RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 TSKSQ9UJT2 592 aa19.16■□□□□ 0.66
PCOLCE-202ENST00000460002 FLT4P35916 1363 aa19.15■□□□□ 0.66
PCOLCE-202ENST00000460002 THSD7BQ9C0I4 1608 aa19.14■□□□□ 0.66
PCOLCE-202ENST00000460002 CRKLP46109 303 aaKnown RBP19.14■□□□□ 0.65
PCOLCE-202ENST00000460002 C2CD5Q86YS7 1000 aa19.14■□□□□ 0.65
PCOLCE-202ENST00000460002 IFNL2Q8IZJ0 200 aa19.14■□□□□ 0.65
PCOLCE-202ENST00000460002 IQCA1LA6NCM1 817 aa19.13■□□□□ 0.65
PCOLCE-202ENST00000460002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.13■□□□□ 0.65
PCOLCE-202ENST00000460002 DICER1Q9UPY3 1922 aaKnown RBP19.12■□□□□ 0.65
PCOLCE-202ENST00000460002 PRPF38BQ5VTL8 546 aaKnown RBP19.12■□□□□ 0.65
PCOLCE-202ENST00000460002 L3MBTL3Q96JM7 780 aaPredicted RBP19.12■□□□□ 0.65
PCOLCE-202ENST00000460002 BEGAINQ9BUH8 593 aa19.12■□□□□ 0.65
PCOLCE-202ENST00000460002 GGNBP2Q9H3C7 697 aa19.12■□□□□ 0.65
PCOLCE-202ENST00000460002 ABT1Q9ULW3 272 aaKnown RBP19.12■□□□□ 0.65
PCOLCE-202ENST00000460002 ADAMTS7Q9UKP4 1686 aa19.11■□□□□ 0.65
PCOLCE-202ENST00000460002 NFIXQ14938 502 aa19.11■□□□□ 0.65
PCOLCE-202ENST00000460002 EAPPQ56P03 285 aaPredicted RBP19.11■□□□□ 0.65
PCOLCE-202ENST00000460002 USPL1Q5W0Q7 1092 aa19.11■□□□□ 0.65
PCOLCE-202ENST00000460002 ZNF219Q9P2Y4 722 aaPredicted RBP19.11■□□□□ 0.65
PCOLCE-202ENST00000460002 CARMIL3Q8ND23 1372 aa19.1■□□□□ 0.65
PCOLCE-202ENST00000460002 FYB1O15117 783 aa19.1■□□□□ 0.65
PCOLCE-202ENST00000460002 C21orf2O43822 256 aa19.1■□□□□ 0.65
PCOLCE-202ENST00000460002 NRXN2Q9P2S2 1712 aa19.1■□□□□ 0.65
PCOLCE-202ENST00000460002 AFDNP55196 1824 aaKnown RBP19.09■□□□□ 0.65
PCOLCE-202ENST00000460002 KIF24Q5T7B8 1368 aa19.09■□□□□ 0.65
PCOLCE-202ENST00000460002 TONSLQ96HA7 1378 aa19.09■□□□□ 0.65
PCOLCE-202ENST00000460002 LTBP1Q14766 1721 aa19.09■□□□□ 0.65
PCOLCE-202ENST00000460002 H0YIN7 160 aa19.09■□□□□ 0.65
PCOLCE-202ENST00000460002 CAPNS2Q96L46 248 aa19.09■□□□□ 0.65
PCOLCE-202ENST00000460002 ADAMTSL1Q8N6G6 1762 aa19.09■□□□□ 0.65
PCOLCE-202ENST00000460002 LTBP3Q9NS15 1303 aa19.08■□□□□ 0.65
PCOLCE-202ENST00000460002 MAP1SQ66K74 1059 aaPredicted RBP19.08■□□□□ 0.64
PCOLCE-202ENST00000460002 CNTROBQ8N137 903 aa19.08■□□□□ 0.64
PCOLCE-202ENST00000460002 GPR101Q96P66 508 aaPredicted RBP19.08■□□□□ 0.64
PCOLCE-202ENST00000460002 PUS7Q96PZ0 661 aaKnown RBP19.08■□□□□ 0.64
PCOLCE-202ENST00000460002 CLEC11AQ9Y240 323 aa19.08■□□□□ 0.64
PCOLCE-202ENST00000460002 FER1L6Q2WGJ9 1857 aa19.07■□□□□ 0.64
PCOLCE-202ENST00000460002 SCN4AP35499 1836 aa19.07■□□□□ 0.64
PCOLCE-202ENST00000460002 ERVV-2B6SEH9 535 aa19.07■□□□□ 0.64
PCOLCE-202ENST00000460002 PTCD1O75127 700 aaKnown RBP19.07■□□□□ 0.64
PCOLCE-202ENST00000460002 SERPINB2P05120 415 aa19.07■□□□□ 0.64
PCOLCE-202ENST00000460002 INTS5Q6P9B9 1019 aaKnown RBP19.07■□□□□ 0.64
PCOLCE-202ENST00000460002 TAOK3Q9H2K8 898 aa19.07■□□□□ 0.64
PCOLCE-202ENST00000460002 ZPR1O75312 459 aa19.06■□□□□ 0.64
PCOLCE-202ENST00000460002 GRM1Q13255 1194 aa19.06■□□□□ 0.64
PCOLCE-202ENST00000460002 DGKZQ13574 1117 aa19.06■□□□□ 0.64
PCOLCE-202ENST00000460002 CYP4F22Q6NT55 531 aa19.06■□□□□ 0.64
PCOLCE-202ENST00000460002 PAXIP1Q6ZW49 1069 aaPredicted RBP19.05■□□□□ 0.64
PCOLCE-202ENST00000460002 EMILIN1Q9Y6C2 1016 aa19.05■□□□□ 0.64
PCOLCE-202ENST00000460002 ECE1P42892 770 aa19.04■□□□□ 0.64
PCOLCE-202ENST00000460002 SOX10P56693 466 aa19.04■□□□□ 0.64
PCOLCE-202ENST00000460002 ZNF622Q969S3 477 aaKnown RBP eCLIP19.04■□□□□ 0.64
PCOLCE-202ENST00000460002 EYA1Q99502 592 aa19.04■□□□□ 0.64
PCOLCE-202ENST00000460002 EPHX2P34913 555 aa19.03■□□□□ 0.64
PCOLCE-202ENST00000460002 BCL2L12Q9HB09 334 aa19.03■□□□□ 0.64
PCOLCE-202ENST00000460002 DDX21Q9NR30 783 aaKnown RBP eCLIP19.03■□□□□ 0.64
PCOLCE-202ENST00000460002 HACL1Q9UJ83 578 aa19.03■□□□□ 0.64
PCOLCE-202ENST00000460002 TJP1Q07157 1748 aa19.03■□□□□ 0.64
PCOLCE-202ENST00000460002 FMR1Q06787 632 aaKnown RBP eCLIP19.02■□□□□ 0.64
PCOLCE-202ENST00000460002 SOS1Q07889 1333 aaPredicted RBP19.01■□□□□ 0.63
PCOLCE-202ENST00000460002 ZNF541Q9H0D2 1346 aa19.01■□□□□ 0.63
PCOLCE-202ENST00000460002 AOC2O75106 756 aa19.01■□□□□ 0.63
PCOLCE-202ENST00000460002 NARFQ9UHQ1 456 aa19■□□□□ 0.63
PCOLCE-202ENST00000460002 CASP8AP2Q9UKL3 1982 aa18.99■□□□□ 0.63
PCOLCE-202ENST00000460002 CABP4P57796 275 aa18.99■□□□□ 0.63
PCOLCE-202ENST00000460002 PNMA8AQ86V59 439 aaPredicted RBP18.99■□□□□ 0.63
PCOLCE-202ENST00000460002 CARD11Q9BXL7 1154 aa18.99■□□□□ 0.63
PCOLCE-202ENST00000460002 CA12O43570 354 aa18.98■□□□□ 0.63
PCOLCE-202ENST00000460002 MAP2K2P36507 400 aa18.98■□□□□ 0.63
PCOLCE-202ENST00000460002 RNF123Q5XPI4 1314 aa18.98■□□□□ 0.63
PCOLCE-202ENST00000460002 COL11A2P13942 1736 aaPredicted RBP18.97■□□□□ 0.63
PCOLCE-202ENST00000460002 ANKRD31Q8N7Z5 1873 aa18.97■□□□□ 0.63
PCOLCE-202ENST00000460002 PPM1GO15355 546 aaPredicted RBP18.96■□□□□ 0.63
PCOLCE-202ENST00000460002 CST9Q5W186 159 aa18.96■□□□□ 0.63
PCOLCE-202ENST00000460002 COL15A1P39059 1388 aa18.95■□□□□ 0.62
PCOLCE-202ENST00000460002 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
PCOLCE-202ENST00000460002 DNAJC10Q8IXB1 793 aa18.95■□□□□ 0.62
PCOLCE-202ENST00000460002 CCDC24Q8N4L8 307 aa18.95■□□□□ 0.62
PCOLCE-202ENST00000460002 TLL2Q9Y6L7 1015 aa18.95■□□□□ 0.62
PCOLCE-202ENST00000460002 PDE6BP35913 854 aa18.94■□□□□ 0.62
PCOLCE-202ENST00000460002 BICDL1Q6ZP65 573 aa18.94■□□□□ 0.62
PCOLCE-202ENST00000460002 BRIP1Q9BX63 1249 aa18.94■□□□□ 0.62
PCOLCE-202ENST00000460002 PDZRN3Q9UPQ7 1066 aa18.94■□□□□ 0.62
PCOLCE-202ENST00000460002 WASHC2AQ641Q2 1341 aa18.94■□□□□ 0.62
PCOLCE-202ENST00000460002 PRPF40BQ6NWY9 871 aaKnown RBP18.93■□□□□ 0.62
PCOLCE-202ENST00000460002 NFATC2IPQ8NCF5 419 aa18.93■□□□□ 0.62
PCOLCE-202ENST00000460002 SLX4Q8IY92 1834 aa18.93■□□□□ 0.62
PCOLCE-202ENST00000460002 TESK2Q96S53 571 aa18.92■□□□□ 0.62
PCOLCE-202ENST00000460002 TRAF5O00463 557 aa18.91■□□□□ 0.62
PCOLCE-202ENST00000460002 CYP19A1P11511 503 aaPredicted RBP18.91■□□□□ 0.62
PCOLCE-202ENST00000460002 BRPF1P55201 1214 aaPredicted RBP18.91■□□□□ 0.62
PCOLCE-202ENST00000460002 SOGA3Q5TF21 947 aa18.91■□□□□ 0.62
PCOLCE-202ENST00000460002 CNKSR1Q969H4 720 aa18.91■□□□□ 0.62
PCOLCE-202ENST00000460002 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
PCOLCE-202ENST00000460002 ZBTB1Q9Y2K1 713 aa18.91■□□□□ 0.62
PCOLCE-202ENST00000460002 PRR5LQ6MZQ0 368 aa18.9■□□□□ 0.62
PCOLCE-202ENST00000460002 ANKRD26Q9UPS8 1709 aa18.89■□□□□ 0.61
PCOLCE-202ENST00000460002 KIF20BQ96Q89 1820 aa18.89■□□□□ 0.61
PCOLCE-202ENST00000460002 ZNF530Q6P9A1 599 aaPredicted RBP18.89■□□□□ 0.61
PCOLCE-202ENST00000460002 C7orf43Q8WVR3 580 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms