RNA–Protein interactions for RNA: ENST00000452977.5

CTDSP1-205, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-205ENST00000452977 ATP10DQ9P241 1426 aa20.63■□□□□ 0.89
CTDSP1-205ENST00000452977 IL17REQ8NFR9 667 aa20.63■□□□□ 0.89
CTDSP1-205ENST00000452977 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
CTDSP1-205ENST00000452977 CEMIPQ8WUJ3 1361 aa20.62■□□□□ 0.89
CTDSP1-205ENST00000452977 HEG1Q9ULI3 1381 aa20.62■□□□□ 0.89
CTDSP1-205ENST00000452977 USPL1Q5W0Q7 1092 aa20.62■□□□□ 0.89
CTDSP1-205ENST00000452977 GPBP1L1Q9HC44 474 aaPredicted RBP20.62■□□□□ 0.89
CTDSP1-205ENST00000452977 WWC3Q9ULE0 1092 aa20.62■□□□□ 0.89
CTDSP1-205ENST00000452977 ZBTB1Q9Y2K1 713 aa20.62■□□□□ 0.89
CTDSP1-205ENST00000452977 ADCY9O60503 1353 aa20.61■□□□□ 0.89
CTDSP1-205ENST00000452977 A0A0G2JLW4 131 aa20.61■□□□□ 0.89
CTDSP1-205ENST00000452977 PIM2Q9P1W9 311 aa20.61■□□□□ 0.89
CTDSP1-205ENST00000452977 DPEP1P16444 411 aa20.6■□□□□ 0.89
CTDSP1-205ENST00000452977 ZNF496Q96IT1 587 aaPredicted RBP20.6■□□□□ 0.89
CTDSP1-205ENST00000452977 N4BP2Q86UW6 1770 aaPredicted RBP20.59■□□□□ 0.89
CTDSP1-205ENST00000452977 KIAA1551Q9HCM1 1747 aa20.59■□□□□ 0.89
CTDSP1-205ENST00000452977 BTBD11A6QL63 1104 aa20.59■□□□□ 0.89
CTDSP1-205ENST00000452977 POLRMTO00411 1230 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-205ENST00000452977 HTATSF1O43719 755 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-205ENST00000452977 TM4SF1P30408 202 aa20.59■□□□□ 0.89
CTDSP1-205ENST00000452977 DDR1Q08345 913 aa20.59■□□□□ 0.89
CTDSP1-205ENST00000452977 SIPA1L3O60292 1781 aaPredicted RBP20.59■□□□□ 0.89
CTDSP1-205ENST00000452977 CANXP27824 592 aaKnown RBP20.58■□□□□ 0.89
CTDSP1-205ENST00000452977 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.89
CTDSP1-205ENST00000452977 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.89
CTDSP1-205ENST00000452977 EIF5P55010 431 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-205ENST00000452977 DALRD3Q5D0E6 543 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-205ENST00000452977 SENP3-EIF4A1A0A087X0R7 540 aa20.56■□□□□ 0.88
CTDSP1-205ENST00000452977 IL6STP40189 918 aaPredicted RBP20.56■□□□□ 0.88
CTDSP1-205ENST00000452977 NFIXQ14938 502 aa20.55■□□□□ 0.88
CTDSP1-205ENST00000452977 ARHGAP27Q6ZUM4 889 aa20.55■□□□□ 0.88
CTDSP1-205ENST00000452977 BRCA1P38398 1863 aaKnown RBP20.55■□□□□ 0.88
CTDSP1-205ENST00000452977 ARFGEF1Q9Y6D6 1849 aa20.53■□□□□ 0.88
CTDSP1-205ENST00000452977 PDZRN3Q9UPQ7 1066 aa20.53■□□□□ 0.88
CTDSP1-205ENST00000452977 SERPINB2P05120 415 aa20.52■□□□□ 0.88
CTDSP1-205ENST00000452977 KCNA3P22001 575 aa20.52■□□□□ 0.88
CTDSP1-205ENST00000452977 ZNF330Q9Y3S2 320 aaPredicted RBP20.52■□□□□ 0.88
CTDSP1-205ENST00000452977 SNRPA1P09661 255 aaKnown RBP20.51■□□□□ 0.87
CTDSP1-205ENST00000452977 ZNF526Q8TF50 670 aaPredicted RBP20.51■□□□□ 0.87
CTDSP1-205ENST00000452977 NRXN2Q9P2S2 1712 aa20.5■□□□□ 0.87
CTDSP1-205ENST00000452977 MCM10Q7L590 875 aa20.5■□□□□ 0.87
CTDSP1-205ENST00000452977 PNISRQ8TF01 805 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-205ENST00000452977 BCL2L12Q9HB09 334 aa20.5■□□□□ 0.87
CTDSP1-205ENST00000452977 CARMIL3Q8ND23 1372 aa20.49■□□□□ 0.87
CTDSP1-205ENST00000452977 SCN7AQ01118 1682 aa20.49■□□□□ 0.87
CTDSP1-205ENST00000452977 RALBP1Q15311 655 aa20.49■□□□□ 0.87
CTDSP1-205ENST00000452977 TAF7Q15545 349 aaPredicted RBP20.49■□□□□ 0.87
CTDSP1-205ENST00000452977 MAPK8IP3Q9UPT6 1336 aa20.49■□□□□ 0.87
CTDSP1-205ENST00000452977 H0YIN7 160 aa20.48■□□□□ 0.87
CTDSP1-205ENST00000452977 CHRNA5P30532 468 aa20.48■□□□□ 0.87
CTDSP1-205ENST00000452977 ZNF652Q9Y2D9 606 aa20.48■□□□□ 0.87
CTDSP1-205ENST00000452977 AFDNP55196 1824 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-205ENST00000452977 NPHP1O15259 732 aa20.47■□□□□ 0.87
CTDSP1-205ENST00000452977 A1BGP04217 495 aa20.47■□□□□ 0.87
CTDSP1-205ENST00000452977 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
CTDSP1-205ENST00000452977 SETDB2Q96T68 719 aa20.47■□□□□ 0.87
CTDSP1-205ENST00000452977 TBC1D2BQ9UPU7 963 aa20.47■□□□□ 0.87
CTDSP1-205ENST00000452977 RGL2O15211 777 aa20.46■□□□□ 0.87
CTDSP1-205ENST00000452977 PDE6BP35913 854 aa20.46■□□□□ 0.87
CTDSP1-205ENST00000452977 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
CTDSP1-205ENST00000452977 KCNQ3O43525 872 aa20.45■□□□□ 0.86
CTDSP1-205ENST00000452977 C9orf131Q5VYM1 1079 aa20.45■□□□□ 0.86
CTDSP1-205ENST00000452977 TBC1D9BQ66K14 1250 aa20.45■□□□□ 0.86
CTDSP1-205ENST00000452977 CLEC4GQ6UXB4 293 aa20.45■□□□□ 0.86
CTDSP1-205ENST00000452977 C2CD5Q86YS7 1000 aa20.45■□□□□ 0.86
CTDSP1-205ENST00000452977 TTLL6Q8N841 843 aa20.45■□□□□ 0.86
CTDSP1-205ENST00000452977 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
CTDSP1-205ENST00000452977 DCTN1Q14203 1278 aa20.44■□□□□ 0.86
CTDSP1-205ENST00000452977 NFE2L2Q16236 605 aa20.44■□□□□ 0.86
CTDSP1-205ENST00000452977 USP16Q9Y5T5 823 aa20.44■□□□□ 0.86
CTDSP1-205ENST00000452977 ZC3H4Q9UPT8 1303 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-205ENST00000452977 CAMTA2O94983 1202 aa20.43■□□□□ 0.86
CTDSP1-205ENST00000452977 ST5P78524 1137 aa20.43■□□□□ 0.86
CTDSP1-205ENST00000452977 CNBD1Q8NA66 436 aa20.43■□□□□ 0.86
CTDSP1-205ENST00000452977 KDM2BQ8NHM5 1336 aa20.43■□□□□ 0.86
CTDSP1-205ENST00000452977 DLEC1Q9Y238 1755 aa20.43■□□□□ 0.86
CTDSP1-205ENST00000452977 RNF181Q9P0P0 153 aa20.42■□□□□ 0.86
CTDSP1-205ENST00000452977 PLEKHF1Q96S99 279 aa20.41■□□□□ 0.86
CTDSP1-205ENST00000452977 KIF3CO14782 793 aa20.4■□□□□ 0.86
CTDSP1-205ENST00000452977 PRR5LQ6MZQ0 368 aa20.4■□□□□ 0.86
CTDSP1-205ENST00000452977 BCORQ6W2J9 1755 aa20.4■□□□□ 0.86
CTDSP1-205ENST00000452977 TOMM70O94826 608 aa20.39■□□□□ 0.85
CTDSP1-205ENST00000452977 HSPA6P17066 643 aa20.39■□□□□ 0.85
CTDSP1-205ENST00000452977 LMOD3Q0VAK6 560 aa20.39■□□□□ 0.85
CTDSP1-205ENST00000452977 C16orf71Q8IYS4 520 aaPredicted RBP20.39■□□□□ 0.85
CTDSP1-205ENST00000452977 LMNB1P20700 586 aa20.38■□□□□ 0.85
CTDSP1-205ENST00000452977 CNKSR1Q969H4 720 aa20.38■□□□□ 0.85
CTDSP1-205ENST00000452977 ZNF622Q969S3 477 aaKnown RBP eCLIP20.38■□□□□ 0.85
CTDSP1-205ENST00000452977 DLG5Q8TDM6 1919 aa20.37■□□□□ 0.85
CTDSP1-205ENST00000452977 LAMB4A4D0S4 1761 aa20.37■□□□□ 0.85
CTDSP1-205ENST00000452977 MYBBP1AQ9BQG0 1328 aaKnown RBP20.37■□□□□ 0.85
CTDSP1-205ENST00000452977 SOGA3Q5TF21 947 aa20.37■□□□□ 0.85
CTDSP1-205ENST00000452977 NBPF5PQ86XG9 351 aaPredicted RBP20.37■□□□□ 0.85
CTDSP1-205ENST00000452977 PRAMEF22A3QJZ6 481 aa20.36■□□□□ 0.85
CTDSP1-205ENST00000452977 TPTE2Q6XPS3 522 aa20.36■□□□□ 0.85
CTDSP1-205ENST00000452977 DDX10Q13206 875 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-205ENST00000452977 STYK1Q6J9G0 422 aa20.35■□□□□ 0.85
CTDSP1-205ENST00000452977 BABAM1Q9NWV8 329 aa20.35■□□□□ 0.85
CTDSP1-205ENST00000452977 KDM3BQ7LBC6 1761 aa20.35■□□□□ 0.85
CTDSP1-205ENST00000452977 PIP4K2AP48426 406 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms