RNA–Protein interactions for RNA: ENST00000455580.5

PPP1CB-208, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 3

Gene PPP1CB, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-208ENST00000455580 MCM10Q7L590 875 aa31.95■■■□□ 2.71
PPP1CB-208ENST00000455580 FMNL2Q96PY5 1086 aa31.95■■■□□ 2.71
PPP1CB-208ENST00000455580 KCNQ3O43525 872 aa31.94■■■□□ 2.7
PPP1CB-208ENST00000455580 USPL1Q5W0Q7 1092 aa31.94■■■□□ 2.7
PPP1CB-208ENST00000455580 NARFQ9UHQ1 456 aa31.94■■■□□ 2.7
PPP1CB-208ENST00000455580 CANXP27824 592 aaKnown RBP31.93■■■□□ 2.7
PPP1CB-208ENST00000455580 TM4SF1P30408 202 aa31.93■■■□□ 2.7
PPP1CB-208ENST00000455580 PLEKHF1Q96S99 279 aa31.92■■■□□ 2.7
PPP1CB-208ENST00000455580 COL15A1P39059 1388 aa31.92■■■□□ 2.7
PPP1CB-208ENST00000455580 C10orf71Q711Q0 1435 aa31.92■■■□□ 2.7
PPP1CB-208ENST00000455580 DDR1Q08345 913 aa31.91■■■□□ 2.7
PPP1CB-208ENST00000455580 DCTN1Q14203 1278 aa31.91■■■□□ 2.7
PPP1CB-208ENST00000455580 NEFMP07197 916 aa31.9■■■□□ 2.7
PPP1CB-208ENST00000455580 EIF5P55010 431 aaKnown RBP31.9■■■□□ 2.7
PPP1CB-208ENST00000455580 WWC3Q9ULE0 1092 aa31.9■■■□□ 2.7
PPP1CB-208ENST00000455580 KIF13BQ9NQT8 1826 aa31.89■■■□□ 2.7
PPP1CB-208ENST00000455580 PXDNLA1KZ92 1463 aa31.89■■■□□ 2.7
PPP1CB-208ENST00000455580 A0A0G2JLW4 131 aa31.88■■■□□ 2.69
PPP1CB-208ENST00000455580 POLRMTO00411 1230 aaKnown RBP31.87■■■□□ 2.69
PPP1CB-208ENST00000455580 PNNQ9H307 717 aaKnown RBP31.87■■■□□ 2.69
PPP1CB-208ENST00000455580 BCL2L12Q9HB09 334 aa31.87■■■□□ 2.69
PPP1CB-208ENST00000455580 A0A087WZG4 1122 aa31.85■■■□□ 2.69
PPP1CB-208ENST00000455580 DPEP1P16444 411 aa31.85■■■□□ 2.69
PPP1CB-208ENST00000455580 TAF7Q15545 349 aaPredicted RBP31.84■■■□□ 2.69
PPP1CB-208ENST00000455580 A1BGP04217 495 aa31.83■■■□□ 2.69
PPP1CB-208ENST00000455580 IL6STP40189 918 aaPredicted RBP31.83■■■□□ 2.69
PPP1CB-208ENST00000455580 NFIXQ14938 502 aa31.83■■■□□ 2.69
PPP1CB-208ENST00000455580 USP16Q9Y5T5 823 aa31.83■■■□□ 2.69
PPP1CB-208ENST00000455580 KIAA1551Q9HCM1 1747 aa31.83■■■□□ 2.69
PPP1CB-208ENST00000455580 NFE2L2Q16236 605 aa31.82■■■□□ 2.68
PPP1CB-208ENST00000455580 KCNA3P22001 575 aa31.81■■■□□ 2.68
PPP1CB-208ENST00000455580 MYBBP1AQ9BQG0 1328 aaKnown RBP31.8■■■□□ 2.68
PPP1CB-208ENST00000455580 SNRPA1P09661 255 aaKnown RBP31.8■■■□□ 2.68
PPP1CB-208ENST00000455580 N4BP2Q86UW6 1770 aaPredicted RBP31.79■■■□□ 2.68
PPP1CB-208ENST00000455580 PRAMEF22A3QJZ6 481 aa31.79■■■□□ 2.68
PPP1CB-208ENST00000455580 BCS1LQ9Y276 419 aa31.78■■■□□ 2.68
PPP1CB-208ENST00000455580 MAPK8IP3Q9UPT6 1336 aa31.77■■■□□ 2.68
PPP1CB-208ENST00000455580 MIS18AQ9NYP9 233 aa31.77■■■□□ 2.68
PPP1CB-208ENST00000455580 TBC1D2BQ9UPU7 963 aa31.77■■■□□ 2.68
PPP1CB-208ENST00000455580 ZNF330Q9Y3S2 320 aaPredicted RBP31.77■■■□□ 2.68
PPP1CB-208ENST00000455580 SERPINB2P05120 415 aa31.76■■■□□ 2.67
PPP1CB-208ENST00000455580 PNISRQ8TF01 805 aaKnown RBP31.75■■■□□ 2.67
PPP1CB-208ENST00000455580 PIM2Q9P1W9 311 aa31.75■■■□□ 2.67
PPP1CB-208ENST00000455580 NPM2Q86SE8 214 aaKnown RBP31.74■■■□□ 2.67
PPP1CB-208ENST00000455580 DLG5Q8TDM6 1919 aa31.73■■■□□ 2.67
PPP1CB-208ENST00000455580 TBC1D9BQ66K14 1250 aa31.72■■■□□ 2.67
PPP1CB-208ENST00000455580 CHRNA5P30532 468 aa31.71■■■□□ 2.67
PPP1CB-208ENST00000455580 BICDL1Q6ZP65 573 aa31.71■■■□□ 2.67
PPP1CB-208ENST00000455580 THUMPD2Q9BTF0 503 aaKnown RBP31.71■■■□□ 2.67
PPP1CB-208ENST00000455580 CAMTA2O94983 1202 aa31.7■■■□□ 2.67
PPP1CB-208ENST00000455580 PIP4K2AP48426 406 aaPredicted RBP31.7■■■□□ 2.67
PPP1CB-208ENST00000455580 RIPK4P57078 832 aa31.68■■■□□ 2.66
PPP1CB-208ENST00000455580 DALRD3Q5D0E6 543 aaKnown RBP31.68■■■□□ 2.66
PPP1CB-208ENST00000455580 DZIP3Q86Y13 1208 aaKnown RBP31.68■■■□□ 2.66
PPP1CB-208ENST00000455580 PRKRIP1Q9H875 184 aaPredicted RBP31.68■■■□□ 2.66
PPP1CB-208ENST00000455580 NRXN2Q9P2S2 1712 aa31.68■■■□□ 2.66
PPP1CB-208ENST00000455580 AFDNP55196 1824 aaKnown RBP31.68■■■□□ 2.66
PPP1CB-208ENST00000455580 ADCY9O60503 1353 aa31.68■■■□□ 2.66
PPP1CB-208ENST00000455580 NBPF26B4DH59 902 aa31.67■■■□□ 2.66
PPP1CB-208ENST00000455580 NBPF10Q6P3W6 841 aaKnown RBP31.67■■■□□ 2.66
PPP1CB-208ENST00000455580 ARHGAP27Q6ZUM4 889 aa31.67■■■□□ 2.66
PPP1CB-208ENST00000455580 NBPF15Q8N660 670 aa31.67■■■□□ 2.66
PPP1CB-208ENST00000455580 BRCA1P38398 1863 aaKnown RBP31.67■■■□□ 2.66
PPP1CB-208ENST00000455580 ATP10DQ9P241 1426 aa31.66■■■□□ 2.66
PPP1CB-208ENST00000455580 ZEB1P37275 1124 aaPredicted RBP31.66■■■□□ 2.66
PPP1CB-208ENST00000455580 EIF4A1P60842 406 aaKnown RBP31.66■■■□□ 2.66
PPP1CB-208ENST00000455580 TMPOP42166 694 aaKnown RBP31.65■■■□□ 2.66
PPP1CB-208ENST00000455580 GIGYF1O75420 1035 aaPredicted RBP31.64■■■□□ 2.66
PPP1CB-208ENST00000455580 SCN7AQ01118 1682 aa31.63■■■□□ 2.65
PPP1CB-208ENST00000455580 CLEC4GQ6UXB4 293 aa31.62■■■□□ 2.65
PPP1CB-208ENST00000455580 SETDB2Q96T68 719 aa31.62■■■□□ 2.65
PPP1CB-208ENST00000455580 CARMIL3Q8ND23 1372 aa31.61■■■□□ 2.65
PPP1CB-208ENST00000455580 KDM3BQ7LBC6 1761 aa31.61■■■□□ 2.65
PPP1CB-208ENST00000455580 C1QTNF8P60827 252 aa31.6■■■□□ 2.65
PPP1CB-208ENST00000455580 WDR43Q15061 677 aaKnown RBP eCLIP31.6■■■□□ 2.65
PPP1CB-208ENST00000455580 CCDC146Q8IYE0 955 aa31.6■■■□□ 2.65
PPP1CB-208ENST00000455580 LMOD3Q0VAK6 560 aa31.59■■■□□ 2.65
PPP1CB-208ENST00000455580 PRR5LQ6MZQ0 368 aa31.59■■■□□ 2.65
PPP1CB-208ENST00000455580 C2CD5Q86YS7 1000 aa31.59■■■□□ 2.65
PPP1CB-208ENST00000455580 ADAMTS8Q9UP79 889 aa31.59■■■□□ 2.65
PPP1CB-208ENST00000455580 H0YIN7 160 aa31.58■■■□□ 2.65
PPP1CB-208ENST00000455580 RUNDC1Q96C34 613 aa31.58■■■□□ 2.65
PPP1CB-208ENST00000455580 BRIP1Q9BX63 1249 aa31.58■■■□□ 2.65
PPP1CB-208ENST00000455580 GPBP1L1Q9HC44 474 aaPredicted RBP31.58■■■□□ 2.65
PPP1CB-208ENST00000455580 BABAM1Q9NWV8 329 aa31.58■■■□□ 2.65
PPP1CB-208ENST00000455580 ARFGEF1Q9Y6D6 1849 aa31.58■■■□□ 2.65
PPP1CB-208ENST00000455580 RGL2O15211 777 aa31.57■■■□□ 2.64
PPP1CB-208ENST00000455580 TSPYL4Q9UJ04 414 aa31.57■■■□□ 2.64
PPP1CB-208ENST00000455580 ZNF652Q9Y2D9 606 aa31.57■■■□□ 2.64
PPP1CB-208ENST00000455580 PDZRN3Q9UPQ7 1066 aa31.56■■■□□ 2.64
PPP1CB-208ENST00000455580 RRP7AQ9Y3A4 280 aaKnown RBP31.56■■■□□ 2.64
PPP1CB-208ENST00000455580 PDE6BP35913 854 aa31.55■■■□□ 2.64
PPP1CB-208ENST00000455580 CCDC24Q8N4L8 307 aa31.55■■■□□ 2.64
PPP1CB-208ENST00000455580 TTLL6Q8N841 843 aa31.55■■■□□ 2.64
PPP1CB-208ENST00000455580 BCORQ6W2J9 1755 aa31.54■■■□□ 2.64
PPP1CB-208ENST00000455580 NEUROD2Q15784 382 aa31.54■■■□□ 2.64
PPP1CB-208ENST00000455580 ZNF526Q8TF50 670 aaPredicted RBP31.54■■■□□ 2.64
PPP1CB-208ENST00000455580 CNBD1Q8NA66 436 aa31.53■■■□□ 2.64
PPP1CB-208ENST00000455580 LAMB4A4D0S4 1761 aa31.51■■■□□ 2.64
PPP1CB-208ENST00000455580 C9orf131Q5VYM1 1079 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms