RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 GSDMDP57764 484 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 TUBB4BP68371 445 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 FBLN2P98095 1184 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 MAP3K11Q16584 847 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 MMS22LQ6ZRQ5 1243 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 MSL3Q8N5Y2 521 aaKnown RBP9.89□□□□□ -0.83
SMCO1-202ENST00000452776 GPATCH11Q8N954 259 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 UBXN4Q92575 508 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 PBRM1Q86U86 1689 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 PIK3R4Q99570 1358 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 ZSCAN22P10073 491 aaPredicted RBP9.89□□□□□ -0.83
SMCO1-202ENST00000452776 MAP2K2P36507 400 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 EXOSC9Q06265 439 aaKnown RBP9.89□□□□□ -0.83
SMCO1-202ENST00000452776 RGL3Q3MIN7 710 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 MORC1Q86VD1 984 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 EGFL6Q8IUX8 553 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 EFCAB13Q8IY85 973 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 ANKRD20A12PQ8NF67 263 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 TDRD7Q8NHU6 1098 aaKnown RBP9.89□□□□□ -0.83
SMCO1-202ENST00000452776 DCTPP1Q9H773 170 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 CLIP2Q9UDT6 1046 aa9.89□□□□□ -0.83
SMCO1-202ENST00000452776 RNF17Q9BXT8 1623 aaKnown RBP9.88□□□□□ -0.83
SMCO1-202ENST00000452776 C9orf84Q5VXU9 1444 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 PPIP5K1Q6PFW1 1433 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 MED14O60244 1454 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 RPAP1Q9BWH6 1393 aaPredicted RBP9.88□□□□□ -0.83
SMCO1-202ENST00000452776 POTEMA6NI47 508 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 SRPK2P78362 688 aaKnown RBP9.88□□□□□ -0.83
SMCO1-202ENST00000452776 NAA30Q147X3 362 aaPredicted RBP9.88□□□□□ -0.83
SMCO1-202ENST00000452776 CT47A1Q5JQC4 288 aaPredicted RBP9.88□□□□□ -0.83
SMCO1-202ENST00000452776 CCDC158Q5M9N0 1113 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 SARM1Q6SZW1 724 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 LRRC8AQ8IWT6 810 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 GTF3C6Q969F1 213 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 MRFAP1L1Q96HT8 127 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 KCNG1Q9UIX4 513 aa9.88□□□□□ -0.83
SMCO1-202ENST00000452776 GPATCH8Q9UKJ3 1502 aaKnown RBP9.88□□□□□ -0.83
SMCO1-202ENST00000452776 PPP1R12AO14974 1030 aaPredicted RBP9.87□□□□□ -0.83
SMCO1-202ENST00000452776 GSPT1P15170 499 aaKnown RBP9.87□□□□□ -0.83
SMCO1-202ENST00000452776 NEK11Q8NG66 645 aa9.87□□□□□ -0.83
SMCO1-202ENST00000452776 DRC1Q96MC2 740 aa9.87□□□□□ -0.83
SMCO1-202ENST00000452776 PSDA5PKW4 1024 aaPredicted RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 EFCAB8A8MWE9 144 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 TRIM66O15016 1216 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 AP5Z1O43299 807 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 SETQ01105 290 aaPredicted RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 SMC1AQ14683 1233 aaKnown RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 CCDC93Q567U6 631 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 SMARCE1Q969G3 411 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 ZBTB9Q96C00 473 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 IMPACTQ9P2X3 320 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 SUFUQ9UMX1 484 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 CLEC11AQ9Y240 323 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 RAD54L2Q9Y4B4 1467 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 AK9Q5TCS8 1911 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 A0A087WUV0 522 aaPredicted RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 POLR3GO15318 223 aaPredicted RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 SKILP12757 684 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 CORO7P57737 925 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 ARHGAP29Q52LW3 1261 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 FOXD4L5Q5VV16 416 aaPredicted RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 GIMAP6Q6P9H5 292 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 SSH2Q76I76 1423 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 CCAR2Q8N163 923 aaKnown RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 STAG1Q8WVM7 1258 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 FOXD4L4Q8WXT5 416 aaPredicted RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 CHMP4CQ96CF2 233 aa9.86□□□□□ -0.83
SMCO1-202ENST00000452776 DDX19AQ9NUU7 478 aaKnown RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 RRP7AQ9Y3A4 280 aaKnown RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 SPAG9O60271 1321 aaKnown RBP9.86□□□□□ -0.83
SMCO1-202ENST00000452776 RGS12O14924 1447 aa9.85□□□□□ -0.83
SMCO1-202ENST00000452776 ERCC3P19447 782 aa9.85□□□□□ -0.83
SMCO1-202ENST00000452776 CASTP20810 708 aaKnown RBP9.85□□□□□ -0.83
SMCO1-202ENST00000452776 SSR1P43307 286 aaKnown RBP9.85□□□□□ -0.83
SMCO1-202ENST00000452776 TYRO3Q06418 890 aa9.85□□□□□ -0.83
SMCO1-202ENST00000452776 ERC1Q8IUD2 1116 aa9.85□□□□□ -0.83
SMCO1-202ENST00000452776 RPAP2Q8IXW5 612 aaPredicted RBP9.85□□□□□ -0.83
SMCO1-202ENST00000452776 GPR161Q8N6U8 529 aaKnown RBP9.85□□□□□ -0.83
SMCO1-202ENST00000452776 CACTINQ8WUQ7 758 aaKnown RBP9.85□□□□□ -0.83
SMCO1-202ENST00000452776 API5Q9BZZ5 524 aaKnown RBP9.85□□□□□ -0.83
SMCO1-202ENST00000452776 SRCIN1Q9C0H9 1055 aa9.85□□□□□ -0.83
SMCO1-202ENST00000452776 NUP62CLQ9H1M0 184 aa9.85□□□□□ -0.83
SMCO1-202ENST00000452776 BSDC1Q9NW68 430 aaPredicted RBP9.85□□□□□ -0.83
SMCO1-202ENST00000452776 GOLGA6L19H0YKK7 550 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 OAS2P29728 719 aaKnown RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 EIF5P55010 431 aaKnown RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 SNW1Q13573 536 aaKnown RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 DNAAF4Q8WXU2 420 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 OSBPL3Q9H4L5 887 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 ARFGAP3Q9NP61 516 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 ST7Q9NRC1 585 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 ORC3Q9UBD5 711 aaPredicted RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 ADAM21Q9UKJ8 722 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 KDM5AP29375 1690 aaKnown RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 EIF3CLB5ME19 914 aaKnown RBP9.84□□□□□ -0.83
SMCO1-202ENST00000452776 SGSM2O43147 1006 aa9.84□□□□□ -0.83
SMCO1-202ENST00000452776 STX6O43752 255 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms