RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 UPF2Q9HAU5 1272 aaKnown RBP11.61□□□□□ -0.55
VSIG4-204ENST00000455586 PARP4Q9UKK3 1724 aaKnown RBP11.61□□□□□ -0.55
VSIG4-204ENST00000455586 A0A0G2JS52 829 aa11.61□□□□□ -0.55
VSIG4-204ENST00000455586 PDIA6Q15084 440 aa11.61□□□□□ -0.55
VSIG4-204ENST00000455586 KAT6BQ8WYB5 2073 aa11.61□□□□□ -0.55
VSIG4-204ENST00000455586 ANKRD45Q5TZF3 282 aa11.6□□□□□ -0.55
VSIG4-204ENST00000455586 CEP85Q6P2H3 762 aa11.6□□□□□ -0.55
VSIG4-204ENST00000455586 SYTL4Q96C24 671 aaPredicted RBP11.6□□□□□ -0.55
VSIG4-204ENST00000455586 DBF4Q9UBU7 674 aaPredicted RBP11.6□□□□□ -0.55
VSIG4-204ENST00000455586 SHANK3Q9BYB0 1731 aa11.6□□□□□ -0.55
VSIG4-204ENST00000455586 NKX1-1Q15270 411 aaPredicted RBP11.6□□□□□ -0.55
VSIG4-204ENST00000455586 NGLY1Q96IV0 654 aa11.6□□□□□ -0.55
VSIG4-204ENST00000455586 DCTPP1Q9H773 170 aa11.6□□□□□ -0.55
VSIG4-204ENST00000455586 SPATA31A1Q5TZJ5 1347 aa11.59□□□□□ -0.55
VSIG4-204ENST00000455586 APBB1O00213 710 aa11.59□□□□□ -0.55
VSIG4-204ENST00000455586 EXOC5O00471 708 aa11.59□□□□□ -0.55
VSIG4-204ENST00000455586 HSPA1LP34931 641 aa11.59□□□□□ -0.55
VSIG4-204ENST00000455586 PIGBQ92521 554 aa11.59□□□□□ -0.55
VSIG4-204ENST00000455586 FMNL2Q96PY5 1086 aa11.59□□□□□ -0.55
VSIG4-204ENST00000455586 ASAP1Q9ULH1 1129 aa11.59□□□□□ -0.55
VSIG4-204ENST00000455586 ADCY9O60503 1353 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 ERVV-2B6SEH9 535 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 HMMRO75330 724 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 SEC24BO95487 1268 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 MAP3K2Q9Y2U5 619 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 DISP2A7MBM2 1401 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 C5P01031 1676 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 PLCH1Q4KWH8 1693 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 MRC1P22897 1456 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 GNAI3P08754 354 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 SNRPA1P09661 255 aaKnown RBP11.58□□□□□ -0.56
VSIG4-204ENST00000455586 BMP2KLQ5H9B9 411 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 ACSBG1Q96GR2 724 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 TMOD3Q9NYL9 352 aa11.58□□□□□ -0.56
VSIG4-204ENST00000455586 CWF19L2Q2TBE0 894 aaKnown RBP11.57□□□□□ -0.56
VSIG4-204ENST00000455586 DNAAF4Q8WXU2 420 aa11.57□□□□□ -0.56
VSIG4-204ENST00000455586 USP44Q9H0E7 712 aa11.57□□□□□ -0.56
VSIG4-204ENST00000455586 A1BGP04217 495 aa11.57□□□□□ -0.56
VSIG4-204ENST00000455586 GNAI2P04899 355 aa11.57□□□□□ -0.56
VSIG4-204ENST00000455586 NBPF7P0C2Y1 421 aaPredicted RBP11.57□□□□□ -0.56
VSIG4-204ENST00000455586 FAM98CQ17RN3 349 aaKnown RBP11.57□□□□□ -0.56
VSIG4-204ENST00000455586 BEND3Q5T5X7 828 aa11.57□□□□□ -0.56
VSIG4-204ENST00000455586 COPS6Q7L5N1 327 aa11.57□□□□□ -0.56
VSIG4-204ENST00000455586 XAGE3Q8WTP9 111 aa11.57□□□□□ -0.56
VSIG4-204ENST00000455586 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
VSIG4-204ENST00000455586 DAXXQ9UER7 740 aaPredicted RBP11.57□□□□□ -0.56
VSIG4-204ENST00000455586 TBC1D32Q96NH3 1257 aa11.56□□□□□ -0.56
VSIG4-204ENST00000455586 SRCIN1Q9C0H9 1055 aa11.56□□□□□ -0.56
VSIG4-204ENST00000455586 TOGARAM1Q9Y4F4 1720 aa11.56□□□□□ -0.56
VSIG4-204ENST00000455586 LRRFIP2Q9Y608 721 aaKnown RBP11.56□□□□□ -0.56
VSIG4-204ENST00000455586 SPATA31A5Q5VU36 1347 aa11.56□□□□□ -0.56
VSIG4-204ENST00000455586 SPATA31A7Q8IWB4 1347 aa11.56□□□□□ -0.56
VSIG4-204ENST00000455586 JCADQ9P266 1359 aa11.56□□□□□ -0.56
VSIG4-204ENST00000455586 PRIM1P49642 420 aaKnown RBP11.55□□□□□ -0.56
VSIG4-204ENST00000455586 DDB1Q16531 1140 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
VSIG4-204ENST00000455586 PNMA6EA0A0J9YXQ4 647 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 NBPF26B4DH59 902 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 SMARCA5O60264 1052 aaPredicted RBP11.55□□□□□ -0.56
VSIG4-204ENST00000455586 NBPF14Q5TI25 921 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 NBPF10Q6P3W6 841 aaKnown RBP11.55□□□□□ -0.56
VSIG4-204ENST00000455586 LRP10Q7Z4F1 713 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 UNC5CLQ8IV45 518 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 NBPF15Q8N660 670 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 MARCH10Q8NA82 808 aaPredicted RBP11.55□□□□□ -0.56
VSIG4-204ENST00000455586 JARID2Q92833 1246 aaPredicted RBP11.55□□□□□ -0.56
VSIG4-204ENST00000455586 ATG3Q9NT62 314 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 HYPKQ9NX55 129 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 ZNF330Q9Y3S2 320 aaPredicted RBP11.55□□□□□ -0.56
VSIG4-204ENST00000455586 SLIT2O94813 1529 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 EP400Q96L91 3159 aa11.55□□□□□ -0.56
VSIG4-204ENST00000455586 LRP6O75581 1613 aa11.54□□□□□ -0.56
VSIG4-204ENST00000455586 FAM182BQ5T319 152 aa11.54□□□□□ -0.56
VSIG4-204ENST00000455586 KSR2Q6VAB6 950 aa11.54□□□□□ -0.56
VSIG4-204ENST00000455586 C16orf71Q8IYS4 520 aaPredicted RBP11.54□□□□□ -0.56
VSIG4-204ENST00000455586 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
VSIG4-204ENST00000455586 NRAPQ86VF7 1730 aa11.53□□□□□ -0.56
VSIG4-204ENST00000455586 BCL9LQ86UU0 1499 aa11.53□□□□□ -0.56
VSIG4-204ENST00000455586 UBTFL1P0CB47 393 aaPredicted RBP11.53□□□□□ -0.56
VSIG4-204ENST00000455586 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
VSIG4-204ENST00000455586 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
VSIG4-204ENST00000455586 KCPQ6ZWJ8 1503 aa11.53□□□□□ -0.56
VSIG4-204ENST00000455586 GLI3P10071 1580 aa11.53□□□□□ -0.56
VSIG4-204ENST00000455586 TTLL7Q6ZT98 887 aa11.52□□□□□ -0.56
VSIG4-204ENST00000455586 MYD88Q99836 296 aa11.52□□□□□ -0.56
VSIG4-204ENST00000455586 USP21Q9UK80 565 aa11.52□□□□□ -0.56
VSIG4-204ENST00000455586 EXOC6BQ9Y2D4 811 aa11.52□□□□□ -0.56
VSIG4-204ENST00000455586 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
VSIG4-204ENST00000455586 KCNQ2O43526 872 aa11.52□□□□□ -0.57
VSIG4-204ENST00000455586 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
VSIG4-204ENST00000455586 OTUD7AQ8TE49 926 aaPredicted RBP11.52□□□□□ -0.57
VSIG4-204ENST00000455586 MFAP1P55081 439 aaKnown RBP11.51□□□□□ -0.57
VSIG4-204ENST00000455586 BECN1Q14457 450 aa11.51□□□□□ -0.57
VSIG4-204ENST00000455586 MEX3CQ5U5Q3 659 aaKnown RBP11.51□□□□□ -0.57
VSIG4-204ENST00000455586 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
VSIG4-204ENST00000455586 PTF1AQ7RTS3 328 aa11.51□□□□□ -0.57
VSIG4-204ENST00000455586 PLEKHM2Q8IWE5 1019 aa11.51□□□□□ -0.57
VSIG4-204ENST00000455586 TNS2Q63HR2 1409 aa11.51□□□□□ -0.57
VSIG4-204ENST00000455586 ARXQ96QS3 562 aa11.51□□□□□ -0.57
VSIG4-204ENST00000455586 THRAP3Q9Y2W1 955 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms