 2.07
LCNL1-203ENST00000460177 CICQ96RK0 1608 aaPredicted RBP27.96■■■□□ 2.07
LCNL1-203ENST00000460177 UBTFL1P0CB47 393 aaPredicted RBP27.96■■■□□ 2.07
LCNL1-203ENST00000460177 NUCB1Q02818 461 aa27.96■■■□□ 2.07
LCNL1-203ENST00000460177 RIC3Q7Z5B4 369 aa27.96■■■□□ 2.07
LCNL1-203ENST00000460177 A1BGP04217 495 aa27.95■■■□□ 2.07
LCNL1-203ENST00000460177 ACSBG1Q96GR2 724 aa27.95■■■□□ 2.07
LCNL1-203ENST00000460177 RBM42Q9BTD8 480 aaKnown RBP27.95■■■□□ 2.07
LCNL1-203ENST00000460177 DNAJC10Q8IXB1 793 aa27.95■■■□□ 2.06
LCNL1-203ENST00000460177 LINS1Q8NG48 757 aa27.95■■■□□ 2.06
LCNL1-203ENST00000460177 TEX13AQ9BXU3 409 aaPredicted RBP27.95■■■□□ 2.06
LCNL1-203ENST00000460177 TRPC5Q9UL62 973 aaPredicted RBP27.95■■■□□ 2.06
LCNL1-203ENST00000460177 LRRFIP2Q9Y608 721 aaKnown RBP27.95■■■□□ 2.06
LCNL1-203ENST00000460177 IBTKQ9P2D0 1353 aaPredicted RBP27.94■■■□□ 2.06
LCNL1-203ENST00000460177 GJD4Q96KN9 370 aaPredicted RBP27.94■■■□□ 2.06
LCNL1-203ENST00000460177 SLC4A9Q96Q91 983 aa27.93■■■□□ 2.06
LCNL1-203ENST00000460177 DCTPP1Q9H773 170 aa27.93■■■□□ 2.06
LCNL1-203ENST00000460177 PDE4AP27815 886 aa27.92■■■□□ 2.06
LCNL1-203ENST00000460177 CWF19L2Q2TBE0 894 aaKnown RBP27.92■■■□□ 2.06
LCNL1-203ENST00000460177 ANKRD13DQ6ZTN6 518 aa27.92■■■□□ 2.06
LCNL1-203ENST00000460177 METTL22Q9BUU2 404 aaPredicted RBP27.92■■■□□ 2.06
LCNL1-203ENST00000460177 QTRT2Q9H974 415 aaKnown RBP27.92■■■□□ 2.06
LCNL1-203ENST00000460177 RBM19Q9Y4C8 960 aaKnown RBP27.92■■■□□ 2.06
LCNL1-203ENST00000460177 HMMRO75330 724 aa27.91■■■□□ 2.06
LCNL1-203ENST00000460177 NBPF7P0C2Y1 421 aaPredicted RBP27.91■■■□□ 2.06
LCNL1-203ENST00000460177 CHD1LQ86WJ1 897 aa27.91■■■□□ 2.06
LCNL1-203ENST00000460177 A0A0G2JS52 829 aa27.9■■■□□ 2.06
LCNL1-203ENST00000460177 IGKV5-2P06315 115 aa27.9■■■□□ 2.06
LCNL1-203ENST00000460177 MYT1Q01538 1121 aa27.9■■■□□ 2.06
LCNL1-203ENST00000460177 NHSQ6T4R5 1651 aa27.9■■■□□ 2.06
LCNL1-203ENST00000460177 ILDR1Q86SU0 546 aaPredicted RBP27.89■■■□□ 2.06
LCNL1-203ENST00000460177 PLBD2Q8NHP8 589 aa27.89■■■□□ 2.06
LCNL1-203ENST00000460177 NEXNQ0ZGT2 675 aa27.89■■■□□ 2.05
LCNL1-203ENST00000460177 MYD88Q99836 296 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms