RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 MLH3Q9UHC1 1453 aa13.19□□□□□ -0.3
CHL1-208ENST00000453040 MUM1L1Q5H9M0 696 aa13.19□□□□□ -0.3
CHL1-208ENST00000453040 OSBPL3Q9H4L5 887 aa13.19□□□□□ -0.3
CHL1-208ENST00000453040 RPGRIP1LQ68CZ1 1315 aa13.19□□□□□ -0.3
CHL1-208ENST00000453040 PACS2Q86VP3 889 aa13.19□□□□□ -0.3
CHL1-208ENST00000453040 SDSP20132 328 aa13.18□□□□□ -0.3
CHL1-208ENST00000453040 INTS3Q68E01 1043 aaKnown RBP13.18□□□□□ -0.3
CHL1-208ENST00000453040 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
CHL1-208ENST00000453040 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
CHL1-208ENST00000453040 PRPF40AO75400 957 aaKnown RBP13.18□□□□□ -0.3
CHL1-208ENST00000453040 ICE2Q659A1 982 aa13.18□□□□□ -0.3
CHL1-208ENST00000453040 CFAP53Q96M91 514 aa13.18□□□□□ -0.3
CHL1-208ENST00000453040 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
CHL1-208ENST00000453040 PLA2G4AP47712 749 aa13.17□□□□□ -0.3
CHL1-208ENST00000453040 SYT10Q6XYQ8 523 aa13.17□□□□□ -0.3
CHL1-208ENST00000453040 RNF214Q8ND24 703 aa13.17□□□□□ -0.3
CHL1-208ENST00000453040 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
CHL1-208ENST00000453040 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
CHL1-208ENST00000453040 FBXO38Q6PIJ6 1188 aa13.17□□□□□ -0.3
CHL1-208ENST00000453040 MBIPQ9NS73 344 aa13.17□□□□□ -0.3
CHL1-208ENST00000453040 IPO8O15397 1037 aaKnown RBP13.16□□□□□ -0.3
CHL1-208ENST00000453040 FCHSD2O94868 740 aa13.16□□□□□ -0.3
CHL1-208ENST00000453040 CABP2Q9NPB3 220 aa13.16□□□□□ -0.3
CHL1-208ENST00000453040 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
CHL1-208ENST00000453040 REC8O95072 547 aa13.16□□□□□ -0.3
CHL1-208ENST00000453040 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
CHL1-208ENST00000453040 REXO1L1PQ8IX06 675 aa13.16□□□□□ -0.3
CHL1-208ENST00000453040 CALCOCO1Q9P1Z2 691 aa13.16□□□□□ -0.3
CHL1-208ENST00000453040 CEP83Q9Y592 693 aa13.16□□□□□ -0.3
CHL1-208ENST00000453040 KIF3BO15066 747 aa13.15□□□□□ -0.3
CHL1-208ENST00000453040 ANKRD44Q8N8A2 993 aa13.15□□□□□ -0.3
CHL1-208ENST00000453040 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
CHL1-208ENST00000453040 ATP7BP35670 1465 aa13.15□□□□□ -0.3
CHL1-208ENST00000453040 EVC2Q86UK5 1308 aa13.15□□□□□ -0.3
CHL1-208ENST00000453040 BMS1Q14692 1282 aaKnown RBP13.15□□□□□ -0.3
CHL1-208ENST00000453040 LRRN4CLQ8ND94 238 aa13.15□□□□□ -0.3
CHL1-208ENST00000453040 DIP2CQ9Y2E4 1556 aa13.15□□□□□ -0.3
CHL1-208ENST00000453040 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
CHL1-208ENST00000453040 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.31
CHL1-208ENST00000453040 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
CHL1-208ENST00000453040 ST5P78524 1137 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 CEP85Q6P2H3 762 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 RIMS2Q9UQ26 1411 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 RICTORQ6R327 1708 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 IL25Q9H293 177 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 RIMS1Q86UR5 1692 aaKnown RBP13.14□□□□□ -0.31
CHL1-208ENST00000453040 MYH15Q9Y2K3 1946 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 CPS1P31327 1500 aa13.14□□□□□ -0.31
CHL1-208ENST00000453040 MYO1CO00159 1063 aa13.13□□□□□ -0.31
CHL1-208ENST00000453040 IL13P35225 146 aa13.13□□□□□ -0.31
CHL1-208ENST00000453040 POGZQ7Z3K3 1410 aa13.13□□□□□ -0.31
CHL1-208ENST00000453040 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
CHL1-208ENST00000453040 PALD1Q9ULE6 856 aa13.13□□□□□ -0.31
CHL1-208ENST00000453040 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
CHL1-208ENST00000453040 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
CHL1-208ENST00000453040 THUMPD2Q9BTF0 503 aaKnown RBP13.13□□□□□ -0.31
CHL1-208ENST00000453040 C11orf91Q3C1V1 193 aa13.12□□□□□ -0.31
CHL1-208ENST00000453040 H2AFXP16104 143 aaPredicted RBP13.12□□□□□ -0.31
CHL1-208ENST00000453040 DONSONQ9NYP3 566 aa13.12□□□□□ -0.31
CHL1-208ENST00000453040 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
CHL1-208ENST00000453040 NFE2L2Q16236 605 aa13.12□□□□□ -0.31
CHL1-208ENST00000453040 MARF1Q9Y4F3 1742 aaKnown RBP13.12□□□□□ -0.31
CHL1-208ENST00000453040 MSH6P52701 1360 aa13.11□□□□□ -0.31
CHL1-208ENST00000453040 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
CHL1-208ENST00000453040 KRT222Q8N1A0 295 aa13.11□□□□□ -0.31
CHL1-208ENST00000453040 MYCBPQ99417 103 aaPredicted RBP13.11□□□□□ -0.31
CHL1-208ENST00000453040 USP25Q9UHP3 1055 aa13.11□□□□□ -0.31
CHL1-208ENST00000453040 ZRANB2O95218 330 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHL1-208ENST00000453040 INTS4Q96HW7 963 aaKnown RBP13.11□□□□□ -0.31
CHL1-208ENST00000453040 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
CHL1-208ENST00000453040 SART3Q15020 963 aaKnown RBP13.11□□□□□ -0.31
CHL1-208ENST00000453040 NEK11Q8NG66 645 aa13.11□□□□□ -0.31
CHL1-208ENST00000453040 CRB1P82279 1406 aa13.1□□□□□ -0.31
CHL1-208ENST00000453040 CACNA1FO60840 1977 aa13.1□□□□□ -0.31
CHL1-208ENST00000453040 BANK1Q8NDB2 785 aa13.1□□□□□ -0.31
CHL1-208ENST00000453040 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
CHL1-208ENST00000453040 ADCY5O95622 1261 aa13.1□□□□□ -0.31
CHL1-208ENST00000453040 FBLN1P23142 703 aa13.1□□□□□ -0.31
CHL1-208ENST00000453040 TSPYL1Q9H0U9 437 aa13.1□□□□□ -0.31
CHL1-208ENST00000453040 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
CHL1-208ENST00000453040 SEMA3FQ13275 785 aa13.09□□□□□ -0.31
CHL1-208ENST00000453040 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
CHL1-208ENST00000453040 CASQ1P31415 396 aa13.09□□□□□ -0.31
CHL1-208ENST00000453040 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
CHL1-208ENST00000453040 SSH2Q76I76 1423 aa13.08□□□□□ -0.31
CHL1-208ENST00000453040 PRKAR2BP31323 418 aa13.08□□□□□ -0.31
CHL1-208ENST00000453040 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
CHL1-208ENST00000453040 LMOD3Q0VAK6 560 aa13.08□□□□□ -0.32
CHL1-208ENST00000453040 FANCGO15287 622 aa13.07□□□□□ -0.32
CHL1-208ENST00000453040 PTMAP06454 111 aaKnown RBP13.07□□□□□ -0.32
CHL1-208ENST00000453040 SRLQ86TD4 932 aa13.07□□□□□ -0.32
CHL1-208ENST00000453040 MBD3O95983 291 aa13.07□□□□□ -0.32
CHL1-208ENST00000453040 SATB1Q01826 763 aa13.07□□□□□ -0.32
CHL1-208ENST00000453040 TTC14Q96N46 770 aa13.07□□□□□ -0.32
CHL1-208ENST00000453040 GTF2A1P52655 376 aaPredicted RBP13.06□□□□□ -0.32
CHL1-208ENST00000453040 NBPF20Q3BBV1 942 aa13.06□□□□□ -0.32
CHL1-208ENST00000453040 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms