RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 TJP1Q07157 1748 aa29.03■■■□□ 2.24
TMEM56-203ENST00000456991 PER1O15534 1290 aaPredicted RBP29.02■■■□□ 2.24
TMEM56-203ENST00000456991 ZBTB1Q9Y2K1 713 aa29.02■■■□□ 2.24
TMEM56-203ENST00000456991 CC2D1BQ5T0F9 858 aaKnown RBP29.01■■■□□ 2.23
TMEM56-203ENST00000456991 DNAJC5GQ8N7S2 189 aa29.01■■■□□ 2.23
TMEM56-203ENST00000456991 SCN11AQ9UI33 1791 aa29.01■■■□□ 2.23
TMEM56-203ENST00000456991 COL15A1P39059 1388 aa29.01■■■□□ 2.23
TMEM56-203ENST00000456991 MRC1P22897 1456 aa29■■■□□ 2.23
TMEM56-203ENST00000456991 STARD3NLO95772 234 aa28.99■■■□□ 2.23
TMEM56-203ENST00000456991 BRCA1P38398 1863 aaKnown RBP28.98■■■□□ 2.23
TMEM56-203ENST00000456991 SERPINB2P05120 415 aa28.98■■■□□ 2.23
TMEM56-203ENST00000456991 FSTL1Q12841 308 aa28.98■■■□□ 2.23
TMEM56-203ENST00000456991 TTC5Q8N0Z6 440 aa28.98■■■□□ 2.23
TMEM56-203ENST00000456991 BCL2L12Q9HB09 334 aa28.98■■■□□ 2.23
TMEM56-203ENST00000456991 CANXP27824 592 aaKnown RBP28.97■■■□□ 2.23
TMEM56-203ENST00000456991 RRAGCQ9HB90 399 aa28.97■■■□□ 2.23
TMEM56-203ENST00000456991 KCPQ6ZWJ8 1503 aa28.96■■■□□ 2.23
TMEM56-203ENST00000456991 ADAMTS7Q9UKP4 1686 aa28.96■■■□□ 2.23
TMEM56-203ENST00000456991 ARFGEF1Q9Y6D6 1849 aa28.95■■■□□ 2.23
TMEM56-203ENST00000456991 A0A087WZG4 1122 aa28.94■■■□□ 2.22
TMEM56-203ENST00000456991 TTLL6Q8N841 843 aa28.94■■■□□ 2.22
TMEM56-203ENST00000456991 EIF5P55010 431 aaKnown RBP28.93■■■□□ 2.22
TMEM56-203ENST00000456991 C2CD5Q86YS7 1000 aa28.93■■■□□ 2.22
TMEM56-203ENST00000456991 ZC3H4Q9UPT8 1303 aaKnown RBP28.93■■■□□ 2.22
TMEM56-203ENST00000456991 H0YIN7 160 aa28.92■■■□□ 2.22
TMEM56-203ENST00000456991 U2SURPO15042 1029 aaKnown RBP28.92■■■□□ 2.22
TMEM56-203ENST00000456991 TEFQ10587 303 aa28.92■■■□□ 2.22
TMEM56-203ENST00000456991 GAS2L2Q8NHY3 880 aa28.92■■■□□ 2.22
TMEM56-203ENST00000456991 TEX13AQ9BXU3 409 aaPredicted RBP28.92■■■□□ 2.22
TMEM56-203ENST00000456991 LMNB1P20700 586 aa28.91■■■□□ 2.22
TMEM56-203ENST00000456991 RASSF7Q02833 373 aa28.91■■■□□ 2.22
TMEM56-203ENST00000456991 GNAT3A8MTJ3 354 aa28.9■■■□□ 2.22
TMEM56-203ENST00000456991 ZNF790Q6PG37 636 aa28.9■■■□□ 2.22
TMEM56-203ENST00000456991 BICDL1Q6ZP65 573 aa28.9■■■□□ 2.22
TMEM56-203ENST00000456991 IL17REQ8NFR9 667 aa28.9■■■□□ 2.22
TMEM56-203ENST00000456991 ZNF496Q96IT1 587 aaPredicted RBP28.89■■■□□ 2.22
TMEM56-203ENST00000456991 NPC1L1Q9UHC9 1359 aa28.88■■■□□ 2.21
TMEM56-203ENST00000456991 CNGB1Q14028 1251 aaPredicted RBP28.87■■■□□ 2.21
TMEM56-203ENST00000456991 SMC1BQ8NDV3 1235 aa28.86■■■□□ 2.21
TMEM56-203ENST00000456991 PDZRN3Q9UPQ7 1066 aa28.86■■■□□ 2.21
TMEM56-203ENST00000456991 HEG1Q9ULI3 1381 aa28.86■■■□□ 2.21
TMEM56-203ENST00000456991 GLTPD2A6NH11 291 aa28.85■■■□□ 2.21
TMEM56-203ENST00000456991 HTRA3P83110 453 aa28.85■■■□□ 2.21
TMEM56-203ENST00000456991 TBC1D9BQ66K14 1250 aa28.85■■■□□ 2.21
TMEM56-203ENST00000456991 KLRG1Q96E93 195 aa28.85■■■□□ 2.21
TMEM56-203ENST00000456991 VEGFAP15692 232 aaPredicted RBP28.84■■■□□ 2.21
TMEM56-203ENST00000456991 NPM2Q86SE8 214 aaKnown RBP28.84■■■□□ 2.21
TMEM56-203ENST00000456991 BRIP1Q9BX63 1249 aa28.84■■■□□ 2.21
TMEM56-203ENST00000456991 ZNF330Q9Y3S2 320 aaPredicted RBP28.84■■■□□ 2.21
TMEM56-203ENST00000456991 PDE6BP35913 854 aa28.83■■■□□ 2.21
TMEM56-203ENST00000456991 IL6STP40189 918 aaPredicted RBP28.83■■■□□ 2.21
TMEM56-203ENST00000456991 PRELPP51888 382 aa28.83■■■□□ 2.21
TMEM56-203ENST00000456991 FMNL2Q96PY5 1086 aa28.83■■■□□ 2.21
TMEM56-203ENST00000456991 TBC1D2BQ9UPU7 963 aa28.83■■■□□ 2.21
TMEM56-203ENST00000456991 ZNF622Q969S3 477 aaKnown RBP eCLIP28.82■■■□□ 2.2
TMEM56-203ENST00000456991 CARMIL3Q8ND23 1372 aa28.82■■■□□ 2.2
TMEM56-203ENST00000456991 NRXN2Q9P2S2 1712 aa28.81■■■□□ 2.2
TMEM56-203ENST00000456991 COL3A1P02461 1466 aaPredicted RBP28.8■■■□□ 2.2
TMEM56-203ENST00000456991 NFKBIEO00221 500 aa28.8■■■□□ 2.2
TMEM56-203ENST00000456991 JMYQ8N9B5 988 aa28.8■■■□□ 2.2
TMEM56-203ENST00000456991 A1BGP04217 495 aa28.79■■■□□ 2.2
TMEM56-203ENST00000456991 SETDB2Q96T68 719 aa28.79■■■□□ 2.2
TMEM56-203ENST00000456991 BTBD11A6QL63 1104 aa28.78■■■□□ 2.2
TMEM56-203ENST00000456991 PRR5LQ6MZQ0 368 aa28.78■■■□□ 2.2
TMEM56-203ENST00000456991 CFAP53Q96M91 514 aa28.78■■■□□ 2.2
TMEM56-203ENST00000456991 DPY19L2Q6NUT2 758 aa28.77■■■□□ 2.2
TMEM56-203ENST00000456991 PHACTR3Q96KR7 559 aa28.77■■■□□ 2.2
TMEM56-203ENST00000456991 AFDNP55196 1824 aaKnown RBP28.77■■■□□ 2.2
TMEM56-203ENST00000456991 CEMIPQ8WUJ3 1361 aa28.76■■■□□ 2.2
TMEM56-203ENST00000456991 UBR2Q8IWV8 1755 aa28.76■■■□□ 2.19
TMEM56-203ENST00000456991 C21orf2O43822 256 aa28.76■■■□□ 2.19
TMEM56-203ENST00000456991 CCDC24Q8N4L8 307 aa28.76■■■□□ 2.19
TMEM56-203ENST00000456991 SBF1O95248 1867 aa28.75■■■□□ 2.19
TMEM56-203ENST00000456991 NPHP1O15259 732 aa28.75■■■□□ 2.19
TMEM56-203ENST00000456991 PRKAR2BP31323 418 aa28.75■■■□□ 2.19
TMEM56-203ENST00000456991 KCNQ3O43525 872 aa28.74■■■□□ 2.19
TMEM56-203ENST00000456991 CAMTA2O94983 1202 aa28.74■■■□□ 2.19
TMEM56-203ENST00000456991 CNBD1Q8NA66 436 aa28.74■■■□□ 2.19
TMEM56-203ENST00000456991 ZNF219Q9P2Y4 722 aaPredicted RBP28.74■■■□□ 2.19
TMEM56-203ENST00000456991 NUDCQ9Y266 331 aa28.74■■■□□ 2.19
TMEM56-203ENST00000456991 WDR90Q96KV7 1748 aa28.74■■■□□ 2.19
TMEM56-203ENST00000456991 TNRC6CQ9HCJ0 1690 aaKnown RBP28.74■■■□□ 2.19
TMEM56-203ENST00000456991 RSPH6AQ9H0K4 717 aa28.73■■■□□ 2.19
TMEM56-203ENST00000456991 ST5P78524 1137 aa28.72■■■□□ 2.19
TMEM56-203ENST00000456991 ERFEQ4G0M1 354 aa28.72■■■□□ 2.19
TMEM56-203ENST00000456991 DZIP3Q86Y13 1208 aaKnown RBP28.72■■■□□ 2.19
TMEM56-203ENST00000456991 CNKSR1Q969H4 720 aa28.72■■■□□ 2.19
TMEM56-203ENST00000456991 USP16Q9Y5T5 823 aa28.71■■■□□ 2.19
TMEM56-203ENST00000456991 STYK1Q6J9G0 422 aa28.7■■■□□ 2.18
TMEM56-203ENST00000456991 RTF1Q92541 710 aaKnown RBP28.7■■■□□ 2.18
TMEM56-203ENST00000456991 VIRMAQ69YN4 1812 aaKnown RBP28.69■■■□□ 2.18
TMEM56-203ENST00000456991 POTECB2RU33 542 aa28.69■■■□□ 2.18
TMEM56-203ENST00000456991 DLEC1Q9Y238 1755 aa28.69■■■□□ 2.18
TMEM56-203ENST00000456991 SRGNP10124 158 aa28.68■■■□□ 2.18
TMEM56-203ENST00000456991 CLEC4GQ6UXB4 293 aa28.68■■■□□ 2.18
TMEM56-203ENST00000456991 TAOK3Q9H2K8 898 aa28.68■■■□□ 2.18
TMEM56-203ENST00000456991 LTBP3Q9NS15 1303 aa28.68■■■□□ 2.18
TMEM56-203ENST00000456991 SNRPA1P09661 255 aaKnown RBP28.67■■■□□ 2.18
TMEM56-203ENST00000456991 U2AF1L5P0DN76 240 aaPredicted RBP28.67■■■□□ 2.18
TMEM56-203ENST00000456991 U2AF1Q01081 240 aaKnown RBP eCLIP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms