RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
NDUFA3-209ENST00000451517 PCDHB15Q9Y5E8 787 aa14.24□□□□□ -0.13
NDUFA3-209ENST00000451517 LAMB4A4D0S4 1761 aa14.24□□□□□ -0.13
NDUFA3-209ENST00000451517 PXDNLA1KZ92 1463 aa14.24□□□□□ -0.13
NDUFA3-209ENST00000451517 FKBP5Q13451 457 aaPredicted RBP14.23□□□□□ -0.13
NDUFA3-209ENST00000451517 PDIA6Q15084 440 aa14.23□□□□□ -0.13
NDUFA3-209ENST00000451517 CENPQQ7L2Z9 268 aaPredicted RBP14.23□□□□□ -0.13
NDUFA3-209ENST00000451517 PELP1Q8IZL8 1130 aaKnown RBP14.23□□□□□ -0.13
NDUFA3-209ENST00000451517 PHAXQ9H814 394 aaKnown RBP14.23□□□□□ -0.13
NDUFA3-209ENST00000451517 HYPKQ9NX55 129 aa14.23□□□□□ -0.13
NDUFA3-209ENST00000451517 DOT1LQ8TEK3 1739 aa14.23□□□□□ -0.13
NDUFA3-209ENST00000451517 ITGB4P16144 1822 aa14.22□□□□□ -0.13
NDUFA3-209ENST00000451517 F6X3S4 739 aa14.22□□□□□ -0.13
NDUFA3-209ENST00000451517 CCT4P50991 539 aaKnown RBP14.22□□□□□ -0.13
NDUFA3-209ENST00000451517 PROSER3Q2NL68 480 aa14.22□□□□□ -0.13
NDUFA3-209ENST00000451517 GJD4Q96KN9 370 aaPredicted RBP14.22□□□□□ -0.13
NDUFA3-209ENST00000451517 ATG3Q9NT62 314 aa14.22□□□□□ -0.13
NDUFA3-209ENST00000451517 TRPC5Q9UL62 973 aaPredicted RBP14.22□□□□□ -0.13
NDUFA3-209ENST00000451517 USP16Q9Y5T5 823 aa14.22□□□□□ -0.13
NDUFA3-209ENST00000451517 ERBB4Q15303 1308 aa14.21□□□□□ -0.13
NDUFA3-209ENST00000451517 ANXA1P04083 346 aa14.21□□□□□ -0.13
NDUFA3-209ENST00000451517 PRIM1P49642 420 aaKnown RBP14.21□□□□□ -0.13
NDUFA3-209ENST00000451517 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
NDUFA3-209ENST00000451517 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.13
NDUFA3-209ENST00000451517 N4BP2Q86UW6 1770 aaPredicted RBP14.21□□□□□ -0.13
NDUFA3-209ENST00000451517 ONECUT3O60422 494 aaPredicted RBP14.2□□□□□ -0.14
NDUFA3-209ENST00000451517 IGHDP01880 384 aa14.2□□□□□ -0.14
NDUFA3-209ENST00000451517 ATP10DQ9P241 1426 aa14.19□□□□□ -0.14
NDUFA3-209ENST00000451517 PTCD1O75127 700 aaKnown RBP14.19□□□□□ -0.14
NDUFA3-209ENST00000451517 LRP10Q7Z4F1 713 aa14.19□□□□□ -0.14
NDUFA3-209ENST00000451517 ADCY9O60503 1353 aa14.19□□□□□ -0.14
NDUFA3-209ENST00000451517 HDAC1Q13547 482 aaPredicted RBP14.18□□□□□ -0.14
NDUFA3-209ENST00000451517 SLC4A10Q6U841 1118 aa14.18□□□□□ -0.14
NDUFA3-209ENST00000451517 DNAAF4Q8WXU2 420 aa14.18□□□□□ -0.14
NDUFA3-209ENST00000451517 TEX13AQ9BXU3 409 aaPredicted RBP14.18□□□□□ -0.14
NDUFA3-209ENST00000451517 RWDD1Q9H446 243 aaPredicted RBP14.18□□□□□ -0.14
NDUFA3-209ENST00000451517 PI4KAP2A4QPH2 592 aa14.17□□□□□ -0.14
NDUFA3-209ENST00000451517 PI4KAP1Q8N8J0 262 aa14.17□□□□□ -0.14
NDUFA3-209ENST00000451517 SYTL4Q96C24 671 aaPredicted RBP14.17□□□□□ -0.14
NDUFA3-209ENST00000451517 DDX58O95786 925 aaKnown RBP14.16□□□□□ -0.14
NDUFA3-209ENST00000451517 KSR2Q6VAB6 950 aa14.16□□□□□ -0.14
NDUFA3-209ENST00000451517 ACSBG1Q96GR2 724 aa14.16□□□□□ -0.14
NDUFA3-209ENST00000451517 MEIS3Q99687 375 aa14.16□□□□□ -0.14
NDUFA3-209ENST00000451517 QTRT2Q9H974 415 aaKnown RBP14.16□□□□□ -0.14
NDUFA3-209ENST00000451517 IBTKQ9P2D0 1353 aaPredicted RBP14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 A0A0G2JS52 829 aa14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 NBPF26B4DH59 902 aa14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 MYL6BP14649 208 aa14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 MYT1Q01538 1121 aa14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 BEND3Q5T5X7 828 aa14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 NBPF14Q5TI25 921 aa14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 NBPF10Q6P3W6 841 aaKnown RBP14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 NBPF15Q8N660 670 aa14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 XAGE3Q8WTP9 111 aa14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 SLC4A9Q96Q91 983 aa14.15□□□□□ -0.14
NDUFA3-209ENST00000451517 COPS6Q7L5N1 327 aa14.14□□□□□ -0.15
NDUFA3-209ENST00000451517 DNAJC10Q8IXB1 793 aa14.14□□□□□ -0.15
NDUFA3-209ENST00000451517 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
NDUFA3-209ENST00000451517 SRCIN1Q9C0H9 1055 aa14.14□□□□□ -0.15
NDUFA3-209ENST00000451517 C1orf115Q9H7X2 142 aa14.14□□□□□ -0.15
NDUFA3-209ENST00000451517 MAP3K2Q9Y2U5 619 aa14.14□□□□□ -0.15
NDUFA3-209ENST00000451517 CICQ96RK0 1608 aaPredicted RBP14.14□□□□□ -0.15
NDUFA3-209ENST00000451517 TJP1Q07157 1748 aa14.13□□□□□ -0.15
NDUFA3-209ENST00000451517 ALDH1L1O75891 902 aa14.13□□□□□ -0.15
NDUFA3-209ENST00000451517 STARD3NLO95772 234 aa14.13□□□□□ -0.15
NDUFA3-209ENST00000451517 A1BGP04217 495 aa14.13□□□□□ -0.15
NDUFA3-209ENST00000451517 GNAI3P08754 354 aa14.13□□□□□ -0.15
NDUFA3-209ENST00000451517 PIP4K2AP48426 406 aaPredicted RBP14.13□□□□□ -0.15
NDUFA3-209ENST00000451517 AIMP1Q12904 312 aaKnown RBP14.13□□□□□ -0.15
NDUFA3-209ENST00000451517 SEPT12Q8IYM1 358 aa14.13□□□□□ -0.15
NDUFA3-209ENST00000451517 SMARCC1Q92922 1105 aaPredicted RBP14.13□□□□□ -0.15
NDUFA3-209ENST00000451517 NHSQ6T4R5 1651 aa14.12□□□□□ -0.15
NDUFA3-209ENST00000451517 KCNQ2O43526 872 aa14.12□□□□□ -0.15
NDUFA3-209ENST00000451517 CYP19A1P11511 503 aaPredicted RBP14.12□□□□□ -0.15
NDUFA3-209ENST00000451517 SIRT2Q8IXJ6 389 aa14.12□□□□□ -0.15
NDUFA3-209ENST00000451517 ANKRD44Q8N8A2 993 aa14.12□□□□□ -0.15
NDUFA3-209ENST00000451517 USP44Q9H0E7 712 aa14.12□□□□□ -0.15
NDUFA3-209ENST00000451517 PALLDQ8WX93 1383 aa14.11□□□□□ -0.15
NDUFA3-209ENST00000451517 GNAI2P04899 355 aa14.11□□□□□ -0.15
NDUFA3-209ENST00000451517 ZNF772Q68DY9 489 aaPredicted RBP14.11□□□□□ -0.15
NDUFA3-209ENST00000451517 CEP85Q6P2H3 762 aa14.11□□□□□ -0.15
NDUFA3-209ENST00000451517 ANKRD13DQ6ZTN6 518 aa14.11□□□□□ -0.15
NDUFA3-209ENST00000451517 RIC3Q7Z5B4 369 aa14.11□□□□□ -0.15
NDUFA3-209ENST00000451517 RPAP2Q8IXW5 612 aaPredicted RBP14.11□□□□□ -0.15
NDUFA3-209ENST00000451517 SMC5Q8IY18 1101 aa14.11□□□□□ -0.15
NDUFA3-209ENST00000451517 LINS1Q8NG48 757 aa14.11□□□□□ -0.15
NDUFA3-209ENST00000451517 PLBD2Q8NHP8 589 aa14.1□□□□□ -0.15
NDUFA3-209ENST00000451517 METTL22Q9BUU2 404 aaPredicted RBP14.1□□□□□ -0.15
NDUFA3-209ENST00000451517 ZNF831Q5JPB2 1677 aa14.1□□□□□ -0.15
NDUFA3-209ENST00000451517 LOC102724428A0A0B4J2F2 783 aa14.09□□□□□ -0.15
NDUFA3-209ENST00000451517 IGKV5-2P06315 115 aa14.09□□□□□ -0.15
NDUFA3-209ENST00000451517 UBTFL1P0CB47 393 aaPredicted RBP14.09□□□□□ -0.15
NDUFA3-209ENST00000451517 SIK1P57059 783 aa14.09□□□□□ -0.15
NDUFA3-209ENST00000451517 TTLL7Q6ZT98 887 aa14.09□□□□□ -0.15
NDUFA3-209ENST00000451517 RREB1Q92766 1687 aa14.08□□□□□ -0.16
NDUFA3-209ENST00000451517 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
NDUFA3-209ENST00000451517 NEXNQ0ZGT2 675 aa14.08□□□□□ -0.16
NDUFA3-209ENST00000451517 PDZRN3Q9UPQ7 1066 aa14.08□□□□□ -0.16
NDUFA3-209ENST00000451517 UTYO14607 1347 aa14.08□□□□□ -0.16
NDUFA3-209ENST00000451517 NUP188Q5SRE5 1749 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms