RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 USPL1Q5W0Q7 1092 aa18.13■□□□□ 0.49
SNHG17-208ENST00000456953 TTLL6Q8N841 843 aa18.12■□□□□ 0.49
SNHG17-208ENST00000456953 SOS1Q07889 1333 aaPredicted RBP18.12■□□□□ 0.49
SNHG17-208ENST00000456953 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
SNHG17-208ENST00000456953 NFIXQ14938 502 aa18.11■□□□□ 0.49
SNHG17-208ENST00000456953 AFDNP55196 1824 aaKnown RBP18.11■□□□□ 0.49
SNHG17-208ENST00000456953 NARFQ9UHQ1 456 aa18.1■□□□□ 0.49
SNHG17-208ENST00000456953 POTECB2RU33 542 aa18.09■□□□□ 0.49
SNHG17-208ENST00000456953 NFKBIEO00221 500 aa18.09■□□□□ 0.49
SNHG17-208ENST00000456953 DPY19L2Q6NUT2 758 aa18.09■□□□□ 0.49
SNHG17-208ENST00000456953 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
SNHG17-208ENST00000456953 CCDC88AQ3V6T2 1871 aa18.08■□□□□ 0.49
SNHG17-208ENST00000456953 C2CD5Q86YS7 1000 aa18.08■□□□□ 0.48
SNHG17-208ENST00000456953 AEBP1Q8IUX7 1158 aa18.08■□□□□ 0.48
SNHG17-208ENST00000456953 CREBZFQ9NS37 354 aa18.08■□□□□ 0.48
SNHG17-208ENST00000456953 SCN11AQ9UI33 1791 aa18.07■□□□□ 0.48
SNHG17-208ENST00000456953 COL15A1P39059 1388 aa18.07■□□□□ 0.48
SNHG17-208ENST00000456953 H0YIN7 160 aa18.07■□□□□ 0.48
SNHG17-208ENST00000456953 SERPINB2P05120 415 aa18.07■□□□□ 0.48
SNHG17-208ENST00000456953 CYP19A1P11511 503 aaPredicted RBP18.07■□□□□ 0.48
SNHG17-208ENST00000456953 CHADLQ6NUI6 762 aa18.05■□□□□ 0.48
SNHG17-208ENST00000456953 SLC52A2Q9HAB3 445 aa18.05■□□□□ 0.48
SNHG17-208ENST00000456953 BCL2L12Q9HB09 334 aa18.05■□□□□ 0.48
SNHG17-208ENST00000456953 SULT6B1Q6IMI4 303 aa18.04■□□□□ 0.48
SNHG17-208ENST00000456953 MKRN1Q9UHC7 482 aaKnown RBP18.04■□□□□ 0.48
SNHG17-208ENST00000456953 CARMIL3Q8ND23 1372 aa18.04■□□□□ 0.48
SNHG17-208ENST00000456953 ERFEQ4G0M1 354 aa18.03■□□□□ 0.48
SNHG17-208ENST00000456953 AKAP4Q5JQC9 854 aa18.03■□□□□ 0.48
SNHG17-208ENST00000456953 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
SNHG17-208ENST00000456953 ZBTB1Q9Y2K1 713 aa18.03■□□□□ 0.48
SNHG17-208ENST00000456953 MRC1P22897 1456 aa18.02■□□□□ 0.48
SNHG17-208ENST00000456953 DICER1Q9UPY3 1922 aaKnown RBP18.02■□□□□ 0.48
SNHG17-208ENST00000456953 PRDM10Q9NQV6 1147 aa18.02■□□□□ 0.48
SNHG17-208ENST00000456953 FOXN1O15353 648 aa18.01■□□□□ 0.47
SNHG17-208ENST00000456953 VSIG10Q8N0Z9 540 aa18.01■□□□□ 0.47
SNHG17-208ENST00000456953 POLR3GLQ9BT43 218 aa18.01■□□□□ 0.47
SNHG17-208ENST00000456953 CNTNAP1P78357 1384 aa18.01■□□□□ 0.47
SNHG17-208ENST00000456953 LTBP3Q9NS15 1303 aa18■□□□□ 0.47
SNHG17-208ENST00000456953 SLC39A6Q13433 755 aa18■□□□□ 0.47
SNHG17-208ENST00000456953 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.47
SNHG17-208ENST00000456953 BRIP1Q9BX63 1249 aa18■□□□□ 0.47
SNHG17-208ENST00000456953 LGR6Q9HBX8 967 aa18■□□□□ 0.47
SNHG17-208ENST00000456953 FER1L6Q2WGJ9 1857 aa18■□□□□ 0.47
SNHG17-208ENST00000456953 C21orf2O43822 256 aa17.99■□□□□ 0.47
SNHG17-208ENST00000456953 PDE6BP35913 854 aa17.99■□□□□ 0.47
SNHG17-208ENST00000456953 BICDL1Q6ZP65 573 aa17.98■□□□□ 0.47
SNHG17-208ENST00000456953 AIDAQ96BJ3 306 aa17.98■□□□□ 0.47
SNHG17-208ENST00000456953 TAOK3Q9H2K8 898 aa17.98■□□□□ 0.47
SNHG17-208ENST00000456953 ANKRD31Q8N7Z5 1873 aa17.98■□□□□ 0.47
SNHG17-208ENST00000456953 A0A087WZG4 1122 aa17.97■□□□□ 0.47
SNHG17-208ENST00000456953 RNMTO43148 476 aaKnown RBP17.97■□□□□ 0.47
SNHG17-208ENST00000456953 DDNO94850 711 aaPredicted RBP17.97■□□□□ 0.47
SNHG17-208ENST00000456953 POTEIP0CG38 1075 aa17.97■□□□□ 0.47
SNHG17-208ENST00000456953 POTEJP0CG39 1038 aa17.97■□□□□ 0.47
SNHG17-208ENST00000456953 CANXP27824 592 aaKnown RBP17.97■□□□□ 0.47
SNHG17-208ENST00000456953 IL13P35225 146 aa17.97■□□□□ 0.47
SNHG17-208ENST00000456953 CTCFP49711 727 aaPredicted RBP17.97■□□□□ 0.47
SNHG17-208ENST00000456953 EIF5P55010 431 aaKnown RBP17.97■□□□□ 0.47
SNHG17-208ENST00000456953 MORC1Q86VD1 984 aa17.97■□□□□ 0.47
SNHG17-208ENST00000456953 ZNF219Q9P2Y4 722 aaPredicted RBP17.97■□□□□ 0.47
SNHG17-208ENST00000456953 COL11A2P13942 1736 aaPredicted RBP17.96■□□□□ 0.47
SNHG17-208ENST00000456953 IQCA1LA6NCM1 817 aa17.96■□□□□ 0.47
SNHG17-208ENST00000456953 STARD3NLO95772 234 aa17.96■□□□□ 0.47
SNHG17-208ENST00000456953 LDHDQ86WU2 507 aa17.96■□□□□ 0.47
SNHG17-208ENST00000456953 PANK3Q9H999 370 aa17.96■□□□□ 0.47
SNHG17-208ENST00000456953 PASKQ96RG2 1323 aa17.96■□□□□ 0.46
SNHG17-208ENST00000456953 SLC34A2O95436 690 aa17.95■□□□□ 0.46
SNHG17-208ENST00000456953 TBC1D9BQ66K14 1250 aa17.95■□□□□ 0.46
SNHG17-208ENST00000456953 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
SNHG17-208ENST00000456953 SOGA3Q5TF21 947 aa17.94■□□□□ 0.46
SNHG17-208ENST00000456953 PRR5LQ6MZQ0 368 aa17.94■□□□□ 0.46
SNHG17-208ENST00000456953 CNKSR1Q969H4 720 aa17.94■□□□□ 0.46
SNHG17-208ENST00000456953 L3MBTL3Q96JM7 780 aaPredicted RBP17.94■□□□□ 0.46
SNHG17-208ENST00000456953 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
SNHG17-208ENST00000456953 TMEM88BA6NKF7 163 aa17.93■□□□□ 0.46
SNHG17-208ENST00000456953 VEGFBP49765 207 aa17.93■□□□□ 0.46
SNHG17-208ENST00000456953 SCN4AP35499 1836 aa17.93■□□□□ 0.46
SNHG17-208ENST00000456953 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
SNHG17-208ENST00000456953 STYK1Q6J9G0 422 aa17.92■□□□□ 0.46
SNHG17-208ENST00000456953 PRPF40BQ6NWY9 871 aaKnown RBP17.92■□□□□ 0.46
SNHG17-208ENST00000456953 CCER1Q8TC90 406 aaPredicted RBP17.92■□□□□ 0.46
SNHG17-208ENST00000456953 TAF1DQ9H5J8 278 aaPredicted RBP17.92■□□□□ 0.46
SNHG17-208ENST00000456953 WBP1LQ9NX94 342 aa17.92■□□□□ 0.46
SNHG17-208ENST00000456953 TTC5Q8N0Z6 440 aa17.91■□□□□ 0.46
SNHG17-208ENST00000456953 CCDC24Q8N4L8 307 aa17.91■□□□□ 0.46
SNHG17-208ENST00000456953 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
SNHG17-208ENST00000456953 SLX4Q8IY92 1834 aa17.91■□□□□ 0.46
SNHG17-208ENST00000456953 SRGNP10124 158 aa17.9■□□□□ 0.46
SNHG17-208ENST00000456953 SETDB2Q96T68 719 aa17.9■□□□□ 0.46
SNHG17-208ENST00000456953 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
SNHG17-208ENST00000456953 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
SNHG17-208ENST00000456953 ITGBL1O95965 494 aaPredicted RBP17.89■□□□□ 0.45
SNHG17-208ENST00000456953 LBX1P52954 281 aa17.89■□□□□ 0.45
SNHG17-208ENST00000456953 MTHFSDQ2M296 383 aaKnown RBP17.89■□□□□ 0.45
SNHG17-208ENST00000456953 MASTLQ96GX5 879 aa17.89■□□□□ 0.45
SNHG17-208ENST00000456953 TEX13AQ9BXU3 409 aaPredicted RBP17.89■□□□□ 0.45
SNHG17-208ENST00000456953 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.45
SNHG17-208ENST00000456953 NPHP1O15259 732 aa17.88■□□□□ 0.45
SNHG17-208ENST00000456953 HMOX1P09601 288 aa17.88■□□□□ 0.45
SNHG17-208ENST00000456953 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms