RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 AMER1Q5JTC6 1135 aaPredicted RBP15.89■□□□□ 0.13
HERC3-207ENST00000452979 USPL1Q5W0Q7 1092 aa15.89■□□□□ 0.13
HERC3-207ENST00000452979 NARFQ9UHQ1 456 aa15.89■□□□□ 0.13
HERC3-207ENST00000452979 VSIG10Q8N0Z9 540 aa15.88■□□□□ 0.13
HERC3-207ENST00000452979 KCPQ6ZWJ8 1503 aa15.88■□□□□ 0.13
HERC3-207ENST00000452979 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
HERC3-207ENST00000452979 TNRC6CQ9HCJ0 1690 aaKnown RBP15.87■□□□□ 0.13
HERC3-207ENST00000452979 RNMTO43148 476 aaKnown RBP15.87■□□□□ 0.13
HERC3-207ENST00000452979 C16orf71Q8IYS4 520 aaPredicted RBP15.87■□□□□ 0.13
HERC3-207ENST00000452979 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
HERC3-207ENST00000452979 UBR2Q8IWV8 1755 aa15.86■□□□□ 0.13
HERC3-207ENST00000452979 NFIXQ14938 502 aa15.86■□□□□ 0.13
HERC3-207ENST00000452979 BCL2L12Q9HB09 334 aa15.86■□□□□ 0.13
HERC3-207ENST00000452979 RRAGCQ9HB90 399 aa15.86■□□□□ 0.13
HERC3-207ENST00000452979 ZC3H4Q9UPT8 1303 aaKnown RBP15.86■□□□□ 0.13
HERC3-207ENST00000452979 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
HERC3-207ENST00000452979 MTHFSDQ2M296 383 aaKnown RBP15.85■□□□□ 0.13
HERC3-207ENST00000452979 HMOX1P09601 288 aa15.84■□□□□ 0.13
HERC3-207ENST00000452979 ZBTB1Q9Y2K1 713 aa15.84■□□□□ 0.13
HERC3-207ENST00000452979 COL15A1P39059 1388 aa15.84■□□□□ 0.13
HERC3-207ENST00000452979 PER1O15534 1290 aaPredicted RBP15.83■□□□□ 0.12
HERC3-207ENST00000452979 SERPINB2P05120 415 aa15.83■□□□□ 0.12
HERC3-207ENST00000452979 JMYQ8N9B5 988 aa15.83■□□□□ 0.12
HERC3-207ENST00000452979 KLRG1Q96E93 195 aa15.83■□□□□ 0.12
HERC3-207ENST00000452979 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
HERC3-207ENST00000452979 DIAPH1O60610 1272 aaKnown RBP15.82■□□□□ 0.12
HERC3-207ENST00000452979 LMNB1P20700 586 aa15.81■□□□□ 0.12
HERC3-207ENST00000452979 PRELPP51888 382 aa15.81■□□□□ 0.12
HERC3-207ENST00000452979 EIF5P55010 431 aaKnown RBP15.81■□□□□ 0.12
HERC3-207ENST00000452979 TTLL6Q8N841 843 aa15.81■□□□□ 0.12
HERC3-207ENST00000452979 KIF7Q2M1P5 1343 aa15.8■□□□□ 0.12
HERC3-207ENST00000452979 STARD3NLO95772 234 aa15.8■□□□□ 0.12
HERC3-207ENST00000452979 HTRA3P83110 453 aa15.8■□□□□ 0.12
HERC3-207ENST00000452979 SMC1BQ8NDV3 1235 aa15.8■□□□□ 0.12
HERC3-207ENST00000452979 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
HERC3-207ENST00000452979 A0A087WZG4 1122 aa15.79■□□□□ 0.12
HERC3-207ENST00000452979 GLTPD2A6NH11 291 aa15.79■□□□□ 0.12
HERC3-207ENST00000452979 H0YIN7 160 aa15.79■□□□□ 0.12
HERC3-207ENST00000452979 CANXP27824 592 aaKnown RBP15.79■□□□□ 0.12
HERC3-207ENST00000452979 RASSF7Q02833 373 aa15.79■□□□□ 0.12
HERC3-207ENST00000452979 C2CD5Q86YS7 1000 aa15.79■□□□□ 0.12
HERC3-207ENST00000452979 ANKRD31Q8N7Z5 1873 aa15.78■□□□□ 0.12
HERC3-207ENST00000452979 VEGFAP15692 232 aaPredicted RBP15.78■□□□□ 0.12
HERC3-207ENST00000452979 TEX13AQ9BXU3 409 aaPredicted RBP15.78■□□□□ 0.12
HERC3-207ENST00000452979 PDZRN3Q9UPQ7 1066 aa15.78■□□□□ 0.12
HERC3-207ENST00000452979 TIAM2Q8IVF5 1701 aa15.77■□□□□ 0.12
HERC3-207ENST00000452979 CARMIL3Q8ND23 1372 aa15.77■□□□□ 0.12
HERC3-207ENST00000452979 TTC5Q8N0Z6 440 aa15.77■□□□□ 0.12
HERC3-207ENST00000452979 IL17REQ8NFR9 667 aa15.77■□□□□ 0.12
HERC3-207ENST00000452979 DICER1Q9UPY3 1922 aaKnown RBP15.76■□□□□ 0.11
HERC3-207ENST00000452979 NFKBIEO00221 500 aa15.76■□□□□ 0.11
HERC3-207ENST00000452979 ZNF790Q6PG37 636 aa15.76■□□□□ 0.11
HERC3-207ENST00000452979 ZNF496Q96IT1 587 aaPredicted RBP15.76■□□□□ 0.11
HERC3-207ENST00000452979 BRIP1Q9BX63 1249 aa15.76■□□□□ 0.11
HERC3-207ENST00000452979 COL3A1P02461 1466 aaPredicted RBP15.76■□□□□ 0.11
HERC3-207ENST00000452979 FER1L6Q2WGJ9 1857 aa15.76■□□□□ 0.11
HERC3-207ENST00000452979 HEG1Q9ULI3 1381 aa15.75■□□□□ 0.11
HERC3-207ENST00000452979 GNAT3A8MTJ3 354 aa15.75■□□□□ 0.11
HERC3-207ENST00000452979 IL6STP40189 918 aaPredicted RBP15.75■□□□□ 0.11
HERC3-207ENST00000452979 CC2D1BQ5T0F9 858 aaKnown RBP15.75■□□□□ 0.11
HERC3-207ENST00000452979 TBC1D9BQ66K14 1250 aa15.75■□□□□ 0.11
HERC3-207ENST00000452979 SCN7AQ01118 1682 aa15.75■□□□□ 0.11
HERC3-207ENST00000452979 NPC1L1Q9UHC9 1359 aa15.75■□□□□ 0.11
HERC3-207ENST00000452979 POTECB2RU33 542 aa15.74■□□□□ 0.11
HERC3-207ENST00000452979 PDE6BP35913 854 aa15.74■□□□□ 0.11
HERC3-207ENST00000452979 TEFQ10587 303 aa15.74■□□□□ 0.11
HERC3-207ENST00000452979 BICDL1Q6ZP65 573 aa15.74■□□□□ 0.11
HERC3-207ENST00000452979 GAS2L2Q8NHY3 880 aa15.74■□□□□ 0.11
HERC3-207ENST00000452979 COL13A1Q5TAT6 717 aaPredicted RBP15.73■□□□□ 0.11
HERC3-207ENST00000452979 PRR5LQ6MZQ0 368 aa15.73■□□□□ 0.11
HERC3-207ENST00000452979 PCNTO95613 3336 aa15.73■□□□□ 0.11
HERC3-207ENST00000452979 COL11A2P13942 1736 aaPredicted RBP15.73■□□□□ 0.11
HERC3-207ENST00000452979 DPY19L2Q6NUT2 758 aa15.72■□□□□ 0.11
HERC3-207ENST00000452979 TBC1D2BQ9UPU7 963 aa15.72■□□□□ 0.11
HERC3-207ENST00000452979 CEMIPQ8WUJ3 1361 aa15.72■□□□□ 0.11
HERC3-207ENST00000452979 C21orf2O43822 256 aa15.71■□□□□ 0.11
HERC3-207ENST00000452979 ZNF622Q969S3 477 aaKnown RBP eCLIP15.71■□□□□ 0.11
HERC3-207ENST00000452979 FMNL2Q96PY5 1086 aa15.71■□□□□ 0.11
HERC3-207ENST00000452979 LTBP3Q9NS15 1303 aa15.7■□□□□ 0.1
HERC3-207ENST00000452979 ARFGEF2Q9Y6D5 1785 aa15.7■□□□□ 0.1
HERC3-207ENST00000452979 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
HERC3-207ENST00000452979 A1BGP04217 495 aa15.7■□□□□ 0.1
HERC3-207ENST00000452979 SETDB2Q96T68 719 aa15.7■□□□□ 0.1
HERC3-207ENST00000452979 BCORQ6W2J9 1755 aa15.7■□□□□ 0.1
HERC3-207ENST00000452979 SLX4Q8IY92 1834 aa15.69■□□□□ 0.1
HERC3-207ENST00000452979 CAMTA2O94983 1202 aa15.69■□□□□ 0.1
HERC3-207ENST00000452979 ERFEQ4G0M1 354 aa15.69■□□□□ 0.1
HERC3-207ENST00000452979 STYK1Q6J9G0 422 aa15.69■□□□□ 0.1
HERC3-207ENST00000452979 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
HERC3-207ENST00000452979 SRGNP10124 158 aa15.68■□□□□ 0.1
HERC3-207ENST00000452979 CCDC24Q8N4L8 307 aa15.68■□□□□ 0.1
HERC3-207ENST00000452979 CNKSR1Q969H4 720 aa15.68■□□□□ 0.1
HERC3-207ENST00000452979 PHACTR3Q96KR7 559 aa15.68■□□□□ 0.1
HERC3-207ENST00000452979 CACNA1SQ13698 1873 aa15.67■□□□□ 0.1
HERC3-207ENST00000452979 KCNQ3O43525 872 aa15.67■□□□□ 0.1
HERC3-207ENST00000452979 CNBD1Q8NA66 436 aa15.67■□□□□ 0.1
HERC3-207ENST00000452979 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
HERC3-207ENST00000452979 ZNF330Q9Y3S2 320 aaPredicted RBP15.67■□□□□ 0.1
HERC3-207ENST00000452979 ST5P78524 1137 aa15.66■□□□□ 0.1
HERC3-207ENST00000452979 SOGA3Q5TF21 947 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms