RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 N4BP2Q86UW6 1770 aaPredicted RBP27.03■■□□□ 1.92
TTC3-210ENST00000450533 BTBD11A6QL63 1104 aa27.02■■□□□ 1.92
TTC3-210ENST00000450533 CAVIN1Q6NZI2 390 aaKnown RBP27.02■■□□□ 1.92
TTC3-210ENST00000450533 RHPN1Q8TCX5 695 aa27.02■■□□□ 1.92
TTC3-210ENST00000450533 DNAAF4Q8WXU2 420 aa27.02■■□□□ 1.92
TTC3-210ENST00000450533 PRPF40AO75400 957 aaKnown RBP27.01■■□□□ 1.92
TTC3-210ENST00000450533 POLA2Q14181 598 aa27.01■■□□□ 1.92
TTC3-210ENST00000450533 RGPD2P0DJD1 1756 aa27.01■■□□□ 1.91
TTC3-210ENST00000450533 BEND3Q5T5X7 828 aa27.01■■□□□ 1.91
TTC3-210ENST00000450533 UPF3BQ9BZI7 483 aaKnown RBP27.01■■□□□ 1.91
TTC3-210ENST00000450533 KCNH5Q8NCM2 988 aa26.99■■□□□ 1.91
TTC3-210ENST00000450533 CHD2O14647 1828 aaKnown RBP26.99■■□□□ 1.91
TTC3-210ENST00000450533 RAB11FIP3O75154 756 aa26.99■■□□□ 1.91
TTC3-210ENST00000450533 LMOD2Q6P5Q4 547 aa26.99■■□□□ 1.91
TTC3-210ENST00000450533 AKAP4Q5JQC9 854 aa26.98■■□□□ 1.91
TTC3-210ENST00000450533 MED1Q15648 1581 aaPredicted RBP26.98■■□□□ 1.91
TTC3-210ENST00000450533 AOX1Q06278 1338 aa26.98■■□□□ 1.91
TTC3-210ENST00000450533 PI4K2BQ8TCG2 481 aa26.97■■□□□ 1.91
TTC3-210ENST00000450533 ORAI2Q96SN7 254 aa26.97■■□□□ 1.91
TTC3-210ENST00000450533 ANAPC15P60006 121 aa26.97■■□□□ 1.91
TTC3-210ENST00000450533 PLEKHO1Q53GL0 409 aaPredicted RBP26.97■■□□□ 1.91
TTC3-210ENST00000450533 HOXB7P09629 217 aa26.96■■□□□ 1.91
TTC3-210ENST00000450533 MCM2P49736 904 aa26.96■■□□□ 1.91
TTC3-210ENST00000450533 KIF1BPQ96EK5 621 aa26.96■■□□□ 1.91
TTC3-210ENST00000450533 ADCY9O60503 1353 aa26.96■■□□□ 1.91
TTC3-210ENST00000450533 ZSCAN23Q3MJ62 389 aa26.95■■□□□ 1.91
TTC3-210ENST00000450533 KDM3BQ7LBC6 1761 aa26.95■■□□□ 1.9
TTC3-210ENST00000450533 GCP02774 474 aa26.95■■□□□ 1.9
TTC3-210ENST00000450533 TRHP20396 242 aaPredicted RBP26.95■■□□□ 1.9
TTC3-210ENST00000450533 NASPP49321 788 aaPredicted RBP26.95■■□□□ 1.9
TTC3-210ENST00000450533 GPT2Q8TD30 523 aa26.95■■□□□ 1.9
TTC3-210ENST00000450533 TRIM44Q96DX7 344 aaPredicted RBP26.94■■□□□ 1.9
TTC3-210ENST00000450533 RBM27Q9P2N5 1060 aaKnown RBP26.94■■□□□ 1.9
TTC3-210ENST00000450533 ERBB4Q15303 1308 aa26.94■■□□□ 1.9
TTC3-210ENST00000450533 PXDNQ92626 1479 aa26.94■■□□□ 1.9
TTC3-210ENST00000450533 PRAMEF22A3QJZ6 481 aa26.93■■□□□ 1.9
TTC3-210ENST00000450533 RNMTO43148 476 aaKnown RBP26.93■■□□□ 1.9
TTC3-210ENST00000450533 PROSER3Q2NL68 480 aa26.93■■□□□ 1.9
TTC3-210ENST00000450533 C1orf141Q5JVX7 400 aa26.93■■□□□ 1.9
TTC3-210ENST00000450533 ADGRL3Q9HAR2 1447 aa26.93■■□□□ 1.9
TTC3-210ENST00000450533 CUL4AQ13619 759 aa26.93■■□□□ 1.9
TTC3-210ENST00000450533 CLCN1P35523 988 aa26.92■■□□□ 1.9
TTC3-210ENST00000450533 OS9Q13438 667 aaPredicted RBP26.92■■□□□ 1.9
TTC3-210ENST00000450533 DBF4Q9UBU7 674 aaPredicted RBP26.91■■□□□ 1.9
TTC3-210ENST00000450533 MAP3K2Q9Y2U5 619 aa26.91■■□□□ 1.9
TTC3-210ENST00000450533 ESPNB1AK53 854 aa26.91■■□□□ 1.9
TTC3-210ENST00000450533 ZNF445P59923 1031 aa26.91■■□□□ 1.9
TTC3-210ENST00000450533 ARHGEF25Q86VW2 580 aa26.91■■□□□ 1.9
TTC3-210ENST00000450533 ANKRD24Q8TF21 1146 aa26.91■■□□□ 1.9
TTC3-210ENST00000450533 HSPA4P34932 840 aa26.9■■□□□ 1.9
TTC3-210ENST00000450533 AMOTQ4VCS5 1084 aa26.9■■□□□ 1.9
TTC3-210ENST00000450533 NSFL1CQ9UNZ2 370 aaKnown RBP26.9■■□□□ 1.9
TTC3-210ENST00000450533 LMO7Q8WWI1 1683 aa26.89■■□□□ 1.9
TTC3-210ENST00000450533 SGSM2O43147 1006 aa26.89■■□□□ 1.89
TTC3-210ENST00000450533 CHMP4AQ9BY43 222 aa26.89■■□□□ 1.89
TTC3-210ENST00000450533 C9orf78Q9NZ63 289 aaPredicted RBP26.89■■□□□ 1.89
TTC3-210ENST00000450533 GIGYF1O75420 1035 aaPredicted RBP26.88■■□□□ 1.89
TTC3-210ENST00000450533 BRD1O95696 1058 aa26.88■■□□□ 1.89
TTC3-210ENST00000450533 CWF19L2Q2TBE0 894 aaKnown RBP26.88■■□□□ 1.89
TTC3-210ENST00000450533 CNTROBQ8N137 903 aa26.88■■□□□ 1.89
TTC3-210ENST00000450533 AXIN2Q9Y2T1 843 aa26.88■■□□□ 1.89
TTC3-210ENST00000450533 FOXD4L6Q3SYB3 417 aaPredicted RBP26.88■■□□□ 1.89
TTC3-210ENST00000450533 CWC27Q6UX04 472 aaKnown RBP26.88■■□□□ 1.89
TTC3-210ENST00000450533 FOXD4L3Q6VB84 417 aaPredicted RBP26.88■■□□□ 1.89
TTC3-210ENST00000450533 PA2G4Q9UQ80 394 aaKnown RBP26.87■■□□□ 1.89
TTC3-210ENST00000450533 INTS4Q96HW7 963 aaKnown RBP26.87■■□□□ 1.89
TTC3-210ENST00000450533 SPG7Q9UQ90 795 aa26.86■■□□□ 1.89
TTC3-210ENST00000450533 RAD50Q92878 1312 aa26.86■■□□□ 1.89
TTC3-210ENST00000450533 PRIM1P49642 420 aaKnown RBP26.85■■□□□ 1.89
TTC3-210ENST00000450533 HSP90AB4PQ58FF6 505 aa26.85■■□□□ 1.89
TTC3-210ENST00000450533 IL17RAQ96F46 866 aa26.85■■□□□ 1.89
TTC3-210ENST00000450533 TMEM63CQ9P1W3 806 aa26.85■■□□□ 1.89
TTC3-210ENST00000450533 CCDC173Q0VFZ6 552 aa26.84■■□□□ 1.89
TTC3-210ENST00000450533 ANP32BQ92688 251 aaKnown RBP26.84■■□□□ 1.89
TTC3-210ENST00000450533 LARP6Q9BRS8 491 aaKnown RBP26.84■■□□□ 1.89
TTC3-210ENST00000450533 LSG1Q9H089 658 aaKnown RBP26.84■■□□□ 1.89
TTC3-210ENST00000450533 RBSNQ9H1K0 784 aa26.84■■□□□ 1.89
TTC3-210ENST00000450533 SNX14Q9Y5W7 946 aa26.84■■□□□ 1.89
TTC3-210ENST00000450533 KSR2Q6VAB6 950 aa26.83■■□□□ 1.89
TTC3-210ENST00000450533 RASEFQ8IZ41 740 aa26.83■■□□□ 1.89
TTC3-210ENST00000450533 AIMP1Q12904 312 aaKnown RBP26.83■■□□□ 1.89
TTC3-210ENST00000450533 CLASRPQ8N2M8 674 aaKnown RBP26.82■■□□□ 1.88
TTC3-210ENST00000450533 PHRF1Q9P1Y6 1649 aaKnown RBP26.82■■□□□ 1.88
TTC3-210ENST00000450533 PPP1R9BQ96SB3 815 aa26.82■■□□□ 1.88
TTC3-210ENST00000450533 MTX1Q13505 466 aa26.81■■□□□ 1.88
TTC3-210ENST00000450533 SYCE3A1L190 88 aa26.81■■□□□ 1.88
TTC3-210ENST00000450533 EPB41L2O43491 1005 aaKnown RBP26.81■■□□□ 1.88
TTC3-210ENST00000450533 GLRX3O76003 335 aaKnown RBP26.81■■□□□ 1.88
TTC3-210ENST00000450533 KIAA1211Q6ZU35 1233 aa26.81■■□□□ 1.88
TTC3-210ENST00000450533 ALDH1L1O75891 902 aa26.8■■□□□ 1.88
TTC3-210ENST00000450533 NCAPD2Q15021 1401 aa26.8■■□□□ 1.88
TTC3-210ENST00000450533 TTC41PQ6P2S7 1318 aa26.79■■□□□ 1.88
TTC3-210ENST00000450533 GDPD2Q9HCC8 539 aa26.79■■□□□ 1.88
TTC3-210ENST00000450533 CPA1P15085 419 aa26.79■■□□□ 1.88
TTC3-210ENST00000450533 ZC3H6P61129 1189 aaKnown RBP26.79■■□□□ 1.88
TTC3-210ENST00000450533 NAP1L5Q96NT1 182 aaPredicted RBP26.79■■□□□ 1.88
TTC3-210ENST00000450533 DIAPH3Q9NSV4 1193 aa26.79■■□□□ 1.88
TTC3-210ENST00000450533 HEG1Q9ULI3 1381 aa26.78■■□□□ 1.88
TTC3-210ENST00000450533 USP42Q9H9J4 1324 aaKnown RBP26.78■■□□□ 1.88
TTC3-210ENST00000450533 KRT28Q7Z3Y7 464 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms