RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 KCNQ3O43525 872 aa15.97■□□□□ 0.15
PDGFB-204ENST00000455790 DPEP1P16444 411 aa15.97■□□□□ 0.15
PDGFB-204ENST00000455790 ADCY9O60503 1353 aa15.97■□□□□ 0.15
PDGFB-204ENST00000455790 ATP10DQ9P241 1426 aa15.96■□□□□ 0.15
PDGFB-204ENST00000455790 POLRMTO00411 1230 aaKnown RBP15.96■□□□□ 0.15
PDGFB-204ENST00000455790 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
PDGFB-204ENST00000455790 MCM10Q7L590 875 aa15.96■□□□□ 0.15
PDGFB-204ENST00000455790 BCL2L12Q9HB09 334 aa15.96■□□□□ 0.15
PDGFB-204ENST00000455790 ZPR1O75312 459 aa15.95■□□□□ 0.14
PDGFB-204ENST00000455790 FCHSD2O94868 740 aa15.95■□□□□ 0.14
PDGFB-204ENST00000455790 TGFB2P61812 414 aa15.95■□□□□ 0.14
PDGFB-204ENST00000455790 DCTN1Q14203 1278 aa15.95■□□□□ 0.14
PDGFB-204ENST00000455790 KCNA3P22001 575 aa15.94■□□□□ 0.14
PDGFB-204ENST00000455790 TM4SF1P30408 202 aa15.94■□□□□ 0.14
PDGFB-204ENST00000455790 NARFQ9UHQ1 456 aa15.94■□□□□ 0.14
PDGFB-204ENST00000455790 BRCA1P38398 1863 aaKnown RBP15.94■□□□□ 0.14
PDGFB-204ENST00000455790 BTBD11A6QL63 1104 aa15.93■□□□□ 0.14
PDGFB-204ENST00000455790 NFIXQ14938 502 aa15.93■□□□□ 0.14
PDGFB-204ENST00000455790 BCS1LQ9Y276 419 aa15.93■□□□□ 0.14
PDGFB-204ENST00000455790 SCN7AQ01118 1682 aa15.92■□□□□ 0.14
PDGFB-204ENST00000455790 STARD3NLO95772 234 aa15.92■□□□□ 0.14
PDGFB-204ENST00000455790 EIF5P55010 431 aaKnown RBP15.92■□□□□ 0.14
PDGFB-204ENST00000455790 FMNL2Q96PY5 1086 aa15.92■□□□□ 0.14
PDGFB-204ENST00000455790 NRXN2Q9P2S2 1712 aa15.91■□□□□ 0.14
PDGFB-204ENST00000455790 PRAMEF22A3QJZ6 481 aa15.91■□□□□ 0.14
PDGFB-204ENST00000455790 CHRNA5P30532 468 aa15.91■□□□□ 0.14
PDGFB-204ENST00000455790 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
PDGFB-204ENST00000455790 CARMIL3Q8ND23 1372 aa15.9■□□□□ 0.14
PDGFB-204ENST00000455790 AFDNP55196 1824 aaKnown RBP15.9■□□□□ 0.14
PDGFB-204ENST00000455790 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
PDGFB-204ENST00000455790 A1BGP04217 495 aa15.9■□□□□ 0.14
PDGFB-204ENST00000455790 C1QTNF8P60827 252 aa15.9■□□□□ 0.14
PDGFB-204ENST00000455790 RTF1Q92541 710 aaKnown RBP15.9■□□□□ 0.14
PDGFB-204ENST00000455790 PIP4K2AP48426 406 aaPredicted RBP15.89■□□□□ 0.13
PDGFB-204ENST00000455790 ZNF526Q8TF50 670 aaPredicted RBP15.89■□□□□ 0.13
PDGFB-204ENST00000455790 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
PDGFB-204ENST00000455790 BICDL1Q6ZP65 573 aa15.88■□□□□ 0.13
PDGFB-204ENST00000455790 TEX13AQ9BXU3 409 aaPredicted RBP15.88■□□□□ 0.13
PDGFB-204ENST00000455790 TBC1D2BQ9UPU7 963 aa15.88■□□□□ 0.13
PDGFB-204ENST00000455790 USP16Q9Y5T5 823 aa15.88■□□□□ 0.13
PDGFB-204ENST00000455790 SERPINB2P05120 415 aa15.87■□□□□ 0.13
PDGFB-204ENST00000455790 IL6STP40189 918 aaPredicted RBP15.87■□□□□ 0.13
PDGFB-204ENST00000455790 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
PDGFB-204ENST00000455790 TBC1D9BQ66K14 1250 aa15.87■□□□□ 0.13
PDGFB-204ENST00000455790 MIS18AQ9NYP9 233 aa15.87■□□□□ 0.13
PDGFB-204ENST00000455790 DLG5Q8TDM6 1919 aa15.87■□□□□ 0.13
PDGFB-204ENST00000455790 ARFGEF1Q9Y6D6 1849 aa15.87■□□□□ 0.13
PDGFB-204ENST00000455790 BCORQ6W2J9 1755 aa15.86■□□□□ 0.13
PDGFB-204ENST00000455790 A0A087WZG4 1122 aa15.86■□□□□ 0.13
PDGFB-204ENST00000455790 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
PDGFB-204ENST00000455790 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
PDGFB-204ENST00000455790 THUMPD2Q9BTF0 503 aaKnown RBP15.86■□□□□ 0.13
PDGFB-204ENST00000455790 PIM2Q9P1W9 311 aa15.86■□□□□ 0.13
PDGFB-204ENST00000455790 CAMTA2O94983 1202 aa15.85■□□□□ 0.13
PDGFB-204ENST00000455790 NFE2L2Q16236 605 aa15.85■□□□□ 0.13
PDGFB-204ENST00000455790 DALRD3Q5D0E6 543 aaKnown RBP15.85■□□□□ 0.13
PDGFB-204ENST00000455790 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
PDGFB-204ENST00000455790 SNRPA1P09661 255 aaKnown RBP15.84■□□□□ 0.13
PDGFB-204ENST00000455790 RALBP1Q15311 655 aa15.84■□□□□ 0.13
PDGFB-204ENST00000455790 CCDC24Q8N4L8 307 aa15.84■□□□□ 0.13
PDGFB-204ENST00000455790 KDM3BQ7LBC6 1761 aa15.84■□□□□ 0.13
PDGFB-204ENST00000455790 DLEC1Q9Y238 1755 aa15.84■□□□□ 0.13
PDGFB-204ENST00000455790 CEP350Q5VT06 3117 aa15.83■□□□□ 0.13
PDGFB-204ENST00000455790 ANKRD31Q8N7Z5 1873 aa15.83■□□□□ 0.12
PDGFB-204ENST00000455790 SENP3-EIF4A1A0A087X0R7 540 aa15.83■□□□□ 0.12
PDGFB-204ENST00000455790 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
PDGFB-204ENST00000455790 TAF7Q15545 349 aaPredicted RBP15.83■□□□□ 0.12
PDGFB-204ENST00000455790 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
PDGFB-204ENST00000455790 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
PDGFB-204ENST00000455790 COL11A2P13942 1736 aaPredicted RBP15.82■□□□□ 0.12
PDGFB-204ENST00000455790 LAMB4A4D0S4 1761 aa15.82■□□□□ 0.12
PDGFB-204ENST00000455790 NEFMP07197 916 aa15.82■□□□□ 0.12
PDGFB-204ENST00000455790 DZIP3Q86Y13 1208 aaKnown RBP15.82■□□□□ 0.12
PDGFB-204ENST00000455790 PRR5LQ6MZQ0 368 aa15.81■□□□□ 0.12
PDGFB-204ENST00000455790 C2CD5Q86YS7 1000 aa15.81■□□□□ 0.12
PDGFB-204ENST00000455790 MAPK8IP3Q9UPT6 1336 aa15.81■□□□□ 0.12
PDGFB-204ENST00000455790 MYBBP1AQ9BQG0 1328 aaKnown RBP15.8■□□□□ 0.12
PDGFB-204ENST00000455790 RASSF7Q02833 373 aa15.8■□□□□ 0.12
PDGFB-204ENST00000455790 C9orf131Q5VYM1 1079 aa15.8■□□□□ 0.12
PDGFB-204ENST00000455790 KIF3CO14782 793 aa15.79■□□□□ 0.12
PDGFB-204ENST00000455790 NPM2Q86SE8 214 aaKnown RBP15.79■□□□□ 0.12
PDGFB-204ENST00000455790 EIF4A1P60842 406 aaKnown RBP15.78■□□□□ 0.12
PDGFB-204ENST00000455790 SETDB2Q96T68 719 aa15.78■□□□□ 0.12
PDGFB-204ENST00000455790 H0YIN7 160 aa15.77■□□□□ 0.12
PDGFB-204ENST00000455790 PRELPP51888 382 aa15.77■□□□□ 0.12
PDGFB-204ENST00000455790 CCDC146Q8IYE0 955 aa15.77■□□□□ 0.12
PDGFB-204ENST00000455790 TTLL6Q8N841 843 aa15.77■□□□□ 0.12
PDGFB-204ENST00000455790 CNBD1Q8NA66 436 aa15.77■□□□□ 0.12
PDGFB-204ENST00000455790 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.12
PDGFB-204ENST00000455790 RNF181Q9P0P0 153 aa15.77■□□□□ 0.12
PDGFB-204ENST00000455790 BRIP1Q9BX63 1249 aa15.76■□□□□ 0.11
PDGFB-204ENST00000455790 PNNQ9H307 717 aaKnown RBP15.76■□□□□ 0.11
PDGFB-204ENST00000455790 NMRK2Q9NPI5 230 aa15.76■□□□□ 0.11
PDGFB-204ENST00000455790 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
PDGFB-204ENST00000455790 TMPOP42166 694 aaKnown RBP15.75■□□□□ 0.11
PDGFB-204ENST00000455790 RIPK4P57078 832 aa15.75■□□□□ 0.11
PDGFB-204ENST00000455790 HLFQ16534 295 aa15.75■□□□□ 0.11
PDGFB-204ENST00000455790 SBF1O95248 1867 aa15.74■□□□□ 0.11
PDGFB-204ENST00000455790 NFKBIEO00221 500 aa15.74■□□□□ 0.11
PDGFB-204ENST00000455790 PDE6BP35913 854 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms