RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 BCS1LQ9Y276 419 aa24.51■■□□□ 1.51
SEC22C-212ENST00000454141 CEMIPQ8WUJ3 1361 aa24.51■■□□□ 1.51
SEC22C-212ENST00000454141 ZNF790Q6PG37 636 aa24.5■■□□□ 1.51
SEC22C-212ENST00000454141 POLRMTO00411 1230 aaKnown RBP24.49■■□□□ 1.51
SEC22C-212ENST00000454141 U2AF1L5P0DN76 240 aaPredicted RBP24.49■■□□□ 1.51
SEC22C-212ENST00000454141 U2AF1Q01081 240 aaKnown RBP eCLIP24.49■■□□□ 1.51
SEC22C-212ENST00000454141 ZNF496Q96IT1 587 aaPredicted RBP24.49■■□□□ 1.51
SEC22C-212ENST00000454141 NARFQ9UHQ1 456 aa24.49■■□□□ 1.51
SEC22C-212ENST00000454141 SIPA1L3O60292 1781 aaPredicted RBP24.48■■□□□ 1.51
SEC22C-212ENST00000454141 STARD3NLO95772 234 aa24.48■■□□□ 1.51
SEC22C-212ENST00000454141 TM4SF1P30408 202 aa24.48■■□□□ 1.51
SEC22C-212ENST00000454141 HEG1Q9ULI3 1381 aa24.48■■□□□ 1.51
SEC22C-212ENST00000454141 KCNA3P22001 575 aa24.46■■□□□ 1.51
SEC22C-212ENST00000454141 CANXP27824 592 aaKnown RBP24.46■■□□□ 1.51
SEC22C-212ENST00000454141 GPBP1L1Q9HC44 474 aaPredicted RBP24.46■■□□□ 1.51
SEC22C-212ENST00000454141 FCHSD2O94868 740 aa24.45■■□□□ 1.5
SEC22C-212ENST00000454141 TEX13AQ9BXU3 409 aaPredicted RBP24.45■■□□□ 1.5
SEC22C-212ENST00000454141 SENP3-EIF4A1A0A087X0R7 540 aa24.44■■□□□ 1.5
SEC22C-212ENST00000454141 ZNF526Q8TF50 670 aaPredicted RBP24.44■■□□□ 1.5
SEC22C-212ENST00000454141 FMNL2Q96PY5 1086 aa24.44■■□□□ 1.5
SEC22C-212ENST00000454141 BRCA1P38398 1863 aaKnown RBP24.43■■□□□ 1.5
SEC22C-212ENST00000454141 EIF5P55010 431 aaKnown RBP24.43■■□□□ 1.5
SEC22C-212ENST00000454141 NFIXQ14938 502 aa24.43■■□□□ 1.5
SEC22C-212ENST00000454141 BCL2L12Q9HB09 334 aa24.43■■□□□ 1.5
SEC22C-212ENST00000454141 PIM2Q9P1W9 311 aa24.43■■□□□ 1.5
SEC22C-212ENST00000454141 BTBD11A6QL63 1104 aa24.42■■□□□ 1.5
SEC22C-212ENST00000454141 RTF1Q92541 710 aaKnown RBP24.42■■□□□ 1.5
SEC22C-212ENST00000454141 A0A087WZG4 1122 aa24.41■■□□□ 1.5
SEC22C-212ENST00000454141 ARHGAP27Q6ZUM4 889 aa24.41■■□□□ 1.5
SEC22C-212ENST00000454141 CHRNA5P30532 468 aa24.4■■□□□ 1.5
SEC22C-212ENST00000454141 KCNQ3O43525 872 aa24.39■■□□□ 1.49
SEC22C-212ENST00000454141 DALRD3Q5D0E6 543 aaKnown RBP24.39■■□□□ 1.49
SEC22C-212ENST00000454141 MCM10Q7L590 875 aa24.39■■□□□ 1.49
SEC22C-212ENST00000454141 NRXN2Q9P2S2 1712 aa24.38■■□□□ 1.49
SEC22C-212ENST00000454141 ZNF330Q9Y3S2 320 aaPredicted RBP24.38■■□□□ 1.49
SEC22C-212ENST00000454141 SCN7AQ01118 1682 aa24.37■■□□□ 1.49
SEC22C-212ENST00000454141 SERPINB2P05120 415 aa24.37■■□□□ 1.49
SEC22C-212ENST00000454141 IL6STP40189 918 aaPredicted RBP24.37■■□□□ 1.49
SEC22C-212ENST00000454141 ARFGEF1Q9Y6D6 1849 aa24.36■■□□□ 1.49
SEC22C-212ENST00000454141 HTATSF1O43719 755 aaKnown RBP24.36■■□□□ 1.49
SEC22C-212ENST00000454141 A1BGP04217 495 aa24.35■■□□□ 1.49
SEC22C-212ENST00000454141 DCTN1Q14203 1278 aa24.35■■□□□ 1.49
SEC22C-212ENST00000454141 AFDNP55196 1824 aaKnown RBP24.35■■□□□ 1.49
SEC22C-212ENST00000454141 BICDL1Q6ZP65 573 aa24.34■■□□□ 1.49
SEC22C-212ENST00000454141 NPM2Q86SE8 214 aaKnown RBP24.34■■□□□ 1.49
SEC22C-212ENST00000454141 TBC1D2BQ9UPU7 963 aa24.34■■□□□ 1.49
SEC22C-212ENST00000454141 TBC1D9BQ66K14 1250 aa24.33■■□□□ 1.49
SEC22C-212ENST00000454141 CARMIL3Q8ND23 1372 aa24.32■■□□□ 1.48
SEC22C-212ENST00000454141 NEFMP07197 916 aa24.32■■□□□ 1.48
SEC22C-212ENST00000454141 SNRPA1P09661 255 aaKnown RBP24.31■■□□□ 1.48
SEC22C-212ENST00000454141 USP16Q9Y5T5 823 aa24.31■■□□□ 1.48
SEC22C-212ENST00000454141 PRAMEF22A3QJZ6 481 aa24.3■■□□□ 1.48
SEC22C-212ENST00000454141 CAMTA2O94983 1202 aa24.3■■□□□ 1.48
SEC22C-212ENST00000454141 C9orf131Q5VYM1 1079 aa24.3■■□□□ 1.48
SEC22C-212ENST00000454141 KIF3CO14782 793 aa24.29■■□□□ 1.48
SEC22C-212ENST00000454141 CEP350Q5VT06 3117 aa24.28■■□□□ 1.48
SEC22C-212ENST00000454141 TAF7Q15545 349 aaPredicted RBP24.28■■□□□ 1.48
SEC22C-212ENST00000454141 DZIP3Q86Y13 1208 aaKnown RBP24.28■■□□□ 1.48
SEC22C-212ENST00000454141 C2CD5Q86YS7 1000 aa24.28■■□□□ 1.48
SEC22C-212ENST00000454141 PLEKHF1Q96S99 279 aa24.28■■□□□ 1.48
SEC22C-212ENST00000454141 DLEC1Q9Y238 1755 aa24.28■■□□□ 1.48
SEC22C-212ENST00000454141 H0YIN7 160 aa24.27■■□□□ 1.48
SEC22C-212ENST00000454141 PIP4K2AP48426 406 aaPredicted RBP24.27■■□□□ 1.48
SEC22C-212ENST00000454141 BCORQ6W2J9 1755 aa24.26■■□□□ 1.47
SEC22C-212ENST00000454141 PRR5LQ6MZQ0 368 aa24.26■■□□□ 1.47
SEC22C-212ENST00000454141 RNF181Q9P0P0 153 aa24.26■■□□□ 1.47
SEC22C-212ENST00000454141 NFE2L2Q16236 605 aa24.25■■□□□ 1.47
SEC22C-212ENST00000454141 TTLL6Q8N841 843 aa24.25■■□□□ 1.47
SEC22C-212ENST00000454141 SETDB2Q96T68 719 aa24.25■■□□□ 1.47
SEC22C-212ENST00000454141 BRIP1Q9BX63 1249 aa24.24■■□□□ 1.47
SEC22C-212ENST00000454141 PNNQ9H307 717 aaKnown RBP24.24■■□□□ 1.47
SEC22C-212ENST00000454141 MAPK8IP3Q9UPT6 1336 aa24.24■■□□□ 1.47
SEC22C-212ENST00000454141 PDE6BP35913 854 aa24.23■■□□□ 1.47
SEC22C-212ENST00000454141 RALBP1Q15311 655 aa24.23■■□□□ 1.47
SEC22C-212ENST00000454141 CNBD1Q8NA66 436 aa24.23■■□□□ 1.47
SEC22C-212ENST00000454141 MIS18AQ9NYP9 233 aa24.23■■□□□ 1.47
SEC22C-212ENST00000454141 PDZRN3Q9UPQ7 1066 aa24.23■■□□□ 1.47
SEC22C-212ENST00000454141 RASSF7Q02833 373 aa24.22■■□□□ 1.47
SEC22C-212ENST00000454141 CCDC24Q8N4L8 307 aa24.22■■□□□ 1.47
SEC22C-212ENST00000454141 PNISRQ8TF01 805 aaKnown RBP24.22■■□□□ 1.47
SEC22C-212ENST00000454141 NBPF26B4DH59 902 aa24.21■■□□□ 1.47
SEC22C-212ENST00000454141 NPHP1O15259 732 aa24.21■■□□□ 1.47
SEC22C-212ENST00000454141 HSPA6P17066 643 aa24.21■■□□□ 1.47
SEC22C-212ENST00000454141 NBPF10Q6P3W6 841 aaKnown RBP24.21■■□□□ 1.47
SEC22C-212ENST00000454141 CLEC4GQ6UXB4 293 aa24.21■■□□□ 1.47
SEC22C-212ENST00000454141 NBPF15Q8N660 670 aa24.21■■□□□ 1.47
SEC22C-212ENST00000454141 NMRK2Q9NPI5 230 aa24.21■■□□□ 1.47
SEC22C-212ENST00000454141 ZNF652Q9Y2D9 606 aa24.21■■□□□ 1.47
SEC22C-212ENST00000454141 ANKRD31Q8N7Z5 1873 aa24.21■■□□□ 1.47
SEC22C-212ENST00000454141 DLG5Q8TDM6 1919 aa24.2■■□□□ 1.46
SEC22C-212ENST00000454141 ST5P78524 1137 aa24.2■■□□□ 1.46
SEC22C-212ENST00000454141 LAMB4A4D0S4 1761 aa24.19■■□□□ 1.46
SEC22C-212ENST00000454141 KDM3BQ7LBC6 1761 aa24.19■■□□□ 1.46
SEC22C-212ENST00000454141 ZNF622Q969S3 477 aaKnown RBP eCLIP24.19■■□□□ 1.46
SEC22C-212ENST00000454141 THUMPD2Q9BTF0 503 aaKnown RBP24.19■■□□□ 1.46
SEC22C-212ENST00000454141 COL11A2P13942 1736 aaPredicted RBP24.18■■□□□ 1.46
SEC22C-212ENST00000454141 KDM2BQ8NHM5 1336 aa24.18■■□□□ 1.46
SEC22C-212ENST00000454141 TOMM70O94826 608 aa24.18■■□□□ 1.46
SEC22C-212ENST00000454141 ZC3H4Q9UPT8 1303 aaKnown RBP24.17■■□□□ 1.46
SEC22C-212ENST00000454141 RGL2O15211 777 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms