RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 CASC1Q6TDU7 716 aa22.99■■□□□ 1.27
HMGA1-205ENST00000447654 CUL4AQ13619 759 aa22.99■■□□□ 1.27
HMGA1-205ENST00000447654 NFE2L2Q16236 605 aa22.99■■□□□ 1.27
HMGA1-205ENST00000447654 PIK3R4Q99570 1358 aa22.98■■□□□ 1.27
HMGA1-205ENST00000447654 MX1P20591 662 aa22.98■■□□□ 1.27
HMGA1-205ENST00000447654 MMP14P50281 582 aa22.98■■□□□ 1.27
HMGA1-205ENST00000447654 FEZ2Q9UHY8 353 aaPredicted RBP22.98■■□□□ 1.27
HMGA1-205ENST00000447654 OVOS2A0A0J9YW53 1432 aa22.98■■□□□ 1.27
HMGA1-205ENST00000447654 OVOS2Q6IE36 1432 aa22.98■■□□□ 1.27
HMGA1-205ENST00000447654 CYP2C19P33261 490 aa22.97■■□□□ 1.27
HMGA1-205ENST00000447654 RGPD8O14715 1765 aaPredicted RBP22.97■■□□□ 1.27
HMGA1-205ENST00000447654 SSH2Q76I76 1423 aa22.97■■□□□ 1.27
HMGA1-205ENST00000447654 CTR9Q6PD62 1173 aa22.97■■□□□ 1.27
HMGA1-205ENST00000447654 CCDC112Q8NEF3 446 aa22.97■■□□□ 1.27
HMGA1-205ENST00000447654 PTCH1Q13635 1447 aa22.96■■□□□ 1.27
HMGA1-205ENST00000447654 REC8O95072 547 aa22.96■■□□□ 1.27
HMGA1-205ENST00000447654 AEBP1Q8IUX7 1158 aa22.96■■□□□ 1.27
HMGA1-205ENST00000447654 TTC22Q5TAA0 569 aa22.95■■□□□ 1.26
HMGA1-205ENST00000447654 RNF20Q5VTR2 975 aa22.95■■□□□ 1.26
HMGA1-205ENST00000447654 SOX12O15370 315 aa22.94■■□□□ 1.26
HMGA1-205ENST00000447654 GSPT1P15170 499 aaKnown RBP22.94■■□□□ 1.26
HMGA1-205ENST00000447654 KCNA6P17658 529 aa22.94■■□□□ 1.26
HMGA1-205ENST00000447654 EIF4A2Q14240 407 aaKnown RBP22.94■■□□□ 1.26
HMGA1-205ENST00000447654 KIF1BPQ96EK5 621 aa22.94■■□□□ 1.26
HMGA1-205ENST00000447654 FAM83GA6ND36 823 aa22.94■■□□□ 1.26
HMGA1-205ENST00000447654 PEAK1Q9H792 1746 aa22.93■■□□□ 1.26
HMGA1-205ENST00000447654 DIP2AQ14689 1571 aa22.93■■□□□ 1.26
HMGA1-205ENST00000447654 DLG5Q8TDM6 1919 aa22.93■■□□□ 1.26
HMGA1-205ENST00000447654 ADAMTSL3P82987 1691 aa22.93■■□□□ 1.26
HMGA1-205ENST00000447654 ZBTB7BO15156 539 aaPredicted RBP22.93■■□□□ 1.26
HMGA1-205ENST00000447654 HCLS1P14317 486 aaPredicted RBP22.93■■□□□ 1.26
HMGA1-205ENST00000447654 HSP90AB2PQ58FF8 381 aa22.93■■□□□ 1.26
HMGA1-205ENST00000447654 MPNDQ8N594 471 aa22.93■■□□□ 1.26
HMGA1-205ENST00000447654 ARHGAP45Q92619 1136 aa22.93■■□□□ 1.26
HMGA1-205ENST00000447654 PLEKHM2Q8IWE5 1019 aa22.92■■□□□ 1.26
HMGA1-205ENST00000447654 MUM1L1Q5H9M0 696 aa22.91■■□□□ 1.26
HMGA1-205ENST00000447654 FUCA2Q9BTY2 467 aa22.91■■□□□ 1.26
HMGA1-205ENST00000447654 WDR33Q9C0J8 1336 aaKnown RBP22.91■■□□□ 1.26
HMGA1-205ENST00000447654 XRN1Q8IZH2 1706 aaKnown RBP22.91■■□□□ 1.26
HMGA1-205ENST00000447654 DCTN1Q14203 1278 aa22.91■■□□□ 1.26
HMGA1-205ENST00000447654 TSPYL6Q8N831 410 aa22.91■■□□□ 1.26
HMGA1-205ENST00000447654 TMX3Q96JJ7 454 aa22.91■■□□□ 1.26
HMGA1-205ENST00000447654 CEP170BQ9Y4F5 1589 aaPredicted RBP22.9■■□□□ 1.26
HMGA1-205ENST00000447654 NALCNQ8IZF0 1738 aa22.9■■□□□ 1.26
HMGA1-205ENST00000447654 USP48Q86UV5 1035 aa22.9■■□□□ 1.26
HMGA1-205ENST00000447654 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.9■■□□□ 1.26
HMGA1-205ENST00000447654 TNNT1P13805 278 aa22.89■■□□□ 1.26
HMGA1-205ENST00000447654 SECISBP2LQ93073 1101 aaKnown RBP22.89■■□□□ 1.26
HMGA1-205ENST00000447654 NOL10Q9BSC4 688 aaKnown RBP22.89■■□□□ 1.26
HMGA1-205ENST00000447654 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.26
HMGA1-205ENST00000447654 USP31Q70CQ4 1352 aa22.89■■□□□ 1.25
HMGA1-205ENST00000447654 ZNF853P0CG23 659 aa22.89■■□□□ 1.25
HMGA1-205ENST00000447654 UBE2HP62256 183 aa22.88■■□□□ 1.25
HMGA1-205ENST00000447654 KMT5BQ4FZB7 885 aa22.88■■□□□ 1.25
HMGA1-205ENST00000447654 SULT6B1Q6IMI4 303 aa22.88■■□□□ 1.25
HMGA1-205ENST00000447654 MBIPQ9NS73 344 aa22.88■■□□□ 1.25
HMGA1-205ENST00000447654 RIMS1Q86UR5 1692 aaKnown RBP22.88■■□□□ 1.25
HMGA1-205ENST00000447654 GADD45BO75293 160 aaPredicted RBP22.87■■□□□ 1.25
HMGA1-205ENST00000447654 HNRNPH2P55795 449 aaKnown RBP22.87■■□□□ 1.25
HMGA1-205ENST00000447654 BMS1Q14692 1282 aaKnown RBP22.87■■□□□ 1.25
HMGA1-205ENST00000447654 RBM33Q96EV2 1170 aaKnown RBP22.87■■□□□ 1.25
HMGA1-205ENST00000447654 CHAMP1Q96JM3 812 aa22.87■■□□□ 1.25
HMGA1-205ENST00000447654 ERICH4A6NGS2 130 aa22.87■■□□□ 1.25
HMGA1-205ENST00000447654 RAD51AP2Q09MP3 1159 aa22.87■■□□□ 1.25
HMGA1-205ENST00000447654 ELL2O00472 640 aaPredicted RBP22.86■■□□□ 1.25
HMGA1-205ENST00000447654 KIF24Q5T7B8 1368 aa22.86■■□□□ 1.25
HMGA1-205ENST00000447654 RAD50Q92878 1312 aa22.86■■□□□ 1.25
HMGA1-205ENST00000447654 VAMP4O75379 141 aa22.86■■□□□ 1.25
HMGA1-205ENST00000447654 TNNT3P45378 269 aaPredicted RBP22.86■■□□□ 1.25
HMGA1-205ENST00000447654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.86■■□□□ 1.25
HMGA1-205ENST00000447654 NGDNQ8NEJ9 315 aaKnown RBP22.86■■□□□ 1.25
HMGA1-205ENST00000447654 ERO1AQ96HE7 468 aa22.86■■□□□ 1.25
HMGA1-205ENST00000447654 MAP3K19Q56UN5 1328 aa22.85■■□□□ 1.25
HMGA1-205ENST00000447654 BRD2P25440 801 aaKnown RBP22.85■■□□□ 1.25
HMGA1-205ENST00000447654 AXDND1Q5T1B0 1012 aaPredicted RBP22.84■■□□□ 1.25
HMGA1-205ENST00000447654 TXLNBQ8N3L3 684 aa22.84■■□□□ 1.25
HMGA1-205ENST00000447654 RASSF4Q9H2L5 321 aa22.84■■□□□ 1.25
HMGA1-205ENST00000447654 IFT57Q9NWB7 429 aa22.84■■□□□ 1.25
HMGA1-205ENST00000447654 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.84■■□□□ 1.25
HMGA1-205ENST00000447654 RBM6P78332 1123 aaKnown RBP22.84■■□□□ 1.25
HMGA1-205ENST00000447654 RTL1A6NKG5 1358 aa22.84■■□□□ 1.25
HMGA1-205ENST00000447654 RPAP1Q9BWH6 1393 aaPredicted RBP22.84■■□□□ 1.25
HMGA1-205ENST00000447654 ERC2O15083 957 aa22.83■■□□□ 1.25
HMGA1-205ENST00000447654 IL17RAQ96F46 866 aa22.83■■□□□ 1.25
HMGA1-205ENST00000447654 CCDC171Q6TFL3 1326 aa22.83■■□□□ 1.25
HMGA1-205ENST00000447654 ANAPC15P60006 121 aa22.83■■□□□ 1.24
HMGA1-205ENST00000447654 TEX35Q5T0J7 233 aa22.83■■□□□ 1.24
HMGA1-205ENST00000447654 C8orf58Q8NAV2 365 aa22.83■■□□□ 1.24
HMGA1-205ENST00000447654 CLGNO14967 610 aa22.82■■□□□ 1.24
HMGA1-205ENST00000447654 HTATSF1O43719 755 aaKnown RBP22.82■■□□□ 1.24
HMGA1-205ENST00000447654 SIRT2Q8IXJ6 389 aa22.82■■□□□ 1.24
HMGA1-205ENST00000447654 FBXO41Q8TF61 875 aa22.82■■□□□ 1.24
HMGA1-205ENST00000447654 PIK3C2AO00443 1686 aa22.82■■□□□ 1.24
HMGA1-205ENST00000447654 RGPD1P0DJD0 1748 aa22.82■■□□□ 1.24
HMGA1-205ENST00000447654 GNAI1P63096 354 aa22.82■■□□□ 1.24
HMGA1-205ENST00000447654 C16orf45Q96MC5 204 aaPredicted RBP22.82■■□□□ 1.24
HMGA1-205ENST00000447654 DCTPP1Q9H773 170 aa22.82■■□□□ 1.24
HMGA1-205ENST00000447654 TTC21AQ8NDW8 1320 aa22.81■■□□□ 1.24
HMGA1-205ENST00000447654 AP5Z1O43299 807 aa22.81■■□□□ 1.24
HMGA1-205ENST00000447654 NOP2P46087 812 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 596.3 ms