RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 CC2D1BQ5T0F9 858 aaKnown RBP17.98■□□□□ 0.47
PSMC4-202ENST00000455878 VSIG10Q8N0Z9 540 aa17.98■□□□□ 0.47
PSMC4-202ENST00000455878 RBM46Q8TBY0 533 aaKnown RBP17.98■□□□□ 0.47
PSMC4-202ENST00000455878 SOS1Q07889 1333 aaPredicted RBP17.98■□□□□ 0.47
PSMC4-202ENST00000455878 NFIXQ14938 502 aa17.98■□□□□ 0.47
PSMC4-202ENST00000455878 SERPINB2P05120 415 aa17.97■□□□□ 0.47
PSMC4-202ENST00000455878 CANXP27824 592 aaKnown RBP17.97■□□□□ 0.47
PSMC4-202ENST00000455878 RRAGCQ9HB90 399 aa17.97■□□□□ 0.47
PSMC4-202ENST00000455878 A0A087WZG4 1122 aa17.96■□□□□ 0.46
PSMC4-202ENST00000455878 CNGB1Q14028 1251 aaPredicted RBP17.96■□□□□ 0.46
PSMC4-202ENST00000455878 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.46
PSMC4-202ENST00000455878 ZBTB1Q9Y2K1 713 aa17.96■□□□□ 0.46
PSMC4-202ENST00000455878 KIAA1551Q9HCM1 1747 aa17.95■□□□□ 0.46
PSMC4-202ENST00000455878 H0YIN7 160 aa17.95■□□□□ 0.46
PSMC4-202ENST00000455878 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
PSMC4-202ENST00000455878 TEFQ10587 303 aa17.95■□□□□ 0.46
PSMC4-202ENST00000455878 FSTL1Q12841 308 aa17.95■□□□□ 0.46
PSMC4-202ENST00000455878 DNAJC5GQ8N7S2 189 aa17.95■□□□□ 0.46
PSMC4-202ENST00000455878 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
PSMC4-202ENST00000455878 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
PSMC4-202ENST00000455878 PER1O15534 1290 aaPredicted RBP17.94■□□□□ 0.46
PSMC4-202ENST00000455878 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
PSMC4-202ENST00000455878 TTLL6Q8N841 843 aa17.94■□□□□ 0.46
PSMC4-202ENST00000455878 COL15A1P39059 1388 aa17.93■□□□□ 0.46
PSMC4-202ENST00000455878 GNAT3A8MTJ3 354 aa17.93■□□□□ 0.46
PSMC4-202ENST00000455878 C2CD5Q86YS7 1000 aa17.93■□□□□ 0.46
PSMC4-202ENST00000455878 GAS2L2Q8NHY3 880 aa17.93■□□□□ 0.46
PSMC4-202ENST00000455878 LMNB1P20700 586 aa17.92■□□□□ 0.46
PSMC4-202ENST00000455878 ZNF330Q9Y3S2 320 aaPredicted RBP17.91■□□□□ 0.46
PSMC4-202ENST00000455878 ARFGEF1Q9Y6D6 1849 aa17.9■□□□□ 0.46
PSMC4-202ENST00000455878 TJP1Q07157 1748 aa17.9■□□□□ 0.46
PSMC4-202ENST00000455878 EIF5P55010 431 aaKnown RBP17.9■□□□□ 0.46
PSMC4-202ENST00000455878 BCL2L12Q9HB09 334 aa17.9■□□□□ 0.46
PSMC4-202ENST00000455878 PDZRN3Q9UPQ7 1066 aa17.9■□□□□ 0.46
PSMC4-202ENST00000455878 BRCA1P38398 1863 aaKnown RBP17.9■□□□□ 0.46
PSMC4-202ENST00000455878 ZC3H4Q9UPT8 1303 aaKnown RBP17.89■□□□□ 0.45
PSMC4-202ENST00000455878 NPHP1O15259 732 aa17.89■□□□□ 0.45
PSMC4-202ENST00000455878 PDE6BP35913 854 aa17.89■□□□□ 0.45
PSMC4-202ENST00000455878 ZNF790Q6PG37 636 aa17.89■□□□□ 0.45
PSMC4-202ENST00000455878 SMC1BQ8NDV3 1235 aa17.89■□□□□ 0.45
PSMC4-202ENST00000455878 IL17REQ8NFR9 667 aa17.89■□□□□ 0.45
PSMC4-202ENST00000455878 ZNF622Q969S3 477 aaKnown RBP eCLIP17.89■□□□□ 0.455e-7■■■□□ 15.8
PSMC4-202ENST00000455878 ZNF496Q96IT1 587 aaPredicted RBP17.89■□□□□ 0.45
PSMC4-202ENST00000455878 KCPQ6ZWJ8 1503 aa17.88■□□□□ 0.45
PSMC4-202ENST00000455878 VEGFAP15692 232 aaPredicted RBP17.88■□□□□ 0.45
PSMC4-202ENST00000455878 RASSF7Q02833 373 aa17.88■□□□□ 0.45
PSMC4-202ENST00000455878 TBC1D2BQ9UPU7 963 aa17.88■□□□□ 0.45
PSMC4-202ENST00000455878 GLTPD2A6NH11 291 aa17.87■□□□□ 0.45
PSMC4-202ENST00000455878 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
PSMC4-202ENST00000455878 KLRG1Q96E93 195 aa17.87■□□□□ 0.45
PSMC4-202ENST00000455878 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
PSMC4-202ENST00000455878 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
PSMC4-202ENST00000455878 IL6STP40189 918 aaPredicted RBP17.86■□□□□ 0.45
PSMC4-202ENST00000455878 HTRA3P83110 453 aa17.86■□□□□ 0.45
PSMC4-202ENST00000455878 TBC1D9BQ66K14 1250 aa17.86■□□□□ 0.45
PSMC4-202ENST00000455878 CFAP53Q96M91 514 aa17.86■□□□□ 0.45
PSMC4-202ENST00000455878 SETDB2Q96T68 719 aa17.86■□□□□ 0.45
PSMC4-202ENST00000455878 MRC1P22897 1456 aa17.86■□□□□ 0.45
PSMC4-202ENST00000455878 BTBD11A6QL63 1104 aa17.85■□□□□ 0.45
PSMC4-202ENST00000455878 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
PSMC4-202ENST00000455878 HEG1Q9ULI3 1381 aa17.85■□□□□ 0.45
PSMC4-202ENST00000455878 ZNF219Q9P2Y4 722 aaPredicted RBP17.84■□□□□ 0.45
PSMC4-202ENST00000455878 C21orf2O43822 256 aa17.83■□□□□ 0.44
PSMC4-202ENST00000455878 A1BGP04217 495 aa17.82■□□□□ 0.44
PSMC4-202ENST00000455878 CCDC24Q8N4L8 307 aa17.82■□□□□ 0.44
PSMC4-202ENST00000455878 RTF1Q92541 710 aaKnown RBP17.82■□□□□ 0.44
PSMC4-202ENST00000455878 ADAMTS7Q9UKP4 1686 aa17.82■□□□□ 0.44
PSMC4-202ENST00000455878 NPC1L1Q9UHC9 1359 aa17.82■□□□□ 0.44
PSMC4-202ENST00000455878 SBF1O95248 1867 aa17.82■□□□□ 0.44
PSMC4-202ENST00000455878 PRKAR2BP31323 418 aa17.81■□□□□ 0.44
PSMC4-202ENST00000455878 ST5P78524 1137 aa17.81■□□□□ 0.44
PSMC4-202ENST00000455878 PRR5LQ6MZQ0 368 aa17.81■□□□□ 0.44
PSMC4-202ENST00000455878 CNBD1Q8NA66 436 aa17.81■□□□□ 0.44
PSMC4-202ENST00000455878 CNKSR1Q969H4 720 aa17.81■□□□□ 0.44
PSMC4-202ENST00000455878 PHACTR3Q96KR7 559 aa17.81■□□□□ 0.44
PSMC4-202ENST00000455878 AFDNP55196 1824 aaKnown RBP17.81■□□□□ 0.44
PSMC4-202ENST00000455878 NFKBIEO00221 500 aa17.8■□□□□ 0.44
PSMC4-202ENST00000455878 ERFEQ4G0M1 354 aa17.8■□□□□ 0.44
PSMC4-202ENST00000455878 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
PSMC4-202ENST00000455878 JMYQ8N9B5 988 aa17.8■□□□□ 0.44
PSMC4-202ENST00000455878 CARMIL3Q8ND23 1372 aa17.8■□□□□ 0.44
PSMC4-202ENST00000455878 PCNTO95613 3336 aa17.79■□□□□ 0.44
PSMC4-202ENST00000455878 PRELPP51888 382 aa17.79■□□□□ 0.44
PSMC4-202ENST00000455878 DIEXFQ68CQ4 756 aaKnown RBP17.79■□□□□ 0.44
PSMC4-202ENST00000455878 KCNQ3O43525 872 aa17.78■□□□□ 0.44
PSMC4-202ENST00000455878 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
PSMC4-202ENST00000455878 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
PSMC4-202ENST00000455878 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
PSMC4-202ENST00000455878 VIRMAQ69YN4 1812 aaKnown RBP17.78■□□□□ 0.44
PSMC4-202ENST00000455878 CAMTA2O94983 1202 aa17.77■□□□□ 0.44
PSMC4-202ENST00000455878 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
PSMC4-202ENST00000455878 STYK1Q6J9G0 422 aa17.77■□□□□ 0.44
PSMC4-202ENST00000455878 NBPF5PQ86XG9 351 aaPredicted RBP17.77■□□□□ 0.44
PSMC4-202ENST00000455878 MASTLQ96GX5 879 aa17.77■□□□□ 0.44
PSMC4-202ENST00000455878 TAOK3Q9H2K8 898 aa17.77■□□□□ 0.44
PSMC4-202ENST00000455878 ZNF652Q9Y2D9 606 aa17.77■□□□□ 0.44
PSMC4-202ENST00000455878 USP16Q9Y5T5 823 aa17.77■□□□□ 0.44
PSMC4-202ENST00000455878 NRXN2Q9P2S2 1712 aa17.77■□□□□ 0.43
PSMC4-202ENST00000455878 CLEC4GQ6UXB4 293 aa17.76■□□□□ 0.43
PSMC4-202ENST00000455878 RSPH6AQ9H0K4 717 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms