RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
SEC22C-209ENST00000449617 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
SEC22C-209ENST00000449617 BTBD11A6QL63 1104 aa17.4■□□□□ 0.38
SEC22C-209ENST00000449617 KCNQ3O43525 872 aa17.4■□□□□ 0.38
SEC22C-209ENST00000449617 ZPR1O75312 459 aa17.4■□□□□ 0.38
SEC22C-209ENST00000449617 STARD3NLO95772 234 aa17.4■□□□□ 0.38
SEC22C-209ENST00000449617 DCTN1Q14203 1278 aa17.4■□□□□ 0.38
SEC22C-209ENST00000449617 RALBP1Q15311 655 aa17.4■□□□□ 0.38
SEC22C-209ENST00000449617 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.38
SEC22C-209ENST00000449617 DDR1Q08345 913 aa17.39■□□□□ 0.38
SEC22C-209ENST00000449617 USPL1Q5W0Q7 1092 aa17.39■□□□□ 0.38
SEC22C-209ENST00000449617 FMNL2Q96PY5 1086 aa17.39■□□□□ 0.38
SEC22C-209ENST00000449617 HTATSF1O43719 755 aaKnown RBP17.38■□□□□ 0.37
SEC22C-209ENST00000449617 NEFMP07197 916 aa17.38■□□□□ 0.37
SEC22C-209ENST00000449617 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
SEC22C-209ENST00000449617 TEX13AQ9BXU3 409 aaPredicted RBP17.38■□□□□ 0.37
SEC22C-209ENST00000449617 NARFQ9UHQ1 456 aa17.38■□□□□ 0.37
SEC22C-209ENST00000449617 TGFB2P61812 414 aa17.37■□□□□ 0.37
SEC22C-209ENST00000449617 BRCA1P38398 1863 aaKnown RBP17.36■□□□□ 0.37
SEC22C-209ENST00000449617 A0A0G2JLW4 131 aa17.36■□□□□ 0.37
SEC22C-209ENST00000449617 POLRMTO00411 1230 aaKnown RBP17.36■□□□□ 0.37
SEC22C-209ENST00000449617 TM4SF1P30408 202 aa17.36■□□□□ 0.37
SEC22C-209ENST00000449617 EIF5P55010 431 aaKnown RBP17.36■□□□□ 0.37
SEC22C-209ENST00000449617 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
SEC22C-209ENST00000449617 AFDNP55196 1824 aaKnown RBP17.35■□□□□ 0.37
SEC22C-209ENST00000449617 DPEP1P16444 411 aa17.35■□□□□ 0.37
SEC22C-209ENST00000449617 BCL2L12Q9HB09 334 aa17.35■□□□□ 0.37
SEC22C-209ENST00000449617 NFIXQ14938 502 aa17.34■□□□□ 0.37
SEC22C-209ENST00000449617 NFE2L2Q16236 605 aa17.34■□□□□ 0.37
SEC22C-209ENST00000449617 MYBBP1AQ9BQG0 1328 aaKnown RBP17.34■□□□□ 0.37
SEC22C-209ENST00000449617 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
SEC22C-209ENST00000449617 MAPK8IP3Q9UPT6 1336 aa17.33■□□□□ 0.37
SEC22C-209ENST00000449617 A0A087WZG4 1122 aa17.33■□□□□ 0.36
SEC22C-209ENST00000449617 A1BGP04217 495 aa17.33■□□□□ 0.36
SEC22C-209ENST00000449617 NRXN2Q9P2S2 1712 aa17.33■□□□□ 0.36
SEC22C-209ENST00000449617 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
SEC22C-209ENST00000449617 IL6STP40189 918 aaPredicted RBP17.32■□□□□ 0.36
SEC22C-209ENST00000449617 TAF7Q15545 349 aaPredicted RBP17.32■□□□□ 0.36
SEC22C-209ENST00000449617 PNNQ9H307 717 aaKnown RBP17.32■□□□□ 0.36
SEC22C-209ENST00000449617 BCS1LQ9Y276 419 aa17.32■□□□□ 0.36
SEC22C-209ENST00000449617 KDM3BQ7LBC6 1761 aa17.32■□□□□ 0.36
SEC22C-209ENST00000449617 SNRPA1P09661 255 aaKnown RBP17.31■□□□□ 0.36
SEC22C-209ENST00000449617 THUMPD2Q9BTF0 503 aaKnown RBP17.31■□□□□ 0.36
SEC22C-209ENST00000449617 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
SEC22C-209ENST00000449617 USP16Q9Y5T5 823 aa17.31■□□□□ 0.36
SEC22C-209ENST00000449617 KCNA3P22001 575 aa17.3■□□□□ 0.36
SEC22C-209ENST00000449617 TBC1D2BQ9UPU7 963 aa17.3■□□□□ 0.36
SEC22C-209ENST00000449617 LAMB4A4D0S4 1761 aa17.3■□□□□ 0.36
SEC22C-209ENST00000449617 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
SEC22C-209ENST00000449617 ARFGEF1Q9Y6D6 1849 aa17.3■□□□□ 0.36
SEC22C-209ENST00000449617 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
SEC22C-209ENST00000449617 BICDL1Q6ZP65 573 aa17.3■□□□□ 0.36
SEC22C-209ENST00000449617 ADCY9O60503 1353 aa17.29■□□□□ 0.36
SEC22C-209ENST00000449617 SERPINB2P05120 415 aa17.29■□□□□ 0.36
SEC22C-209ENST00000449617 CHRNA5P30532 468 aa17.29■□□□□ 0.36
SEC22C-209ENST00000449617 NPM2Q86SE8 214 aaKnown RBP17.29■□□□□ 0.36
SEC22C-209ENST00000449617 ATP10DQ9P241 1426 aa17.28■□□□□ 0.36
SEC22C-209ENST00000449617 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
SEC22C-209ENST00000449617 TBC1D9BQ66K14 1250 aa17.28■□□□□ 0.36
SEC22C-209ENST00000449617 PIM2Q9P1W9 311 aa17.28■□□□□ 0.36
SEC22C-209ENST00000449617 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.35
SEC22C-209ENST00000449617 CARMIL3Q8ND23 1372 aa17.27■□□□□ 0.35
SEC22C-209ENST00000449617 DLEC1Q9Y238 1755 aa17.26■□□□□ 0.35
SEC22C-209ENST00000449617 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
SEC22C-209ENST00000449617 NBPF26B4DH59 902 aa17.25■□□□□ 0.35
SEC22C-209ENST00000449617 RIPK4P57078 832 aa17.25■□□□□ 0.35
SEC22C-209ENST00000449617 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
SEC22C-209ENST00000449617 NBPF10Q6P3W6 841 aaKnown RBP17.25■□□□□ 0.35
SEC22C-209ENST00000449617 NBPF15Q8N660 670 aa17.25■□□□□ 0.35
SEC22C-209ENST00000449617 PRKRIP1Q9H875 184 aaPredicted RBP17.25■□□□□ 0.35
SEC22C-209ENST00000449617 ANKRD31Q8N7Z5 1873 aa17.25■□□□□ 0.35
SEC22C-209ENST00000449617 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
SEC22C-209ENST00000449617 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
SEC22C-209ENST00000449617 ARHGAP27Q6ZUM4 889 aa17.24■□□□□ 0.35
SEC22C-209ENST00000449617 CCDC146Q8IYE0 955 aa17.24■□□□□ 0.35
SEC22C-209ENST00000449617 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
SEC22C-209ENST00000449617 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
SEC22C-209ENST00000449617 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
SEC22C-209ENST00000449617 GIGYF1O75420 1035 aaPredicted RBP17.22■□□□□ 0.35
SEC22C-209ENST00000449617 PRR5LQ6MZQ0 368 aa17.21■□□□□ 0.35
SEC22C-209ENST00000449617 C2CD5Q86YS7 1000 aa17.21■□□□□ 0.35
SEC22C-209ENST00000449617 ZNF526Q8TF50 670 aaPredicted RBP17.21■□□□□ 0.35
SEC22C-209ENST00000449617 SETDB2Q96T68 719 aa17.21■□□□□ 0.35
SEC22C-209ENST00000449617 TSPYL4Q9UJ04 414 aa17.21■□□□□ 0.35
SEC22C-209ENST00000449617 COL11A2P13942 1736 aaPredicted RBP17.21■□□□□ 0.35
SEC22C-209ENST00000449617 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.34
SEC22C-209ENST00000449617 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.34
SEC22C-209ENST00000449617 C1QTNF8P60827 252 aa17.2■□□□□ 0.34
SEC22C-209ENST00000449617 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
SEC22C-209ENST00000449617 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
SEC22C-209ENST00000449617 CNBD1Q8NA66 436 aa17.2■□□□□ 0.34
SEC22C-209ENST00000449617 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
SEC22C-209ENST00000449617 GPBP1L1Q9HC44 474 aaPredicted RBP17.2■□□□□ 0.34
SEC22C-209ENST00000449617 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
SEC22C-209ENST00000449617 ZNF652Q9Y2D9 606 aa17.2■□□□□ 0.34
SEC22C-209ENST00000449617 H0YIN7 160 aa17.19■□□□□ 0.34
SEC22C-209ENST00000449617 BRIP1Q9BX63 1249 aa17.19■□□□□ 0.34
SEC22C-209ENST00000449617 NPHP1O15259 732 aa17.18■□□□□ 0.34
SEC22C-209ENST00000449617 PDE6BP35913 854 aa17.17■□□□□ 0.34
SEC22C-209ENST00000449617 C9orf131Q5VYM1 1079 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms