RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SBF1O95248 1867 aa19.46■□□□□ 0.71
LYSMD3-202ENST00000453259 COL15A1P39059 1388 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 DLEC1Q9Y238 1755 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 CYP19A1P11511 503 aaPredicted RBP19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 LMNB1P20700 586 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 CHRNA5P30532 468 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 USPL1Q5W0Q7 1092 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 HSPA5P11021 654 aaKnown RBP19.44■□□□□ 0.7
LYSMD3-202ENST00000453259 DNAJC10Q8IXB1 793 aa19.44■□□□□ 0.7
LYSMD3-202ENST00000453259 PDZRN3Q9UPQ7 1066 aa19.44■□□□□ 0.7
LYSMD3-202ENST00000453259 RRAGCQ9HB90 399 aa19.43■□□□□ 0.7
LYSMD3-202ENST00000453259 NFIXQ14938 502 aa19.42■□□□□ 0.7
LYSMD3-202ENST00000453259 GLTPD2A6NH11 291 aa19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 RNMTO43148 476 aaKnown RBP19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 VEGFAP15692 232 aaPredicted RBP19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 TTLL6Q8N841 843 aa19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 A0A087WZG4 1122 aa19.4■□□□□ 0.7
LYSMD3-202ENST00000453259 UBR2Q8IWV8 1755 aa19.39■□□□□ 0.7
LYSMD3-202ENST00000453259 H0YIN7 160 aa19.39■□□□□ 0.69
LYSMD3-202ENST00000453259 STARD3NLO95772 234 aa19.39■□□□□ 0.69
LYSMD3-202ENST00000453259 SERPINB2P05120 415 aa19.39■□□□□ 0.69
LYSMD3-202ENST00000453259 AMER1Q5JTC6 1135 aaPredicted RBP19.39■□□□□ 0.69
LYSMD3-202ENST00000453259 LGR6Q9HBX8 967 aa19.38■□□□□ 0.69
LYSMD3-202ENST00000453259 ZBTB1Q9Y2K1 713 aa19.38■□□□□ 0.69
LYSMD3-202ENST00000453259 TEX13AQ9BXU3 409 aaPredicted RBP19.37■□□□□ 0.69
LYSMD3-202ENST00000453259 TIAM2Q8IVF5 1701 aa19.37■□□□□ 0.69
LYSMD3-202ENST00000453259 RASSF7Q02833 373 aa19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 C2CD5Q86YS7 1000 aa19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 TTC5Q8N0Z6 440 aa19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 BCL2L12Q9HB09 334 aa19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 VIRMAQ69YN4 1812 aaKnown RBP19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 EIF5P55010 431 aaKnown RBP19.35■□□□□ 0.69
LYSMD3-202ENST00000453259 SLC39A6Q13433 755 aa19.35■□□□□ 0.69
LYSMD3-202ENST00000453259 DPY19L2Q6NUT2 758 aa19.35■□□□□ 0.69
LYSMD3-202ENST00000453259 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
LYSMD3-202ENST00000453259 PDE6BP35913 854 aa19.34■□□□□ 0.69
LYSMD3-202ENST00000453259 MTHFSDQ2M296 383 aaKnown RBP19.34■□□□□ 0.69
LYSMD3-202ENST00000453259 BRIP1Q9BX63 1249 aa19.34■□□□□ 0.69
LYSMD3-202ENST00000453259 SCN7AQ01118 1682 aa19.33■□□□□ 0.69
LYSMD3-202ENST00000453259 CARMIL3Q8ND23 1372 aa19.33■□□□□ 0.69
LYSMD3-202ENST00000453259 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.69
LYSMD3-202ENST00000453259 HTRA3P83110 453 aa19.33■□□□□ 0.68
LYSMD3-202ENST00000453259 NFKBIEO00221 500 aa19.32■□□□□ 0.68
LYSMD3-202ENST00000453259 HMOX1P09601 288 aa19.32■□□□□ 0.68
LYSMD3-202ENST00000453259 COL13A1Q5TAT6 717 aaPredicted RBP19.32■□□□□ 0.68
LYSMD3-202ENST00000453259 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
LYSMD3-202ENST00000453259 IL6STP40189 918 aaPredicted RBP19.31■□□□□ 0.68
LYSMD3-202ENST00000453259 SOGA3Q5TF21 947 aa19.31■□□□□ 0.68
LYSMD3-202ENST00000453259 HEG1Q9ULI3 1381 aa19.31■□□□□ 0.68
LYSMD3-202ENST00000453259 TEFQ10587 303 aa19.3■□□□□ 0.68
LYSMD3-202ENST00000453259 GAS2L2Q8NHY3 880 aa19.3■□□□□ 0.68
LYSMD3-202ENST00000453259 NPC1L1Q9UHC9 1359 aa19.3■□□□□ 0.68
LYSMD3-202ENST00000453259 PRELPP51888 382 aa19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 TNS4Q8IZW8 715 aa19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 DICER1Q9UPY3 1922 aaKnown RBP19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 GNAT3A8MTJ3 354 aa19.28■□□□□ 0.68
LYSMD3-202ENST00000453259 CNKSR1Q969H4 720 aa19.28■□□□□ 0.68
LYSMD3-202ENST00000453259 FER1L6Q2WGJ9 1857 aa19.28■□□□□ 0.68
LYSMD3-202ENST00000453259 ANKRD31Q8N7Z5 1873 aa19.27■□□□□ 0.68
LYSMD3-202ENST00000453259 ERFEQ4G0M1 354 aa19.27■□□□□ 0.68
LYSMD3-202ENST00000453259 PRR5LQ6MZQ0 368 aa19.27■□□□□ 0.68
LYSMD3-202ENST00000453259 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.68
LYSMD3-202ENST00000453259 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.67
LYSMD3-202ENST00000453259 KIF7Q2M1P5 1343 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 PCNTO95613 3336 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 RGL2O15211 777 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 TBC1D9BQ66K14 1250 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 STYK1Q6J9G0 422 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 BICDL1Q6ZP65 573 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 CNBD1Q8NA66 436 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 ZNF622Q969S3 477 aaKnown RBP eCLIP19.26■□□□□ 0.671e-8■□□□□ 9.7
LYSMD3-202ENST00000453259 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 TAOK3Q9H2K8 898 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 CCDC88AQ3V6T2 1871 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 COL3A1P02461 1466 aaPredicted RBP19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 CEMIPQ8WUJ3 1361 aa19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 ST5P78524 1137 aa19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 SETDB2Q96T68 719 aa19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 CREBZFQ9NS37 354 aa19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 COL11A2P13942 1736 aaPredicted RBP19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 ARFGEF2Q9Y6D5 1785 aa19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 POTECB2RU33 542 aa19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 C21orf2O43822 256 aa19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 HSPA1AP0DMV8 641 aaKnown RBP19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 HSPA1BP0DMV9 641 aaKnown RBP19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 IQCA1LA6NCM1 817 aa19.23■□□□□ 0.67
LYSMD3-202ENST00000453259 CHADLQ6NUI6 762 aa19.23■□□□□ 0.67
LYSMD3-202ENST00000453259 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
LYSMD3-202ENST00000453259 IL17REQ8NFR9 667 aa19.23■□□□□ 0.67
LYSMD3-202ENST00000453259 NPHP1O15259 732 aa19.22■□□□□ 0.67
LYSMD3-202ENST00000453259 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
LYSMD3-202ENST00000453259 BCORQ6W2J9 1755 aa19.21■□□□□ 0.67
LYSMD3-202ENST00000453259 CAMTA2O94983 1202 aa19.21■□□□□ 0.67
LYSMD3-202ENST00000453259 SRGNP10124 158 aa19.21■□□□□ 0.67
LYSMD3-202ENST00000453259 TBC1D2BQ9UPU7 963 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms