RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 DDIT3P35638 169 aa14.82□□□□□ -0.04
COL27A1-202ENST00000451716 SLC39A6Q13433 755 aa14.82□□□□□ -0.04
COL27A1-202ENST00000451716 BEND3Q5T5X7 828 aa14.82□□□□□ -0.04
COL27A1-202ENST00000451716 NUTM1Q86Y26 1132 aa14.82□□□□□ -0.04
COL27A1-202ENST00000451716 RILPL2Q969X0 211 aa14.82□□□□□ -0.04
COL27A1-202ENST00000451716 GZF1Q9H116 711 aaPredicted RBP14.82□□□□□ -0.04
COL27A1-202ENST00000451716 OSBPL3Q9H4L5 887 aa14.82□□□□□ -0.04
COL27A1-202ENST00000451716 MED1Q15648 1581 aaPredicted RBP14.82□□□□□ -0.04
COL27A1-202ENST00000451716 SRGAP3O43295 1099 aa14.82□□□□□ -0.04
COL27A1-202ENST00000451716 GIGYF1O75420 1035 aaPredicted RBP14.82□□□□□ -0.04
COL27A1-202ENST00000451716 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
COL27A1-202ENST00000451716 NCOA3Q9Y6Q9 1424 aa14.82□□□□□ -0.04
COL27A1-202ENST00000451716 SALL3Q9BXA9 1300 aa14.81□□□□□ -0.04
COL27A1-202ENST00000451716 TRIM6-TRIM34B2RNG4 842 aa14.81□□□□□ -0.04
COL27A1-202ENST00000451716 RGPD5Q99666 1765 aa14.81□□□□□ -0.04
COL27A1-202ENST00000451716 IPO4Q8TEX9 1081 aaKnown RBP14.81□□□□□ -0.04
COL27A1-202ENST00000451716 ADCY9O60503 1353 aa14.8□□□□□ -0.04
COL27A1-202ENST00000451716 HOXB7P09629 217 aa14.8□□□□□ -0.04
COL27A1-202ENST00000451716 UNC5CLQ8IV45 518 aa14.8□□□□□ -0.04
COL27A1-202ENST00000451716 SSH3Q8TE77 659 aa14.8□□□□□ -0.04
COL27A1-202ENST00000451716 TRPM3Q9HCF6 1732 aaPredicted RBP14.8□□□□□ -0.04
COL27A1-202ENST00000451716 AIMP1Q12904 312 aaKnown RBP14.8□□□□□ -0.04
COL27A1-202ENST00000451716 DBF4Q9UBU7 674 aaPredicted RBP14.8□□□□□ -0.04
COL27A1-202ENST00000451716 MAP3K2Q9Y2U5 619 aa14.8□□□□□ -0.04
COL27A1-202ENST00000451716 PHRF1Q9P1Y6 1649 aaKnown RBP14.8□□□□□ -0.04
COL27A1-202ENST00000451716 ERC2O15083 957 aa14.79□□□□□ -0.04
COL27A1-202ENST00000451716 MAP4K4O95819 1239 aaPredicted RBP14.79□□□□□ -0.04
COL27A1-202ENST00000451716 CSB-PGBD3P0DP91 1061 aa14.79□□□□□ -0.04
COL27A1-202ENST00000451716 RAPGEF4Q8WZA2 1011 aa14.79□□□□□ -0.04
COL27A1-202ENST00000451716 TNPO1Q92973 898 aaKnown RBP14.79□□□□□ -0.04
COL27A1-202ENST00000451716 KDM3BQ7LBC6 1761 aa14.79□□□□□ -0.04
COL27A1-202ENST00000451716 LMO7Q8WWI1 1683 aa14.79□□□□□ -0.04
COL27A1-202ENST00000451716 CWF19L2Q2TBE0 894 aaKnown RBP14.79□□□□□ -0.04
COL27A1-202ENST00000451716 PXDNLA1KZ92 1463 aa14.79□□□□□ -0.04
COL27A1-202ENST00000451716 RABEP1Q15276 862 aa14.78□□□□□ -0.04
COL27A1-202ENST00000451716 SAMD1Q6SPF0 538 aaPredicted RBP14.78□□□□□ -0.04
COL27A1-202ENST00000451716 MST1RQ04912 1400 aa14.78□□□□□ -0.04
COL27A1-202ENST00000451716 NCAPD2Q15021 1401 aa14.78□□□□□ -0.04
COL27A1-202ENST00000451716 REC8O95072 547 aa14.78□□□□□ -0.04
COL27A1-202ENST00000451716 NFATC2IPQ8NCF5 419 aa14.77□□□□□ -0.04
COL27A1-202ENST00000451716 POLA2Q14181 598 aa14.77□□□□□ -0.05
COL27A1-202ENST00000451716 RHPN1Q8TCX5 695 aa14.77□□□□□ -0.05
COL27A1-202ENST00000451716 C9orf78Q9NZ63 289 aaPredicted RBP14.76□□□□□ -0.05
COL27A1-202ENST00000451716 TRAK2O60296 914 aa14.76□□□□□ -0.05
COL27A1-202ENST00000451716 PIP4K2AP48426 406 aaPredicted RBP14.76□□□□□ -0.05
COL27A1-202ENST00000451716 MYL6BP14649 208 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 ESYT1Q9BSJ8 1104 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 CHMLP26374 656 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 IL25Q9H293 177 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 TATP17735 454 aaPredicted RBP14.75□□□□□ -0.05
COL27A1-202ENST00000451716 SSFA2P28290 1259 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 RAB3GAP1Q15042 981 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 ZNF790Q6PG37 636 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 KSR2Q6VAB6 950 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 HOMEZQ8IX15 550 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 ANO2Q9NQ90 1003 aa14.75□□□□□ -0.05
COL27A1-202ENST00000451716 PA2G4Q9UQ80 394 aaKnown RBP14.75□□□□□ -0.05
COL27A1-202ENST00000451716 NPHP3Q7Z494 1330 aa14.74□□□□□ -0.05
COL27A1-202ENST00000451716 STRCP1A6NGW2 1772 aa14.74□□□□□ -0.05
COL27A1-202ENST00000451716 HEG1Q9ULI3 1381 aa14.74□□□□□ -0.05
COL27A1-202ENST00000451716 PHKG2P15735 406 aa14.74□□□□□ -0.05
COL27A1-202ENST00000451716 OS9Q13438 667 aaPredicted RBP14.74□□□□□ -0.05
COL27A1-202ENST00000451716 ZFP91Q96JP5 570 aaPredicted RBP14.74□□□□□ -0.05
COL27A1-202ENST00000451716 SLC52A2Q9HAB3 445 aa14.74□□□□□ -0.05
COL27A1-202ENST00000451716 PALD1Q9ULE6 856 aa14.74□□□□□ -0.05
COL27A1-202ENST00000451716 MEGF6O75095 1541 aa14.73□□□□□ -0.05
COL27A1-202ENST00000451716 PDIA6Q15084 440 aa14.73□□□□□ -0.05
COL27A1-202ENST00000451716 CIZ1Q9ULV3 898 aaPredicted RBP14.73□□□□□ -0.05
COL27A1-202ENST00000451716 KIF1AQ12756 1690 aa14.73□□□□□ -0.05
COL27A1-202ENST00000451716 KDM6AO15550 1401 aaPredicted RBP14.73□□□□□ -0.05
COL27A1-202ENST00000451716 ALS2Q96Q42 1657 aa14.73□□□□□ -0.05
COL27A1-202ENST00000451716 CADPS2Q86UW7 1296 aa14.73□□□□□ -0.05
COL27A1-202ENST00000451716 AK9Q5TCS8 1911 aa14.73□□□□□ -0.05
COL27A1-202ENST00000451716 N4BP2Q86UW6 1770 aaPredicted RBP14.73□□□□□ -0.05
COL27A1-202ENST00000451716 RAB11FIP3O75154 756 aa14.72□□□□□ -0.05
COL27A1-202ENST00000451716 KIF1BPQ96EK5 621 aa14.72□□□□□ -0.05
COL27A1-202ENST00000451716 ZNF496Q96IT1 587 aaPredicted RBP14.72□□□□□ -0.05
COL27A1-202ENST00000451716 CYP27B1O15528 508 aa14.72□□□□□ -0.05
COL27A1-202ENST00000451716 PKP1Q13835 747 aa14.72□□□□□ -0.05
COL27A1-202ENST00000451716 ZGPATQ8N5A5 531 aaKnown RBP14.72□□□□□ -0.05
COL27A1-202ENST00000451716 DNAJC5Q9H3Z4 198 aa14.72□□□□□ -0.05
COL27A1-202ENST00000451716 DDX21Q9NR30 783 aaKnown RBP eCLIP14.72□□□□□ -0.05
COL27A1-202ENST00000451716 HYPKQ9NX55 129 aa14.72□□□□□ -0.05
COL27A1-202ENST00000451716 ST18O60284 1047 aa14.71□□□□□ -0.05
COL27A1-202ENST00000451716 NEK4P51957 841 aa14.71□□□□□ -0.05
COL27A1-202ENST00000451716 NOL8Q76FK4 1167 aaKnown RBP14.71□□□□□ -0.05
COL27A1-202ENST00000451716 PI4K2BQ8TCG2 481 aa14.71□□□□□ -0.05
COL27A1-202ENST00000451716 SPG7Q9UQ90 795 aa14.71□□□□□ -0.05
COL27A1-202ENST00000451716 RRAGDQ9NQL2 400 aaPredicted RBP14.71□□□□□ -0.05
COL27A1-202ENST00000451716 DDX11L8A8MPP1 907 aa14.71□□□□□ -0.06
COL27A1-202ENST00000451716 JARID2Q92833 1246 aaPredicted RBP14.71□□□□□ -0.06
COL27A1-202ENST00000451716 USP16Q9Y5T5 823 aa14.71□□□□□ -0.06
COL27A1-202ENST00000451716 OVOS2A0A0G2JMS6 1433 aa14.7□□□□□ -0.06
COL27A1-202ENST00000451716 RIC3Q7Z5B4 369 aa14.7□□□□□ -0.06
COL27A1-202ENST00000451716 IFNL2Q8IZJ0 200 aa14.7□□□□□ -0.06
COL27A1-202ENST00000451716 SUCLG2Q96I99 432 aa14.7□□□□□ -0.06
COL27A1-202ENST00000451716 CAMTA1Q9Y6Y1 1673 aa14.7□□□□□ -0.06
COL27A1-202ENST00000451716 KAZALD1Q96I82 304 aa14.7□□□□□ -0.06
COL27A1-202ENST00000451716 GBP4Q96PP9 640 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms