RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 TM4SF1P30408 202 aa16.52■□□□□ 0.24
MSH5-209ENST00000450148 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.24
MSH5-209ENST00000450148 BCL2L12Q9HB09 334 aa16.52■□□□□ 0.24
MSH5-209ENST00000450148 TGFB2P61812 414 aa16.51■□□□□ 0.23
MSH5-209ENST00000450148 USPL1Q5W0Q7 1092 aa16.51■□□□□ 0.23
MSH5-209ENST00000450148 NARFQ9UHQ1 456 aa16.51■□□□□ 0.23
MSH5-209ENST00000450148 WWC3Q9ULE0 1092 aa16.51■□□□□ 0.23
MSH5-209ENST00000450148 PARP3Q9Y6F1 533 aa16.51■□□□□ 0.23
MSH5-209ENST00000450148 POLRMTO00411 1230 aaKnown RBP16.5■□□□□ 0.23
MSH5-209ENST00000450148 EIF5P55010 431 aaKnown RBP16.5■□□□□ 0.23
MSH5-209ENST00000450148 MCM10Q7L590 875 aa16.5■□□□□ 0.23
MSH5-209ENST00000450148 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
MSH5-209ENST00000450148 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
MSH5-209ENST00000450148 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
MSH5-209ENST00000450148 KCNA3P22001 575 aa16.49■□□□□ 0.23
MSH5-209ENST00000450148 DCTN1Q14203 1278 aa16.49■□□□□ 0.23
MSH5-209ENST00000450148 SCN7AQ01118 1682 aa16.49■□□□□ 0.23
MSH5-209ENST00000450148 A0A0G2JLW4 131 aa16.48■□□□□ 0.23
MSH5-209ENST00000450148 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
MSH5-209ENST00000450148 HTATSF1O43719 755 aaKnown RBP16.48■□□□□ 0.23
MSH5-209ENST00000450148 ZPR1O75312 459 aa16.48■□□□□ 0.23
MSH5-209ENST00000450148 DPEP1P16444 411 aa16.48■□□□□ 0.23
MSH5-209ENST00000450148 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
MSH5-209ENST00000450148 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
MSH5-209ENST00000450148 ADCY9O60503 1353 aa16.48■□□□□ 0.23
MSH5-209ENST00000450148 KDM3BQ7LBC6 1761 aa16.47■□□□□ 0.23
MSH5-209ENST00000450148 STARD3NLO95772 234 aa16.47■□□□□ 0.23
MSH5-209ENST00000450148 NFIXQ14938 502 aa16.47■□□□□ 0.23
MSH5-209ENST00000450148 TEX13AQ9BXU3 409 aaPredicted RBP16.47■□□□□ 0.23
MSH5-209ENST00000450148 BCORQ6W2J9 1755 aa16.46■□□□□ 0.23
MSH5-209ENST00000450148 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
MSH5-209ENST00000450148 PRAMEF22A3QJZ6 481 aa16.45■□□□□ 0.22
MSH5-209ENST00000450148 A1BGP04217 495 aa16.45■□□□□ 0.22
MSH5-209ENST00000450148 RALBP1Q15311 655 aa16.45■□□□□ 0.22
MSH5-209ENST00000450148 RTF1Q92541 710 aaKnown RBP16.45■□□□□ 0.22
MSH5-209ENST00000450148 USP16Q9Y5T5 823 aa16.45■□□□□ 0.22
MSH5-209ENST00000450148 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
MSH5-209ENST00000450148 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
MSH5-209ENST00000450148 IL6STP40189 918 aaPredicted RBP16.44■□□□□ 0.22
MSH5-209ENST00000450148 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
MSH5-209ENST00000450148 BCS1LQ9Y276 419 aa16.43■□□□□ 0.22
MSH5-209ENST00000450148 ATP10DQ9P241 1426 aa16.43■□□□□ 0.22
MSH5-209ENST00000450148 A0A087WZG4 1122 aa16.42■□□□□ 0.22
MSH5-209ENST00000450148 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
MSH5-209ENST00000450148 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
MSH5-209ENST00000450148 SERPINB2P05120 415 aa16.41■□□□□ 0.22
MSH5-209ENST00000450148 CHRNA5P30532 468 aa16.41■□□□□ 0.22
MSH5-209ENST00000450148 TBC1D2BQ9UPU7 963 aa16.41■□□□□ 0.22
MSH5-209ENST00000450148 SBF1O95248 1867 aa16.41■□□□□ 0.22
MSH5-209ENST00000450148 CARMIL3Q8ND23 1372 aa16.4■□□□□ 0.22
MSH5-209ENST00000450148 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
MSH5-209ENST00000450148 SNRPA1P09661 255 aaKnown RBP16.4■□□□□ 0.22
MSH5-209ENST00000450148 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
MSH5-209ENST00000450148 TBC1D9BQ66K14 1250 aa16.4■□□□□ 0.22
MSH5-209ENST00000450148 MIS18AQ9NYP9 233 aa16.4■□□□□ 0.22
MSH5-209ENST00000450148 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
MSH5-209ENST00000450148 PIM2Q9P1W9 311 aa16.39■□□□□ 0.21
MSH5-209ENST00000450148 MYBBP1AQ9BQG0 1328 aaKnown RBP16.39■□□□□ 0.21
MSH5-209ENST00000450148 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
MSH5-209ENST00000450148 NEFMP07197 916 aa16.38■□□□□ 0.21
MSH5-209ENST00000450148 C1QTNF8P60827 252 aa16.38■□□□□ 0.21
MSH5-209ENST00000450148 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
MSH5-209ENST00000450148 BICDL1Q6ZP65 573 aa16.38■□□□□ 0.21
MSH5-209ENST00000450148 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
MSH5-209ENST00000450148 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
MSH5-209ENST00000450148 COL11A2P13942 1736 aaPredicted RBP16.37■□□□□ 0.21
MSH5-209ENST00000450148 PNNQ9H307 717 aaKnown RBP16.37■□□□□ 0.21
MSH5-209ENST00000450148 DALRD3Q5D0E6 543 aaKnown RBP16.36■□□□□ 0.21
MSH5-209ENST00000450148 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
MSH5-209ENST00000450148 MAPK8IP3Q9UPT6 1336 aa16.36■□□□□ 0.21
MSH5-209ENST00000450148 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
MSH5-209ENST00000450148 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
MSH5-209ENST00000450148 PRR5LQ6MZQ0 368 aa16.35■□□□□ 0.21
MSH5-209ENST00000450148 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
MSH5-209ENST00000450148 PNISRQ8TF01 805 aaKnown RBP16.35■□□□□ 0.21
MSH5-209ENST00000450148 NUP98P52948 1817 aa16.34■□□□□ 0.21
MSH5-209ENST00000450148 CCDC88AQ3V6T2 1871 aa16.34■□□□□ 0.21
MSH5-209ENST00000450148 TMPOP42166 694 aaKnown RBP16.34■□□□□ 0.21
MSH5-209ENST00000450148 PRKRIP1Q9H875 184 aaPredicted RBP16.33■□□□□ 0.2
MSH5-209ENST00000450148 RIPK4P57078 832 aa16.32■□□□□ 0.2
MSH5-209ENST00000450148 CACNA1SQ13698 1873 aa16.32■□□□□ 0.2
MSH5-209ENST00000450148 CLEC4GQ6UXB4 293 aa16.32■□□□□ 0.2
MSH5-209ENST00000450148 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
MSH5-209ENST00000450148 GPBP1L1Q9HC44 474 aaPredicted RBP16.32■□□□□ 0.2
MSH5-209ENST00000450148 ARFGEF2Q9Y6D5 1785 aa16.32■□□□□ 0.2
MSH5-209ENST00000450148 RGL2O15211 777 aa16.31■□□□□ 0.2
MSH5-209ENST00000450148 NPM2Q86SE8 214 aaKnown RBP16.31■□□□□ 0.2
MSH5-209ENST00000450148 C2CD5Q86YS7 1000 aa16.31■□□□□ 0.2
MSH5-209ENST00000450148 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
MSH5-209ENST00000450148 SETDB2Q96T68 719 aa16.31■□□□□ 0.2
MSH5-209ENST00000450148 BRIP1Q9BX63 1249 aa16.31■□□□□ 0.2
MSH5-209ENST00000450148 FER1L6Q2WGJ9 1857 aa16.31■□□□□ 0.2
MSH5-209ENST00000450148 KIF3CO14782 793 aa16.3■□□□□ 0.2
MSH5-209ENST00000450148 CCDC146Q8IYE0 955 aa16.3■□□□□ 0.2
MSH5-209ENST00000450148 SLX4Q8IY92 1834 aa16.3■□□□□ 0.2
MSH5-209ENST00000450148 H0YIN7 160 aa16.29■□□□□ 0.2
MSH5-209ENST00000450148 PRELPP51888 382 aa16.29■□□□□ 0.2
MSH5-209ENST00000450148 HLFQ16534 295 aa16.29■□□□□ 0.2
MSH5-209ENST00000450148 C9orf131Q5VYM1 1079 aa16.29■□□□□ 0.2
MSH5-209ENST00000450148 TTLL6Q8N841 843 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms