RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 CYP19A1P11511 503 aaPredicted RBP9.63□□□□□ -0.87
CHEK2-220ENST00000454252 FSTL1Q12841 308 aa9.63□□□□□ -0.87
CHEK2-220ENST00000454252 BICDL1Q6ZP65 573 aa9.63□□□□□ -0.87
CHEK2-220ENST00000454252 MORC1Q86VD1 984 aa9.63□□□□□ -0.87
CHEK2-220ENST00000454252 MYH14Q7Z406 1995 aaKnown RBP9.63□□□□□ -0.87
CHEK2-220ENST00000454252 TJP1Q07157 1748 aa9.62□□□□□ -0.87
CHEK2-220ENST00000454252 NFKBIEO00221 500 aa9.62□□□□□ -0.87
CHEK2-220ENST00000454252 ZPR1O75312 459 aa9.62□□□□□ -0.87
CHEK2-220ENST00000454252 SLC52A2Q9HAB3 445 aa9.62□□□□□ -0.87
CHEK2-220ENST00000454252 ZNF219Q9P2Y4 722 aaPredicted RBP9.62□□□□□ -0.87
CHEK2-220ENST00000454252 WDR90Q96KV7 1748 aa9.62□□□□□ -0.87
CHEK2-220ENST00000454252 COL15A1P39059 1388 aa9.62□□□□□ -0.87
CHEK2-220ENST00000454252 ADAMTS7Q9UKP4 1686 aa9.61□□□□□ -0.87
CHEK2-220ENST00000454252 RNMTO43148 476 aaKnown RBP9.61□□□□□ -0.87
CHEK2-220ENST00000454252 SERPINB2P05120 415 aa9.61□□□□□ -0.87
CHEK2-220ENST00000454252 CANXP27824 592 aaKnown RBP9.61□□□□□ -0.87
CHEK2-220ENST00000454252 C2CD5Q86YS7 1000 aa9.61□□□□□ -0.87
CHEK2-220ENST00000454252 TNS4Q8IZW8 715 aa9.61□□□□□ -0.87
CHEK2-220ENST00000454252 SMC1BQ8NDV3 1235 aa9.61□□□□□ -0.87
CHEK2-220ENST00000454252 NARFQ9UHQ1 456 aa9.61□□□□□ -0.87
CHEK2-220ENST00000454252 BRCA1P38398 1863 aaKnown RBP9.6□□□□□ -0.87
CHEK2-220ENST00000454252 POTECB2RU33 542 aa9.6□□□□□ -0.87
CHEK2-220ENST00000454252 HSPA1AP0DMV8 641 aaKnown RBP9.6□□□□□ -0.87
CHEK2-220ENST00000454252 HSPA1BP0DMV9 641 aaKnown RBP9.6□□□□□ -0.87
CHEK2-220ENST00000454252 LMNB1P20700 586 aa9.6□□□□□ -0.87
CHEK2-220ENST00000454252 MTHFSDQ2M296 383 aaKnown RBP9.6□□□□□ -0.87
CHEK2-220ENST00000454252 AKAP4Q5JQC9 854 aa9.6□□□□□ -0.87
CHEK2-220ENST00000454252 ZNF831Q5JPB2 1677 aa9.6□□□□□ -0.87
CHEK2-220ENST00000454252 GLTPD2A6NH11 291 aa9.59□□□□□ -0.87
CHEK2-220ENST00000454252 POTEIP0CG38 1075 aa9.59□□□□□ -0.87
CHEK2-220ENST00000454252 POTEJP0CG39 1038 aa9.59□□□□□ -0.87
CHEK2-220ENST00000454252 CNGB1Q14028 1251 aaPredicted RBP9.59□□□□□ -0.87
CHEK2-220ENST00000454252 TBC1D9BQ66K14 1250 aa9.59□□□□□ -0.87
CHEK2-220ENST00000454252 TTLL6Q8N841 843 aa9.59□□□□□ -0.87
CHEK2-220ENST00000454252 C21orf2O43822 256 aa9.58□□□□□ -0.88
CHEK2-220ENST00000454252 EIF4G2P78344 907 aaKnown RBP eCLIP9.58□□□□□ -0.88
CHEK2-220ENST00000454252 AMER1Q5JTC6 1135 aaPredicted RBP9.58□□□□□ -0.88
CHEK2-220ENST00000454252 ZNF330Q9Y3S2 320 aaPredicted RBP9.58□□□□□ -0.88
CHEK2-220ENST00000454252 MRC1P22897 1456 aa9.58□□□□□ -0.88
CHEK2-220ENST00000454252 VEGFAP15692 232 aaPredicted RBP9.57□□□□□ -0.88
CHEK2-220ENST00000454252 PIP4K2AP48426 406 aaPredicted RBP9.57□□□□□ -0.88
CHEK2-220ENST00000454252 ZNF622Q969S3 477 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHEK2-220ENST00000454252 TBC1D2BQ9UPU7 963 aa9.57□□□□□ -0.88
CHEK2-220ENST00000454252 KNSTRNQ9Y448 316 aa9.57□□□□□ -0.88
CHEK2-220ENST00000454252 H0YIN7 160 aa9.56□□□□□ -0.88
CHEK2-220ENST00000454252 KCNQ3O43525 872 aa9.56□□□□□ -0.88
CHEK2-220ENST00000454252 EIF5P55010 431 aaKnown RBP9.56□□□□□ -0.88
CHEK2-220ENST00000454252 CC2D1BQ5T0F9 858 aaKnown RBP9.56□□□□□ -0.88
CHEK2-220ENST00000454252 PRR5LQ6MZQ0 368 aa9.56□□□□□ -0.88
CHEK2-220ENST00000454252 ZNF496Q96IT1 587 aaPredicted RBP9.56□□□□□ -0.88
CHEK2-220ENST00000454252 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
CHEK2-220ENST00000454252 ARFGEF1Q9Y6D6 1849 aa9.56□□□□□ -0.88
CHEK2-220ENST00000454252 DDNO94850 711 aaPredicted RBP9.55□□□□□ -0.88
CHEK2-220ENST00000454252 A1BGP04217 495 aa9.55□□□□□ -0.88
CHEK2-220ENST00000454252 ERFEQ4G0M1 354 aa9.55□□□□□ -0.88
CHEK2-220ENST00000454252 TIMELESSQ9UNS1 1208 aa9.55□□□□□ -0.88
CHEK2-220ENST00000454252 ZC3H4Q9UPT8 1303 aaKnown RBP9.55□□□□□ -0.88
CHEK2-220ENST00000454252 PRAMEF22A3QJZ6 481 aa9.54□□□□□ -0.88
CHEK2-220ENST00000454252 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
CHEK2-220ENST00000454252 VSIG10Q8N0Z9 540 aa9.54□□□□□ -0.88
CHEK2-220ENST00000454252 IL17REQ8NFR9 667 aa9.54□□□□□ -0.88
CHEK2-220ENST00000454252 TNRC6CQ9HCJ0 1690 aaKnown RBP9.54□□□□□ -0.88
CHEK2-220ENST00000454252 KIF7Q2M1P5 1343 aa9.54□□□□□ -0.88
CHEK2-220ENST00000454252 DIAPH1O60610 1272 aaKnown RBP9.53□□□□□ -0.88
CHEK2-220ENST00000454252 CAMTA2O94983 1202 aa9.53□□□□□ -0.88
CHEK2-220ENST00000454252 ZEB1P37275 1124 aaPredicted RBP9.53□□□□□ -0.88
CHEK2-220ENST00000454252 SLC51AQ86UW1 340 aa9.53□□□□□ -0.88
CHEK2-220ENST00000454252 TTC5Q8N0Z6 440 aa9.53□□□□□ -0.88
CHEK2-220ENST00000454252 NRXN2Q9P2S2 1712 aa9.53□□□□□ -0.88
CHEK2-220ENST00000454252 HEG1Q9ULI3 1381 aa9.52□□□□□ -0.88
CHEK2-220ENST00000454252 U2SURPO15042 1029 aaKnown RBP9.52□□□□□ -0.89
CHEK2-220ENST00000454252 STARD3NLO95772 234 aa9.52□□□□□ -0.89
CHEK2-220ENST00000454252 PRPF40BQ6NWY9 871 aaKnown RBP9.52□□□□□ -0.89
CHEK2-220ENST00000454252 ZNF790Q6PG37 636 aa9.52□□□□□ -0.89
CHEK2-220ENST00000454252 BRIP1Q9BX63 1249 aa9.52□□□□□ -0.89
CHEK2-220ENST00000454252 TAOK3Q9H2K8 898 aa9.52□□□□□ -0.89
CHEK2-220ENST00000454252 SCN11AQ9UI33 1791 aa9.52□□□□□ -0.89
CHEK2-220ENST00000454252 FOXN1O15353 648 aa9.51□□□□□ -0.89
CHEK2-220ENST00000454252 PDE6BP35913 854 aa9.51□□□□□ -0.89
CHEK2-220ENST00000454252 CHADLQ6NUI6 762 aa9.51□□□□□ -0.89
CHEK2-220ENST00000454252 DPY19L2Q6NUT2 758 aa9.51□□□□□ -0.89
CHEK2-220ENST00000454252 CNBD1Q8NA66 436 aa9.51□□□□□ -0.89
CHEK2-220ENST00000454252 PHACTR3Q96KR7 559 aa9.51□□□□□ -0.89
CHEK2-220ENST00000454252 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
CHEK2-220ENST00000454252 AFDNP55196 1824 aaKnown RBP9.51□□□□□ -0.89
CHEK2-220ENST00000454252 ZNF541Q9H0D2 1346 aa9.51□□□□□ -0.89
CHEK2-220ENST00000454252 COL11A2P13942 1736 aaPredicted RBP9.51□□□□□ -0.89
CHEK2-220ENST00000454252 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
CHEK2-220ENST00000454252 A0A087WZG4 1122 aa9.5□□□□□ -0.89
CHEK2-220ENST00000454252 FAM177BA6PVY3 158 aa9.5□□□□□ -0.89
CHEK2-220ENST00000454252 NPHP1O15259 732 aa9.5□□□□□ -0.89
CHEK2-220ENST00000454252 PER1O15534 1290 aaPredicted RBP9.5□□□□□ -0.89
CHEK2-220ENST00000454252 SRGNP10124 158 aa9.5□□□□□ -0.89
CHEK2-220ENST00000454252 TEFQ10587 303 aa9.5□□□□□ -0.89
CHEK2-220ENST00000454252 ZNF277Q9NRM2 450 aaPredicted RBP9.5□□□□□ -0.89
CHEK2-220ENST00000454252 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
CHEK2-220ENST00000454252 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
CHEK2-220ENST00000454252 SBF1O95248 1867 aa9.5□□□□□ -0.89
CHEK2-220ENST00000454252 GNAT3A8MTJ3 354 aa9.49□□□□□ -0.89
CHEK2-220ENST00000454252 IL6STP40189 918 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms