RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 SNX21Q969T3 373 aa16.55■□□□□ 0.24
LINC00343-203ENST00000454555 DDX11L8A8MPP1 907 aa16.54■□□□□ 0.24
LINC00343-203ENST00000454555 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
LINC00343-203ENST00000454555 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
LINC00343-203ENST00000454555 CIZ1Q9ULV3 898 aaPredicted RBP16.54■□□□□ 0.24
LINC00343-203ENST00000454555 BRWD3Q6RI45 1802 aa16.53■□□□□ 0.24
LINC00343-203ENST00000454555 NUCB1Q02818 461 aa16.53■□□□□ 0.24
LINC00343-203ENST00000454555 FAM196AQ6ZSG2 479 aa16.53■□□□□ 0.24
LINC00343-203ENST00000454555 TSR2Q969E8 191 aaKnown RBP16.53■□□□□ 0.24
LINC00343-203ENST00000454555 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
LINC00343-203ENST00000454555 GCC1Q96CN9 775 aa16.52■□□□□ 0.24
LINC00343-203ENST00000454555 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
LINC00343-203ENST00000454555 ANO8Q9HCE9 1232 aaPredicted RBP16.52■□□□□ 0.24
LINC00343-203ENST00000454555 NOB1Q9ULX3 412 aaKnown RBP16.52■□□□□ 0.24
LINC00343-203ENST00000454555 SCN11AQ9UI33 1791 aa16.52■□□□□ 0.23
LINC00343-203ENST00000454555 FSD2A1L4K1 749 aa16.51■□□□□ 0.23
LINC00343-203ENST00000454555 GOLGA6L3A6NEY3 463 aa16.51■□□□□ 0.23
LINC00343-203ENST00000454555 TEFQ10587 303 aa16.51■□□□□ 0.23
LINC00343-203ENST00000454555 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
LINC00343-203ENST00000454555 MRC1P22897 1456 aa16.51■□□□□ 0.23
LINC00343-203ENST00000454555 CABP4P57796 275 aa16.51■□□□□ 0.23
LINC00343-203ENST00000454555 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
LINC00343-203ENST00000454555 MFAP1P55081 439 aaKnown RBP16.5■□□□□ 0.23
LINC00343-203ENST00000454555 TAF7Q15545 349 aaPredicted RBP16.5■□□□□ 0.23
LINC00343-203ENST00000454555 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
LINC00343-203ENST00000454555 NFATC2IPQ8NCF5 419 aa16.5■□□□□ 0.23
LINC00343-203ENST00000454555 BABAM1Q9NWV8 329 aa16.5■□□□□ 0.23
LINC00343-203ENST00000454555 ZNF853P0CG23 659 aa16.49■□□□□ 0.23
LINC00343-203ENST00000454555 PRIM1P49642 420 aaKnown RBP16.49■□□□□ 0.23
LINC00343-203ENST00000454555 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
LINC00343-203ENST00000454555 IFT57Q9NWB7 429 aa16.49■□□□□ 0.23
LINC00343-203ENST00000454555 TMOD3Q9NYL9 352 aa16.49■□□□□ 0.23
LINC00343-203ENST00000454555 TOGARAM1Q9Y4F4 1720 aa16.49■□□□□ 0.23
LINC00343-203ENST00000454555 CHL1O00533 1208 aa16.48■□□□□ 0.23
LINC00343-203ENST00000454555 GNAI1P63096 354 aa16.48■□□□□ 0.23
LINC00343-203ENST00000454555 CHD1LQ86WJ1 897 aa16.48■□□□□ 0.23
LINC00343-203ENST00000454555 ACSBG1Q96GR2 724 aa16.48■□□□□ 0.23
LINC00343-203ENST00000454555 PIGBQ92521 554 aa16.47■□□□□ 0.23
LINC00343-203ENST00000454555 DOT1LQ8TEK3 1739 aa16.46■□□□□ 0.23
LINC00343-203ENST00000454555 KCNQ2O43526 872 aa16.46■□□□□ 0.23
LINC00343-203ENST00000454555 MRE11P49959 708 aa16.46■□□□□ 0.23
LINC00343-203ENST00000454555 BTBD11A6QL63 1104 aa16.46■□□□□ 0.22
LINC00343-203ENST00000454555 DDIT3P35638 169 aa16.46■□□□□ 0.22
LINC00343-203ENST00000454555 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.22
LINC00343-203ENST00000454555 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.22
LINC00343-203ENST00000454555 SKOR2Q2VWA4 1001 aaPredicted RBP16.45■□□□□ 0.22
LINC00343-203ENST00000454555 SIPA1L3O60292 1781 aaPredicted RBP16.45■□□□□ 0.22
LINC00343-203ENST00000454555 TRAK2O60296 914 aa16.44■□□□□ 0.22
LINC00343-203ENST00000454555 GBP4Q96PP9 640 aa16.44■□□□□ 0.22
LINC00343-203ENST00000454555 NHSQ6T4R5 1651 aa16.44■□□□□ 0.22
LINC00343-203ENST00000454555 ITGB4P16144 1822 aa16.44■□□□□ 0.22
LINC00343-203ENST00000454555 MBIPQ9NS73 344 aa16.43■□□□□ 0.22
LINC00343-203ENST00000454555 MIS18AQ9NYP9 233 aa16.43■□□□□ 0.22
LINC00343-203ENST00000454555 TSPYL4Q9UJ04 414 aa16.43■□□□□ 0.22
LINC00343-203ENST00000454555 ZNF790Q6PG37 636 aa16.42■□□□□ 0.22
LINC00343-203ENST00000454555 PTF1AQ7RTS3 328 aa16.42■□□□□ 0.22
LINC00343-203ENST00000454555 ATG3Q9NT62 314 aa16.42■□□□□ 0.22
LINC00343-203ENST00000454555 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
LINC00343-203ENST00000454555 ABCC4O15439 1325 aa16.42■□□□□ 0.22
LINC00343-203ENST00000454555 ZBTB7BO15156 539 aaPredicted RBP16.41■□□□□ 0.22
LINC00343-203ENST00000454555 TRIM37O94972 964 aa16.41■□□□□ 0.22
LINC00343-203ENST00000454555 XRCC6P12956 609 aaKnown RBP eCLIP16.41■□□□□ 0.22
LINC00343-203ENST00000454555 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
LINC00343-203ENST00000454555 TTC5Q8N0Z6 440 aa16.41■□□□□ 0.22
LINC00343-203ENST00000454555 SMARCC1Q92922 1105 aaPredicted RBP16.41■□□□□ 0.22
LINC00343-203ENST00000454555 ASAP1Q9ULH1 1129 aa16.41■□□□□ 0.22
LINC00343-203ENST00000454555 KCNQ3O43525 872 aa16.4■□□□□ 0.22
LINC00343-203ENST00000454555 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
LINC00343-203ENST00000454555 API5Q9BZZ5 524 aaKnown RBP16.4■□□□□ 0.22
LINC00343-203ENST00000454555 VAMP4O75379 141 aa16.39■□□□□ 0.21
LINC00343-203ENST00000454555 EIF4A1P60842 406 aaKnown RBP16.39■□□□□ 0.21
LINC00343-203ENST00000454555 PAPPAQ13219 1627 aa16.39■□□□□ 0.21
LINC00343-203ENST00000454555 KDM3BQ7LBC6 1761 aa16.39■□□□□ 0.21
LINC00343-203ENST00000454555 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
LINC00343-203ENST00000454555 LNPKQ9C0E8 428 aa16.38■□□□□ 0.21
LINC00343-203ENST00000454555 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
LINC00343-203ENST00000454555 CLEC17AQ6ZS10 378 aa16.37■□□□□ 0.21
LINC00343-203ENST00000454555 ZNF496Q96IT1 587 aaPredicted RBP16.37■□□□□ 0.21
LINC00343-203ENST00000454555 FMNL2Q96PY5 1086 aa16.37■□□□□ 0.21
LINC00343-203ENST00000454555 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
LINC00343-203ENST00000454555 BTAF1O14981 1849 aa16.36■□□□□ 0.21
LINC00343-203ENST00000454555 CLCN1P35523 988 aa16.36■□□□□ 0.21
LINC00343-203ENST00000454555 VSIG10Q8N0Z9 540 aa16.36■□□□□ 0.21
LINC00343-203ENST00000454555 KAT6BQ8WYB5 2073 aa16.36■□□□□ 0.21
LINC00343-203ENST00000454555 KCPQ6ZWJ8 1503 aa16.36■□□□□ 0.21
LINC00343-203ENST00000454555 K7ELQ4 463 aaPredicted RBP16.36■□□□□ 0.21
LINC00343-203ENST00000454555 PLSCR1O15162 318 aa16.36■□□□□ 0.21
LINC00343-203ENST00000454555 CDC45O75419 566 aa16.36■□□□□ 0.21
LINC00343-203ENST00000454555 ANKRD45Q5TZF3 282 aa16.36■□□□□ 0.21
LINC00343-203ENST00000454555 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
LINC00343-203ENST00000454555 IBTKQ9P2D0 1353 aaPredicted RBP16.35■□□□□ 0.21
LINC00343-203ENST00000454555 GOLGA6L22H0YM25 854 aa16.35■□□□□ 0.21
LINC00343-203ENST00000454555 GRPEL1Q9HAV7 217 aa16.35■□□□□ 0.21
LINC00343-203ENST00000454555 SOS1Q07889 1333 aaPredicted RBP16.35■□□□□ 0.21
LINC00343-203ENST00000454555 UBR2Q8IWV8 1755 aa16.35■□□□□ 0.21
LINC00343-203ENST00000454555 PTCD1O75127 700 aaKnown RBP16.34■□□□□ 0.21
LINC00343-203ENST00000454555 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
LINC00343-203ENST00000454555 APBA3O96018 575 aa16.34■□□□□ 0.21
LINC00343-203ENST00000454555 C8orf58Q8NAV2 365 aa16.34■□□□□ 0.21
LINC00343-203ENST00000454555 SPRYD3Q8NCJ5 442 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms