RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
TNFRSF4-202ENST00000453580 C10orf71Q711Q0 1435 aa22.7■■□□□ 1.22
TNFRSF4-202ENST00000453580 ZNF496Q96IT1 587 aaPredicted RBP22.68■■□□□ 1.22
TNFRSF4-202ENST00000453580 FKBP8Q14318 412 aa22.67■■□□□ 1.22
TNFRSF4-202ENST00000453580 SRP68Q9UHB9 627 aaKnown RBP22.67■■□□□ 1.22
TNFRSF4-202ENST00000453580 ZBTB1Q9Y2K1 713 aa22.67■■□□□ 1.22
TNFRSF4-202ENST00000453580 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
TNFRSF4-202ENST00000453580 PXDNLA1KZ92 1463 aa22.66■■□□□ 1.22
TNFRSF4-202ENST00000453580 CANXP27824 592 aaKnown RBP22.65■■□□□ 1.22
TNFRSF4-202ENST00000453580 TM4SF1P30408 202 aa22.64■■□□□ 1.21
TNFRSF4-202ENST00000453580 N4BP2Q86UW6 1770 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF4-202ENST00000453580 MAPK8IP3Q9UPT6 1336 aa22.63■■□□□ 1.21
TNFRSF4-202ENST00000453580 IL6STP40189 918 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF4-202ENST00000453580 EIF5P55010 431 aaKnown RBP22.63■■□□□ 1.21
TNFRSF4-202ENST00000453580 A0A0G2JLW4 131 aa22.62■■□□□ 1.21
TNFRSF4-202ENST00000453580 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
TNFRSF4-202ENST00000453580 PIM2Q9P1W9 311 aa22.62■■□□□ 1.21
TNFRSF4-202ENST00000453580 KIAA1551Q9HCM1 1747 aa22.62■■□□□ 1.21
TNFRSF4-202ENST00000453580 POLRMTO00411 1230 aaKnown RBP22.61■■□□□ 1.21
TNFRSF4-202ENST00000453580 SNRPA1P09661 255 aaKnown RBP22.61■■□□□ 1.21
TNFRSF4-202ENST00000453580 TAF7Q15545 349 aaPredicted RBP22.61■■□□□ 1.21
TNFRSF4-202ENST00000453580 MCM10Q7L590 875 aa22.61■■□□□ 1.21
TNFRSF4-202ENST00000453580 BCS1LQ9Y276 419 aa22.61■■□□□ 1.21
TNFRSF4-202ENST00000453580 DPEP1P16444 411 aa22.6■■□□□ 1.21
TNFRSF4-202ENST00000453580 DDR1Q08345 913 aa22.6■■□□□ 1.21
TNFRSF4-202ENST00000453580 BRCA1P38398 1863 aaKnown RBP22.58■■□□□ 1.21
TNFRSF4-202ENST00000453580 UTRNP46939 3433 aa22.58■■□□□ 1.21
TNFRSF4-202ENST00000453580 GIGYF1O75420 1035 aaPredicted RBP22.58■■□□□ 1.21
TNFRSF4-202ENST00000453580 DDX10Q13206 875 aaKnown RBP22.58■■□□□ 1.21
TNFRSF4-202ENST00000453580 NFIXQ14938 502 aa22.58■■□□□ 1.21
TNFRSF4-202ENST00000453580 DLG5Q8TDM6 1919 aa22.58■■□□□ 1.21
TNFRSF4-202ENST00000453580 ARFGEF1Q9Y6D6 1849 aa22.57■■□□□ 1.2
TNFRSF4-202ENST00000453580 NFE2L2Q16236 605 aa22.57■■□□□ 1.2
TNFRSF4-202ENST00000453580 WWC3Q9ULE0 1092 aa22.57■■□□□ 1.2
TNFRSF4-202ENST00000453580 PDZRN3Q9UPQ7 1066 aa22.57■■□□□ 1.2
TNFRSF4-202ENST00000453580 ZNF330Q9Y3S2 320 aaPredicted RBP22.57■■□□□ 1.2
TNFRSF4-202ENST00000453580 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
TNFRSF4-202ENST00000453580 SERPINB2P05120 415 aa22.56■■□□□ 1.2
TNFRSF4-202ENST00000453580 DALRD3Q5D0E6 543 aaKnown RBP22.56■■□□□ 1.2
TNFRSF4-202ENST00000453580 PLEKHF1Q96S99 279 aa22.56■■□□□ 1.2
TNFRSF4-202ENST00000453580 NRXN2Q9P2S2 1712 aa22.56■■□□□ 1.2
TNFRSF4-202ENST00000453580 AFDNP55196 1824 aaKnown RBP22.55■■□□□ 1.2
TNFRSF4-202ENST00000453580 A1BGP04217 495 aa22.54■■□□□ 1.2
TNFRSF4-202ENST00000453580 DCTN1Q14203 1278 aa22.54■■□□□ 1.2
TNFRSF4-202ENST00000453580 BCL2L12Q9HB09 334 aa22.54■■□□□ 1.2
TNFRSF4-202ENST00000453580 GPBP1L1Q9HC44 474 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF4-202ENST00000453580 SCN7AQ01118 1682 aa22.54■■□□□ 1.2
TNFRSF4-202ENST00000453580 ATP10DQ9P241 1426 aa22.54■■□□□ 1.2
TNFRSF4-202ENST00000453580 RGL2O15211 777 aa22.53■■□□□ 1.2
TNFRSF4-202ENST00000453580 KCNQ3O43525 872 aa22.53■■□□□ 1.2
TNFRSF4-202ENST00000453580 LMOD3Q0VAK6 560 aa22.53■■□□□ 1.2
TNFRSF4-202ENST00000453580 ARHGAP27Q6ZUM4 889 aa22.53■■□□□ 1.2
TNFRSF4-202ENST00000453580 ZNF652Q9Y2D9 606 aa22.53■■□□□ 1.2
TNFRSF4-202ENST00000453580 ADCY9O60503 1353 aa22.52■■□□□ 1.2
TNFRSF4-202ENST00000453580 KCNA3P22001 575 aa22.52■■□□□ 1.2
TNFRSF4-202ENST00000453580 C1QTNF8P60827 252 aa22.52■■□□□ 1.2
TNFRSF4-202ENST00000453580 TBC1D2BQ9UPU7 963 aa22.52■■□□□ 1.2
TNFRSF4-202ENST00000453580 USP16Q9Y5T5 823 aa22.52■■□□□ 1.2
TNFRSF4-202ENST00000453580 CARMIL3Q8ND23 1372 aa22.51■■□□□ 1.19
TNFRSF4-202ENST00000453580 ZEB1P37275 1124 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF4-202ENST00000453580 CLEC4GQ6UXB4 293 aa22.51■■□□□ 1.19
TNFRSF4-202ENST00000453580 DZIP3Q86Y13 1208 aaKnown RBP22.51■■□□□ 1.19
TNFRSF4-202ENST00000453580 SETDB2Q96T68 719 aa22.51■■□□□ 1.19
TNFRSF4-202ENST00000453580 H0YIN7 160 aa22.5■■□□□ 1.19
TNFRSF4-202ENST00000453580 NPHP1O15259 732 aa22.5■■□□□ 1.19
TNFRSF4-202ENST00000453580 BICDL1Q6ZP65 573 aa22.5■■□□□ 1.19
TNFRSF4-202ENST00000453580 PDE6BP35913 854 aa22.49■■□□□ 1.19
TNFRSF4-202ENST00000453580 LAMB4A4D0S4 1761 aa22.48■■□□□ 1.19
TNFRSF4-202ENST00000453580 KDM3BQ7LBC6 1761 aa22.48■■□□□ 1.19
TNFRSF4-202ENST00000453580 GOLGB1Q14789 3259 aaKnown RBP22.48■■□□□ 1.19
TNFRSF4-202ENST00000453580 WDR43Q15061 677 aaKnown RBP eCLIP22.48■■□□□ 1.19
TNFRSF4-202ENST00000453580 TBC1D9BQ66K14 1250 aa22.48■■□□□ 1.19
TNFRSF4-202ENST00000453580 BABAM1Q9NWV8 329 aa22.48■■□□□ 1.19
TNFRSF4-202ENST00000453580 BCORQ6W2J9 1755 aa22.48■■□□□ 1.19
TNFRSF4-202ENST00000453580 DLEC1Q9Y238 1755 aa22.48■■□□□ 1.19
TNFRSF4-202ENST00000453580 CAMTA2O94983 1202 aa22.47■■□□□ 1.19
TNFRSF4-202ENST00000453580 CHRNA5P30532 468 aa22.47■■□□□ 1.19
TNFRSF4-202ENST00000453580 BRIP1Q9BX63 1249 aa22.47■■□□□ 1.19
TNFRSF4-202ENST00000453580 RIPK4P57078 832 aa22.46■■□□□ 1.19
TNFRSF4-202ENST00000453580 ST5P78524 1137 aa22.46■■□□□ 1.19
TNFRSF4-202ENST00000453580 C2CD5Q86YS7 1000 aa22.46■■□□□ 1.19
TNFRSF4-202ENST00000453580 TTLL6Q8N841 843 aa22.46■■□□□ 1.19
TNFRSF4-202ENST00000453580 CNBD1Q8NA66 436 aa22.45■■□□□ 1.18
TNFRSF4-202ENST00000453580 MIS18AQ9NYP9 233 aa22.44■■□□□ 1.18
TNFRSF4-202ENST00000453580 EIF4A1P60842 406 aaKnown RBP22.43■■□□□ 1.18
TNFRSF4-202ENST00000453580 ERBB4Q15303 1308 aa22.42■■□□□ 1.18
TNFRSF4-202ENST00000453580 PRAMEF22A3QJZ6 481 aa22.42■■□□□ 1.18
TNFRSF4-202ENST00000453580 PRR5LQ6MZQ0 368 aa22.42■■□□□ 1.18
TNFRSF4-202ENST00000453580 TMPOP42166 694 aaKnown RBP22.41■■□□□ 1.18
TNFRSF4-202ENST00000453580 TPTE2Q6XPS3 522 aa22.41■■□□□ 1.18
TNFRSF4-202ENST00000453580 ZNF526Q8TF50 670 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF4-202ENST00000453580 RUNDC1Q96C34 613 aa22.41■■□□□ 1.18
TNFRSF4-202ENST00000453580 TSPYL4Q9UJ04 414 aa22.41■■□□□ 1.18
TNFRSF4-202ENST00000453580 NBPF26B4DH59 902 aa22.4■■□□□ 1.18
TNFRSF4-202ENST00000453580 NBPF10Q6P3W6 841 aaKnown RBP22.4■■□□□ 1.18
TNFRSF4-202ENST00000453580 NBPF5PQ86XG9 351 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF4-202ENST00000453580 NBPF15Q8N660 670 aa22.4■■□□□ 1.18
TNFRSF4-202ENST00000453580 PRKRIP1Q9H875 184 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF4-202ENST00000453580 ZC3H4Q9UPT8 1303 aaKnown RBP22.39■■□□□ 1.18
TNFRSF4-202ENST00000453580 PIP4K2AP48426 406 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms