RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.53
TOM1-211ENST00000449508 STARD3NLO95772 234 aa18.33■□□□□ 0.52
TOM1-211ENST00000449508 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.52
TOM1-211ENST00000449508 TM4SF1P30408 202 aa18.33■□□□□ 0.52
TOM1-211ENST00000449508 DDR1Q08345 913 aa18.33■□□□□ 0.52
TOM1-211ENST00000449508 NARFQ9UHQ1 456 aa18.33■□□□□ 0.52
TOM1-211ENST00000449508 FCHSD2O94868 740 aa18.32■□□□□ 0.52
TOM1-211ENST00000449508 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
TOM1-211ENST00000449508 COL15A1P39059 1388 aa18.31■□□□□ 0.52
TOM1-211ENST00000449508 POLRMTO00411 1230 aaKnown RBP18.31■□□□□ 0.52
TOM1-211ENST00000449508 KCNA3P22001 575 aa18.31■□□□□ 0.52
TOM1-211ENST00000449508 TEX13AQ9BXU3 409 aaPredicted RBP18.31■□□□□ 0.52
TOM1-211ENST00000449508 GPBP1L1Q9HC44 474 aaPredicted RBP18.31■□□□□ 0.52
TOM1-211ENST00000449508 SIPA1L3O60292 1781 aaPredicted RBP18.3■□□□□ 0.52
TOM1-211ENST00000449508 ARHGAP27Q6ZUM4 889 aa18.3■□□□□ 0.52
TOM1-211ENST00000449508 ZNF526Q8TF50 670 aaPredicted RBP18.3■□□□□ 0.52
TOM1-211ENST00000449508 PIM2Q9P1W9 311 aa18.3■□□□□ 0.52
TOM1-211ENST00000449508 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
TOM1-211ENST00000449508 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
TOM1-211ENST00000449508 BTBD11A6QL63 1104 aa18.29■□□□□ 0.52
TOM1-211ENST00000449508 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
TOM1-211ENST00000449508 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
TOM1-211ENST00000449508 CEMIPQ8WUJ3 1361 aa18.29■□□□□ 0.52
TOM1-211ENST00000449508 NFIXQ14938 502 aa18.28■□□□□ 0.52
TOM1-211ENST00000449508 BRCA1P38398 1863 aaKnown RBP18.28■□□□□ 0.52
TOM1-211ENST00000449508 ADCY9O60503 1353 aa18.28■□□□□ 0.52
TOM1-211ENST00000449508 A0A087WZG4 1122 aa18.27■□□□□ 0.52
TOM1-211ENST00000449508 KCNQ3O43525 872 aa18.27■□□□□ 0.52
TOM1-211ENST00000449508 CHRNA5P30532 468 aa18.27■□□□□ 0.52
TOM1-211ENST00000449508 EIF5P55010 431 aaKnown RBP18.27■□□□□ 0.52
TOM1-211ENST00000449508 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
TOM1-211ENST00000449508 ZNF330Q9Y3S2 320 aaPredicted RBP18.27■□□□□ 0.52
TOM1-211ENST00000449508 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
TOM1-211ENST00000449508 SERPINB2P05120 415 aa18.26■□□□□ 0.51
TOM1-211ENST00000449508 DALRD3Q5D0E6 543 aaKnown RBP18.26■□□□□ 0.51
TOM1-211ENST00000449508 MCM10Q7L590 875 aa18.26■□□□□ 0.51
TOM1-211ENST00000449508 BICDL1Q6ZP65 573 aa18.25■□□□□ 0.51
TOM1-211ENST00000449508 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
TOM1-211ENST00000449508 ARFGEF1Q9Y6D6 1849 aa18.24■□□□□ 0.51
TOM1-211ENST00000449508 A1BGP04217 495 aa18.24■□□□□ 0.51
TOM1-211ENST00000449508 DCTN1Q14203 1278 aa18.24■□□□□ 0.51
TOM1-211ENST00000449508 TBC1D2BQ9UPU7 963 aa18.24■□□□□ 0.51
TOM1-211ENST00000449508 HTATSF1O43719 755 aaKnown RBP18.23■□□□□ 0.51
TOM1-211ENST00000449508 NEFMP07197 916 aa18.23■□□□□ 0.51
TOM1-211ENST00000449508 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
TOM1-211ENST00000449508 USP16Q9Y5T5 823 aa18.22■□□□□ 0.51
TOM1-211ENST00000449508 TBC1D9BQ66K14 1250 aa18.21■□□□□ 0.51
TOM1-211ENST00000449508 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
TOM1-211ENST00000449508 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
TOM1-211ENST00000449508 TAF7Q15545 349 aaPredicted RBP18.2■□□□□ 0.5
TOM1-211ENST00000449508 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
TOM1-211ENST00000449508 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
TOM1-211ENST00000449508 H0YIN7 160 aa18.18■□□□□ 0.5
TOM1-211ENST00000449508 PIP4K2AP48426 406 aaPredicted RBP18.18■□□□□ 0.5
TOM1-211ENST00000449508 DZIP3Q86Y13 1208 aaKnown RBP18.18■□□□□ 0.5
TOM1-211ENST00000449508 C2CD5Q86YS7 1000 aa18.18■□□□□ 0.5
TOM1-211ENST00000449508 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
TOM1-211ENST00000449508 TTLL6Q8N841 843 aa18.17■□□□□ 0.5
TOM1-211ENST00000449508 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
TOM1-211ENST00000449508 PNNQ9H307 717 aaKnown RBP18.17■□□□□ 0.5
TOM1-211ENST00000449508 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
TOM1-211ENST00000449508 KIF3CO14782 793 aa18.16■□□□□ 0.5
TOM1-211ENST00000449508 CAMTA2O94983 1202 aa18.16■□□□□ 0.5
TOM1-211ENST00000449508 PLEKHF1Q96S99 279 aa18.16■□□□□ 0.5
TOM1-211ENST00000449508 CARMIL3Q8ND23 1372 aa18.16■□□□□ 0.5
TOM1-211ENST00000449508 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
TOM1-211ENST00000449508 CCDC24Q8N4L8 307 aa18.15■□□□□ 0.5
TOM1-211ENST00000449508 RNF181Q9P0P0 153 aa18.15■□□□□ 0.5
TOM1-211ENST00000449508 SBF1O95248 1867 aa18.15■□□□□ 0.5
TOM1-211ENST00000449508 NPHP1O15259 732 aa18.14■□□□□ 0.49
TOM1-211ENST00000449508 PDE6BP35913 854 aa18.14■□□□□ 0.49
TOM1-211ENST00000449508 RALBP1Q15311 655 aa18.14■□□□□ 0.49
TOM1-211ENST00000449508 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
TOM1-211ENST00000449508 PRR5LQ6MZQ0 368 aa18.14■□□□□ 0.49
TOM1-211ENST00000449508 BRIP1Q9BX63 1249 aa18.14■□□□□ 0.49
TOM1-211ENST00000449508 DLEC1Q9Y238 1755 aa18.14■□□□□ 0.49
TOM1-211ENST00000449508 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
TOM1-211ENST00000449508 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
TOM1-211ENST00000449508 ZNF622Q969S3 477 aaKnown RBP eCLIP18.13■□□□□ 0.49
TOM1-211ENST00000449508 PDZRN3Q9UPQ7 1066 aa18.13■□□□□ 0.49
TOM1-211ENST00000449508 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
TOM1-211ENST00000449508 ANKRD31Q8N7Z5 1873 aa18.12■□□□□ 0.49
TOM1-211ENST00000449508 NBPF26B4DH59 902 aa18.12■□□□□ 0.49
TOM1-211ENST00000449508 NBPF10Q6P3W6 841 aaKnown RBP18.12■□□□□ 0.49
TOM1-211ENST00000449508 CLEC4GQ6UXB4 293 aa18.12■□□□□ 0.49
TOM1-211ENST00000449508 NBPF15Q8N660 670 aa18.12■□□□□ 0.49
TOM1-211ENST00000449508 CNBD1Q8NA66 436 aa18.12■□□□□ 0.49
TOM1-211ENST00000449508 NMRK2Q9NPI5 230 aa18.12■□□□□ 0.49
TOM1-211ENST00000449508 RASSF7Q02833 373 aa18.11■□□□□ 0.49
TOM1-211ENST00000449508 THUMPD2Q9BTF0 503 aaKnown RBP18.11■□□□□ 0.49
TOM1-211ENST00000449508 ZNF652Q9Y2D9 606 aa18.11■□□□□ 0.49
TOM1-211ENST00000449508 BCORQ6W2J9 1755 aa18.11■□□□□ 0.49
TOM1-211ENST00000449508 TOMM70O94826 608 aa18.1■□□□□ 0.49
TOM1-211ENST00000449508 HSPA6P17066 643 aa18.1■□□□□ 0.49
TOM1-211ENST00000449508 ST5P78524 1137 aa18.1■□□□□ 0.49
TOM1-211ENST00000449508 CCDC88AQ3V6T2 1871 aa18.09■□□□□ 0.49
TOM1-211ENST00000449508 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
TOM1-211ENST00000449508 LMNB1P20700 586 aa18.09■□□□□ 0.49
TOM1-211ENST00000449508 NBPF5PQ86XG9 351 aaPredicted RBP18.09■□□□□ 0.49
TOM1-211ENST00000449508 ZNF219Q9P2Y4 722 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms