RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SLC4A2P04920 1241 aa20.03■□□□□ 0.8
SNX17-204ENST00000453453 ATF7IPQ6VMQ6 1270 aa20.03■□□□□ 0.8
SNX17-204ENST00000453453 NECTIN2Q92692 538 aa20.03■□□□□ 0.8
SNX17-204ENST00000453453 BRWD3Q6RI45 1802 aa20.03■□□□□ 0.8
SNX17-204ENST00000453453 NHSQ6T4R5 1651 aa20.03■□□□□ 0.8
SNX17-204ENST00000453453 RXRBP28702 533 aa20.02■□□□□ 0.79
SNX17-204ENST00000453453 API5Q9BZZ5 524 aaKnown RBP20.02■□□□□ 0.79
SNX17-204ENST00000453453 PTPRCP08575 1304 aa20.02■□□□□ 0.79
SNX17-204ENST00000453453 PTCD1O75127 700 aaKnown RBP20.01■□□□□ 0.79
SNX17-204ENST00000453453 DZIP1LQ8IYY4 767 aaKnown RBP20.01■□□□□ 0.79
SNX17-204ENST00000453453 ATG3Q9NT62 314 aa20.01■□□□□ 0.79
SNX17-204ENST00000453453 ASAP1Q9ULH1 1129 aa20.01■□□□□ 0.79
SNX17-204ENST00000453453 C20orf194Q5TEA3 1177 aa20■□□□□ 0.79
SNX17-204ENST00000453453 DBF4Q9UBU7 674 aaPredicted RBP20■□□□□ 0.79
SNX17-204ENST00000453453 TRIM27P14373 513 aa19.99■□□□□ 0.79
SNX17-204ENST00000453453 VSIG10Q8N0Z9 540 aa19.99■□□□□ 0.79
SNX17-204ENST00000453453 SMARCC1Q92922 1105 aaPredicted RBP19.99■□□□□ 0.79
SNX17-204ENST00000453453 TEX13AQ9BXU3 409 aaPredicted RBP19.99■□□□□ 0.79
SNX17-204ENST00000453453 SBF2Q86WG5 1849 aa19.99■□□□□ 0.79
SNX17-204ENST00000453453 KRT27Q7Z3Y8 459 aa19.98■□□□□ 0.79
SNX17-204ENST00000453453 NPM2Q86SE8 214 aaKnown RBP19.98■□□□□ 0.79
SNX17-204ENST00000453453 CRBNQ96SW2 442 aa19.98■□□□□ 0.79
SNX17-204ENST00000453453 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
SNX17-204ENST00000453453 CHPF2Q9P2E5 772 aa19.98■□□□□ 0.79
SNX17-204ENST00000453453 KDM2BQ8NHM5 1336 aa19.98■□□□□ 0.79
SNX17-204ENST00000453453 PRAMEF22A3QJZ6 481 aa19.98■□□□□ 0.79
SNX17-204ENST00000453453 CENPQQ7L2Z9 268 aaPredicted RBP19.98■□□□□ 0.79
SNX17-204ENST00000453453 PANK1Q8TE04 598 aa19.98■□□□□ 0.79
SNX17-204ENST00000453453 CLUAP1Q96AJ1 413 aa19.98■□□□□ 0.79
SNX17-204ENST00000453453 BTAF1O14981 1849 aa19.96■□□□□ 0.79
SNX17-204ENST00000453453 ERBB4Q15303 1308 aa19.96■□□□□ 0.79
SNX17-204ENST00000453453 FLIIQ13045 1269 aa19.96■□□□□ 0.79
SNX17-204ENST00000453453 HYPKQ9NX55 129 aa19.96■□□□□ 0.79
SNX17-204ENST00000453453 KCNQ2O43526 872 aa19.95■□□□□ 0.78
SNX17-204ENST00000453453 FAM196AQ6ZSG2 479 aa19.95■□□□□ 0.78
SNX17-204ENST00000453453 DDX21Q9NR30 783 aaKnown RBP eCLIP19.95■□□□□ 0.78
SNX17-204ENST00000453453 FKBP5Q13451 457 aaPredicted RBP19.94■□□□□ 0.78
SNX17-204ENST00000453453 FAM182BQ5T319 152 aa19.94■□□□□ 0.78
SNX17-204ENST00000453453 TNNQ9UQP3 1299 aa19.94■□□□□ 0.78
SNX17-204ENST00000453453 USP16Q9Y5T5 823 aa19.94■□□□□ 0.78
SNX17-204ENST00000453453 PALLDQ8WX93 1383 aa19.94■□□□□ 0.78
SNX17-204ENST00000453453 G2E3Q7L622 706 aa19.94■□□□□ 0.78
SNX17-204ENST00000453453 COG6Q9Y2V7 657 aa19.94■□□□□ 0.78
SNX17-204ENST00000453453 STARD3NLO95772 234 aa19.93■□□□□ 0.78
SNX17-204ENST00000453453 RLBP1P12271 317 aa19.93■□□□□ 0.78
SNX17-204ENST00000453453 MVPQ14764 893 aaKnown RBP19.93■□□□□ 0.78
SNX17-204ENST00000453453 ITPRIPQ8IWB1 547 aa19.93■□□□□ 0.78
SNX17-204ENST00000453453 RGS17Q9UGC6 210 aaPredicted RBP19.93■□□□□ 0.78
SNX17-204ENST00000453453 CICQ96RK0 1608 aaPredicted RBP19.93■□□□□ 0.78
SNX17-204ENST00000453453 TJP1Q07157 1748 aa19.93■□□□□ 0.78
SNX17-204ENST00000453453 ABCC4O15439 1325 aa19.92■□□□□ 0.78
SNX17-204ENST00000453453 CHMP4BQ9H444 224 aaKnown RBP19.92■□□□□ 0.78
SNX17-204ENST00000453453 ZNF831Q5JPB2 1677 aa19.92■□□□□ 0.78
SNX17-204ENST00000453453 AAMPQ13685 434 aa19.91■□□□□ 0.78
SNX17-204ENST00000453453 DDX19BQ9UMR2 479 aa19.91■□□□□ 0.78
SNX17-204ENST00000453453 RGS12O14924 1447 aa19.91■□□□□ 0.78
SNX17-204ENST00000453453 DDX58O95786 925 aaKnown RBP19.91■□□□□ 0.78
SNX17-204ENST00000453453 POTEAQ6S8J7 498 aa19.91■□□□□ 0.78
SNX17-204ENST00000453453 DNAJC10Q8IXB1 793 aa19.91■□□□□ 0.78
SNX17-204ENST00000453453 TMEM57Q8N5G2 664 aa19.91■□□□□ 0.78
SNX17-204ENST00000453453 PHAXQ9H814 394 aaKnown RBP19.91■□□□□ 0.78
SNX17-204ENST00000453453 N4BP2Q86UW6 1770 aaPredicted RBP19.9■□□□□ 0.78
SNX17-204ENST00000453453 ANXA1P04083 346 aa19.9■□□□□ 0.78
SNX17-204ENST00000453453 MYL6BP14649 208 aa19.9■□□□□ 0.78
SNX17-204ENST00000453453 GSE1Q14687 1217 aa19.9■□□□□ 0.78
SNX17-204ENST00000453453 BCL11BQ9C0K0 894 aaPredicted RBP19.9■□□□□ 0.78
SNX17-204ENST00000453453 PXDNLA1KZ92 1463 aa19.89■□□□□ 0.77
SNX17-204ENST00000453453 LOC102724428A0A0B4J2F2 783 aa19.89■□□□□ 0.77
SNX17-204ENST00000453453 SIK1P57059 783 aa19.89■□□□□ 0.77
SNX17-204ENST00000453453 PDIA6Q15084 440 aa19.89■□□□□ 0.77
SNX17-204ENST00000453453 PROSER3Q2NL68 480 aa19.89■□□□□ 0.77
SNX17-204ENST00000453453 ATP6V1AP38606 617 aa19.88■□□□□ 0.77
SNX17-204ENST00000453453 FAM161AQ3B820 660 aa19.88■□□□□ 0.77
SNX17-204ENST00000453453 ILDR2Q71H61 639 aa19.88■□□□□ 0.77
SNX17-204ENST00000453453 CCT4P50991 539 aaKnown RBP19.87■□□□□ 0.77
SNX17-204ENST00000453453 INTS3Q68E01 1043 aaKnown RBP19.87■□□□□ 0.77
SNX17-204ENST00000453453 SLC4A10Q6U841 1118 aa19.87■□□□□ 0.77
SNX17-204ENST00000453453 LY75O60449 1722 aa19.86■□□□□ 0.77
SNX17-204ENST00000453453 F6X3S4 739 aa19.86■□□□□ 0.77
SNX17-204ENST00000453453 A1BGP04217 495 aa19.86■□□□□ 0.77
SNX17-204ENST00000453453 AIMP1Q12904 312 aaKnown RBP19.86■□□□□ 0.77
SNX17-204ENST00000453453 IL27Q8NEV9 243 aa19.86■□□□□ 0.77
SNX17-204ENST00000453453 SLC4A9Q96Q91 983 aa19.86■□□□□ 0.77
SNX17-204ENST00000453453 COL5A3P25940 1745 aaPredicted RBP19.85■□□□□ 0.77
SNX17-204ENST00000453453 CYP19A1P11511 503 aaPredicted RBP19.85■□□□□ 0.77
SNX17-204ENST00000453453 PRKCSHP14314 528 aaPredicted RBP19.85■□□□□ 0.77
SNX17-204ENST00000453453 XAGE3Q8WTP9 111 aa19.85■□□□□ 0.77
SNX17-204ENST00000453453 DAXXQ9UER7 740 aaPredicted RBP19.85■□□□□ 0.77
SNX17-204ENST00000453453 NFKBIBQ15653 356 aa19.84■□□□□ 0.77
SNX17-204ENST00000453453 KSR2Q6VAB6 950 aa19.84■□□□□ 0.77
SNX17-204ENST00000453453 DNAAF4Q8WXU2 420 aa19.84■□□□□ 0.77
SNX17-204ENST00000453453 PI4KAP2A4QPH2 592 aa19.84■□□□□ 0.77
SNX17-204ENST00000453453 NBPF26B4DH59 902 aa19.84■□□□□ 0.77
SNX17-204ENST00000453453 PIP4K2AP48426 406 aaPredicted RBP19.84■□□□□ 0.77
SNX17-204ENST00000453453 NBPF14Q5TI25 921 aa19.84■□□□□ 0.77
SNX17-204ENST00000453453 NBPF10Q6P3W6 841 aaKnown RBP19.84■□□□□ 0.77
SNX17-204ENST00000453453 COPS6Q7L5N1 327 aa19.84■□□□□ 0.77
SNX17-204ENST00000453453 PTF1AQ7RTS3 328 aa19.84■□□□□ 0.77
SNX17-204ENST00000453453 NBPF15Q8N660 670 aa19.84■□□□□ 0.77
SNX17-204ENST00000453453 PI4KAP1Q8N8J0 262 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms