RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ZNF790Q6PG37 636 aa28.76■■■□□ 2.19
C9orf3-208ENST00000451893 BCS1LQ9Y276 419 aa28.76■■■□□ 2.19
C9orf3-208ENST00000451893 ZBTB1Q9Y2K1 713 aa28.76■■■□□ 2.19
C9orf3-208ENST00000451893 ZNF330Q9Y3S2 320 aaPredicted RBP28.76■■■□□ 2.19
C9orf3-208ENST00000451893 A0A0G2JLW4 131 aa28.75■■■□□ 2.19
C9orf3-208ENST00000451893 BTBD11A6QL63 1104 aa28.75■■■□□ 2.19
C9orf3-208ENST00000451893 GIGYF1O75420 1035 aaPredicted RBP28.75■■■□□ 2.19
C9orf3-208ENST00000451893 TEX13AQ9BXU3 409 aaPredicted RBP28.75■■■□□ 2.19
C9orf3-208ENST00000451893 PXDNLA1KZ92 1463 aa28.74■■■□□ 2.19
C9orf3-208ENST00000451893 FMNL2Q96PY5 1086 aa28.74■■■□□ 2.19
C9orf3-208ENST00000451893 SIPA1L3O60292 1781 aaPredicted RBP28.74■■■□□ 2.19
C9orf3-208ENST00000451893 GOLGB1Q14789 3259 aaKnown RBP28.73■■■□□ 2.19
C9orf3-208ENST00000451893 ZNF496Q96IT1 587 aaPredicted RBP28.72■■■□□ 2.19
C9orf3-208ENST00000451893 HEG1Q9ULI3 1381 aa28.72■■■□□ 2.19
C9orf3-208ENST00000451893 A0A087WZG4 1122 aa28.71■■■□□ 2.19
C9orf3-208ENST00000451893 NARFQ9UHQ1 456 aa28.71■■■□□ 2.19
C9orf3-208ENST00000451893 DPEP1P16444 411 aa28.7■■■□□ 2.18
C9orf3-208ENST00000451893 CEMIPQ8WUJ3 1361 aa28.68■■■□□ 2.18
C9orf3-208ENST00000451893 DDR1Q08345 913 aa28.68■■■□□ 2.18
C9orf3-208ENST00000451893 MCM10Q7L590 875 aa28.68■■■□□ 2.18
C9orf3-208ENST00000451893 ATP10DQ9P241 1426 aa28.68■■■□□ 2.18
C9orf3-208ENST00000451893 KIAA1551Q9HCM1 1747 aa28.66■■■□□ 2.18
C9orf3-208ENST00000451893 POLRMTO00411 1230 aaKnown RBP28.66■■■□□ 2.18
C9orf3-208ENST00000451893 ARHGAP27Q6ZUM4 889 aa28.66■■■□□ 2.18
C9orf3-208ENST00000451893 ZNF526Q8TF50 670 aaPredicted RBP28.66■■■□□ 2.18
C9orf3-208ENST00000451893 PNNQ9H307 717 aaKnown RBP28.66■■■□□ 2.18
C9orf3-208ENST00000451893 GPBP1L1Q9HC44 474 aaPredicted RBP28.66■■■□□ 2.18
C9orf3-208ENST00000451893 PIM2Q9P1W9 311 aa28.66■■■□□ 2.18
C9orf3-208ENST00000451893 MAPK8IP3Q9UPT6 1336 aa28.65■■■□□ 2.18
C9orf3-208ENST00000451893 C1QTNF8P60827 252 aa28.64■■■□□ 2.18
C9orf3-208ENST00000451893 BICDL1Q6ZP65 573 aa28.64■■■□□ 2.18
C9orf3-208ENST00000451893 NPHP1O15259 732 aa28.63■■■□□ 2.17
C9orf3-208ENST00000451893 HTATSF1O43719 755 aaKnown RBP28.63■■■□□ 2.17
C9orf3-208ENST00000451893 TM4SF1P30408 202 aa28.63■■■□□ 2.17
C9orf3-208ENST00000451893 DDX10Q13206 875 aaKnown RBP28.63■■■□□ 2.17
C9orf3-208ENST00000451893 DCTN1Q14203 1278 aa28.63■■■□□ 2.17
C9orf3-208ENST00000451893 NFIXQ14938 502 aa28.63■■■□□ 2.17
C9orf3-208ENST00000451893 DALRD3Q5D0E6 543 aaKnown RBP28.62■■■□□ 2.17
C9orf3-208ENST00000451893 AFDNP55196 1824 aaKnown RBP28.62■■■□□ 2.17
C9orf3-208ENST00000451893 BRCA1P38398 1863 aaKnown RBP28.61■■■□□ 2.17
C9orf3-208ENST00000451893 KCNQ3O43525 872 aa28.61■■■□□ 2.17
C9orf3-208ENST00000451893 EIF5P55010 431 aaKnown RBP28.61■■■□□ 2.17
C9orf3-208ENST00000451893 SENP3-EIF4A1A0A087X0R7 540 aa28.6■■■□□ 2.17
C9orf3-208ENST00000451893 SERPINB2P05120 415 aa28.6■■■□□ 2.17
C9orf3-208ENST00000451893 IL6STP40189 918 aaPredicted RBP28.6■■■□□ 2.17
C9orf3-208ENST00000451893 RALBP1Q15311 655 aa28.59■■■□□ 2.17
C9orf3-208ENST00000451893 TBC1D2BQ9UPU7 963 aa28.59■■■□□ 2.17
C9orf3-208ENST00000451893 DLG5Q8TDM6 1919 aa28.59■■■□□ 2.17
C9orf3-208ENST00000451893 ARFGEF1Q9Y6D6 1849 aa28.58■■■□□ 2.17
C9orf3-208ENST00000451893 A1BGP04217 495 aa28.58■■■□□ 2.17
C9orf3-208ENST00000451893 SNRPA1P09661 255 aaKnown RBP28.58■■■□□ 2.17
C9orf3-208ENST00000451893 CHRNA5P30532 468 aa28.58■■■□□ 2.17
C9orf3-208ENST00000451893 TAF7Q15545 349 aaPredicted RBP28.56■■■□□ 2.16
C9orf3-208ENST00000451893 BCL2L12Q9HB09 334 aa28.56■■■□□ 2.16
C9orf3-208ENST00000451893 SCN7AQ01118 1682 aa28.55■■■□□ 2.16
C9orf3-208ENST00000451893 ADCY9O60503 1353 aa28.55■■■□□ 2.16
C9orf3-208ENST00000451893 DZIP3Q86Y13 1208 aaKnown RBP28.54■■■□□ 2.16
C9orf3-208ENST00000451893 PNISRQ8TF01 805 aaKnown RBP28.54■■■□□ 2.16
C9orf3-208ENST00000451893 KCNA3P22001 575 aa28.53■■■□□ 2.16
C9orf3-208ENST00000451893 TBC1D9BQ66K14 1250 aa28.53■■■□□ 2.16
C9orf3-208ENST00000451893 USP16Q9Y5T5 823 aa28.53■■■□□ 2.16
C9orf3-208ENST00000451893 PIP4K2AP48426 406 aaPredicted RBP28.52■■■□□ 2.16
C9orf3-208ENST00000451893 NFE2L2Q16236 605 aa28.52■■■□□ 2.16
C9orf3-208ENST00000451893 NRXN2Q9P2S2 1712 aa28.52■■■□□ 2.16
C9orf3-208ENST00000451893 CARMIL3Q8ND23 1372 aa28.51■■■□□ 2.16
C9orf3-208ENST00000451893 SETDB2Q96T68 719 aa28.51■■■□□ 2.15
C9orf3-208ENST00000451893 H0YIN7 160 aa28.5■■■□□ 2.15
C9orf3-208ENST00000451893 C2CD5Q86YS7 1000 aa28.5■■■□□ 2.15
C9orf3-208ENST00000451893 MIS18AQ9NYP9 233 aa28.5■■■□□ 2.15
C9orf3-208ENST00000451893 ZNF652Q9Y2D9 606 aa28.5■■■□□ 2.15
C9orf3-208ENST00000451893 PRAMEF22A3QJZ6 481 aa28.49■■■□□ 2.15
C9orf3-208ENST00000451893 PLEKHF1Q96S99 279 aa28.48■■■□□ 2.15
C9orf3-208ENST00000451893 MYBBP1AQ9BQG0 1328 aaKnown RBP28.47■■■□□ 2.15
C9orf3-208ENST00000451893 ST5P78524 1137 aa28.47■■■□□ 2.15
C9orf3-208ENST00000451893 C9orf131Q5VYM1 1079 aa28.47■■■□□ 2.15
C9orf3-208ENST00000451893 BCORQ6W2J9 1755 aa28.47■■■□□ 2.15
C9orf3-208ENST00000451893 PDE6BP35913 854 aa28.46■■■□□ 2.15
C9orf3-208ENST00000451893 TTLL6Q8N841 843 aa28.46■■■□□ 2.15
C9orf3-208ENST00000451893 CNBD1Q8NA66 436 aa28.46■■■□□ 2.15
C9orf3-208ENST00000451893 LAMB4A4D0S4 1761 aa28.46■■■□□ 2.15
C9orf3-208ENST00000451893 DLEC1Q9Y238 1755 aa28.45■■■□□ 2.15
C9orf3-208ENST00000451893 CAMTA2O94983 1202 aa28.45■■■□□ 2.14
C9orf3-208ENST00000451893 ZNF622Q969S3 477 aaKnown RBP eCLIP28.45■■■□□ 2.14
C9orf3-208ENST00000451893 RNF181Q9P0P0 153 aa28.45■■■□□ 2.14
C9orf3-208ENST00000451893 WDR43Q15061 677 aaKnown RBP eCLIP28.44■■■□□ 2.14
C9orf3-208ENST00000451893 MIER1Q8N108 512 aa28.44■■■□□ 2.14
C9orf3-208ENST00000451893 THUMPD2Q9BTF0 503 aaKnown RBP28.44■■■□□ 2.14
C9orf3-208ENST00000451893 PDZRN3Q9UPQ7 1066 aa28.44■■■□□ 2.14
C9orf3-208ENST00000451893 KDM3BQ7LBC6 1761 aa28.43■■■□□ 2.14
C9orf3-208ENST00000451893 CCDC24Q8N4L8 307 aa28.43■■■□□ 2.14
C9orf3-208ENST00000451893 LMOD3Q0VAK6 560 aa28.42■■■□□ 2.14
C9orf3-208ENST00000451893 PRR5LQ6MZQ0 368 aa28.42■■■□□ 2.14
C9orf3-208ENST00000451893 RIPK4P57078 832 aa28.41■■■□□ 2.14
C9orf3-208ENST00000451893 NBPF5PQ86XG9 351 aaPredicted RBP28.41■■■□□ 2.14
C9orf3-208ENST00000451893 NGEFQ8N5V2 710 aa28.41■■■□□ 2.14
C9orf3-208ENST00000451893 BRIP1Q9BX63 1249 aa28.41■■■□□ 2.14
C9orf3-208ENST00000451893 ANP32CO43423 234 aa28.4■■■□□ 2.14
C9orf3-208ENST00000451893 CLEC4GQ6UXB4 293 aa28.4■■■□□ 2.14
C9orf3-208ENST00000451893 ANKRD31Q8N7Z5 1873 aa28.39■■■□□ 2.14
C9orf3-208ENST00000451893 TSPYL4Q9UJ04 414 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms