RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 CABP4P57796 275 aa11.37□□□□□ -0.59
CDC42EP3-204ENST00000457889 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
CDC42EP3-204ENST00000457889 MEX3CQ5U5Q3 659 aaKnown RBP11.37□□□□□ -0.59
CDC42EP3-204ENST00000457889 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
CDC42EP3-204ENST00000457889 DZIP1LQ8IYY4 767 aaKnown RBP11.37□□□□□ -0.59
CDC42EP3-204ENST00000457889 BCL2L13Q9BXK5 485 aa11.37□□□□□ -0.59
CDC42EP3-204ENST00000457889 USP35Q9P2H5 1018 aa11.37□□□□□ -0.59
CDC42EP3-204ENST00000457889 TRIM27P14373 513 aa11.36□□□□□ -0.59
CDC42EP3-204ENST00000457889 ZNF790Q6PG37 636 aa11.36□□□□□ -0.59
CDC42EP3-204ENST00000457889 TTC5Q8N0Z6 440 aa11.36□□□□□ -0.59
CDC42EP3-204ENST00000457889 PLSCR2Q9NRY7 297 aa11.36□□□□□ -0.59
CDC42EP3-204ENST00000457889 MIS18AQ9NYP9 233 aa11.36□□□□□ -0.59
CDC42EP3-204ENST00000457889 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
CDC42EP3-204ENST00000457889 ELL2O00472 640 aaPredicted RBP11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 DDB1Q16531 1140 aa11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 HDGFL1Q5TGJ6 251 aa11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 NFATC2IPQ8NCF5 419 aa11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 USP21Q9UK80 565 aa11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 DDX19BQ9UMR2 479 aa11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 TRPC6Q9Y210 931 aa11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 PAPPAQ13219 1627 aa11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 ABCC4O15439 1325 aa11.35□□□□□ -0.59
CDC42EP3-204ENST00000457889 GIGYF1O75420 1035 aaPredicted RBP11.34□□□□□ -0.59
CDC42EP3-204ENST00000457889 MVPQ14764 893 aaKnown RBP11.34□□□□□ -0.59
CDC42EP3-204ENST00000457889 C20orf194Q5TEA3 1177 aa11.34□□□□□ -0.59
CDC42EP3-204ENST00000457889 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
CDC42EP3-204ENST00000457889 DDX54Q8TDD1 881 aaKnown RBP11.34□□□□□ -0.59
CDC42EP3-204ENST00000457889 FMNL2Q96PY5 1086 aa11.34□□□□□ -0.59
CDC42EP3-204ENST00000457889 CCDC9Q9Y3X0 531 aaKnown RBP11.34□□□□□ -0.59
CDC42EP3-204ENST00000457889 ATRNO75882 1429 aa11.34□□□□□ -0.59
CDC42EP3-204ENST00000457889 KRT24Q2M2I5 525 aa11.33□□□□□ -0.6
CDC42EP3-204ENST00000457889 CCDC136Q96JN2 1154 aa11.33□□□□□ -0.6
CDC42EP3-204ENST00000457889 TMOD3Q9NYL9 352 aa11.33□□□□□ -0.6
CDC42EP3-204ENST00000457889 DBF4Q9UBU7 674 aaPredicted RBP11.33□□□□□ -0.6
CDC42EP3-204ENST00000457889 TRPC5Q9UL62 973 aaPredicted RBP11.33□□□□□ -0.6
CDC42EP3-204ENST00000457889 UBR2Q8IWV8 1755 aa11.33□□□□□ -0.6
CDC42EP3-204ENST00000457889 THSD7AQ9UPZ6 1657 aa11.33□□□□□ -0.6
CDC42EP3-204ENST00000457889 ERBB4Q15303 1308 aa11.33□□□□□ -0.6
CDC42EP3-204ENST00000457889 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
CDC42EP3-204ENST00000457889 SNRPA1P09661 255 aaKnown RBP11.32□□□□□ -0.6
CDC42EP3-204ENST00000457889 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
CDC42EP3-204ENST00000457889 BCL9O00512 1426 aa11.32□□□□□ -0.6
CDC42EP3-204ENST00000457889 AFF2P51816 1311 aa11.32□□□□□ -0.6
CDC42EP3-204ENST00000457889 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
CDC42EP3-204ENST00000457889 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
CDC42EP3-204ENST00000457889 PANK1Q8TE04 598 aa11.31□□□□□ -0.6
CDC42EP3-204ENST00000457889 CLUAP1Q96AJ1 413 aa11.31□□□□□ -0.6
CDC42EP3-204ENST00000457889 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
CDC42EP3-204ENST00000457889 LAMB4A4D0S4 1761 aa11.31□□□□□ -0.6
CDC42EP3-204ENST00000457889 RGS12O14924 1447 aa11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 RLBP1P12271 317 aa11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 FLIIQ13045 1269 aa11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 INTS3Q68E01 1043 aaKnown RBP11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 ZNF496Q96IT1 587 aaPredicted RBP11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 GJD4Q96KN9 370 aaPredicted RBP11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 TEX13AQ9BXU3 409 aaPredicted RBP11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 HYPKQ9NX55 129 aa11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 COG6Q9Y2V7 657 aa11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 KCPQ6ZWJ8 1503 aa11.3□□□□□ -0.6
CDC42EP3-204ENST00000457889 IBTKQ9P2D0 1353 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-204ENST00000457889 KCNQ3O43525 872 aa11.29□□□□□ -0.6
CDC42EP3-204ENST00000457889 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-204ENST00000457889 CCT4P50991 539 aaKnown RBP11.29□□□□□ -0.6
CDC42EP3-204ENST00000457889 ITPRIPQ8IWB1 547 aa11.29□□□□□ -0.6
CDC42EP3-204ENST00000457889 DDX21Q9NR30 783 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDC42EP3-204ENST00000457889 GLI3P10071 1580 aa11.28□□□□□ -0.6
CDC42EP3-204ENST00000457889 N4BP2Q86UW6 1770 aaPredicted RBP11.28□□□□□ -0.6
CDC42EP3-204ENST00000457889 SLC39A6Q13433 755 aa11.28□□□□□ -0.6
CDC42EP3-204ENST00000457889 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
CDC42EP3-204ENST00000457889 TMEM57Q8N5G2 664 aa11.28□□□□□ -0.6
CDC42EP3-204ENST00000457889 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
CDC42EP3-204ENST00000457889 ITGB4P16144 1822 aa11.28□□□□□ -0.6
CDC42EP3-204ENST00000457889 DOT1LQ8TEK3 1739 aa11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 MAP3K13O43283 966 aa11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 DDX58O95786 925 aaKnown RBP11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 C7P10643 843 aa11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 EIF2S2P20042 333 aaKnown RBP11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 FKBP5Q13451 457 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 ZNF772Q68DY9 489 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 CENPQQ7L2Z9 268 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 FBXO41Q8TF61 875 aa11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 PIGBQ92521 554 aa11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 CICQ96RK0 1608 aaPredicted RBP11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 C5P01031 1676 aa11.27□□□□□ -0.61
CDC42EP3-204ENST00000457889 TCERG1O14776 1098 aaKnown RBP11.26□□□□□ -0.61
CDC42EP3-204ENST00000457889 B4GALNT3Q6L9W6 998 aa11.26□□□□□ -0.61
CDC42EP3-204ENST00000457889 SMARCC1Q92922 1105 aaPredicted RBP11.26□□□□□ -0.61
CDC42EP3-204ENST00000457889 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
CDC42EP3-204ENST00000457889 ATP10DQ9P241 1426 aa11.26□□□□□ -0.61
CDC42EP3-204ENST00000457889 POTEMA6NI47 508 aa11.25□□□□□ -0.61
CDC42EP3-204ENST00000457889 BMP2KQ9NSY1 1161 aaPredicted RBP11.25□□□□□ -0.61
CDC42EP3-204ENST00000457889 ZNF831Q5JPB2 1677 aa11.24□□□□□ -0.61
CDC42EP3-204ENST00000457889 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
CDC42EP3-204ENST00000457889 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
CDC42EP3-204ENST00000457889 STARD3NLO95772 234 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms