RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.21
DDX56-206ENST00000446987 IL17REQ8NFR9 667 aa16.33■□□□□ 0.21
DDX56-206ENST00000446987 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.21
DDX56-206ENST00000446987 ZNF831Q5JPB2 1677 aa16.33■□□□□ 0.2
DDX56-206ENST00000446987 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDX56-206ENST00000446987 ERBB4Q15303 1308 aa16.33■□□□□ 0.2
DDX56-206ENST00000446987 C5P01031 1676 aa16.33■□□□□ 0.2
DDX56-206ENST00000446987 TJP1Q07157 1748 aa16.32■□□□□ 0.2
DDX56-206ENST00000446987 KCPQ6ZWJ8 1503 aa16.32■□□□□ 0.2
DDX56-206ENST00000446987 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
DDX56-206ENST00000446987 GNAT3A8MTJ3 354 aa16.31■□□□□ 0.2
DDX56-206ENST00000446987 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
DDX56-206ENST00000446987 LRRC4BQ9NT99 713 aa16.31■□□□□ 0.2
DDX56-206ENST00000446987 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
DDX56-206ENST00000446987 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
DDX56-206ENST00000446987 SLC52A2Q9HAB3 445 aa16.31■□□□□ 0.2
DDX56-206ENST00000446987 TMOD3Q9NYL9 352 aa16.31■□□□□ 0.2
DDX56-206ENST00000446987 ASAP1Q9ULH1 1129 aa16.31■□□□□ 0.2
DDX56-206ENST00000446987 KDM3BQ7LBC6 1761 aa16.3■□□□□ 0.2
DDX56-206ENST00000446987 ATG3Q9NT62 314 aa16.3■□□□□ 0.2
DDX56-206ENST00000446987 DDX11L8A8MPP1 907 aa16.29■□□□□ 0.2
DDX56-206ENST00000446987 DCTN1Q14203 1278 aa16.29■□□□□ 0.2
DDX56-206ENST00000446987 RUNDC1Q96C34 613 aa16.29■□□□□ 0.2
DDX56-206ENST00000446987 MAPK8IP3Q9UPT6 1336 aa16.29■□□□□ 0.2
DDX56-206ENST00000446987 MCM10Q7L590 875 aa16.29■□□□□ 0.2
DDX56-206ENST00000446987 NFATC2IPQ8NCF5 419 aa16.29■□□□□ 0.2
DDX56-206ENST00000446987 TRAK2O60296 914 aa16.28■□□□□ 0.2
DDX56-206ENST00000446987 PTMSP20962 102 aa16.28■□□□□ 0.2
DDX56-206ENST00000446987 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
DDX56-206ENST00000446987 KCNQ4P56696 695 aa16.28■□□□□ 0.2
DDX56-206ENST00000446987 RIPK4P57078 832 aa16.28■□□□□ 0.2
DDX56-206ENST00000446987 CABP4P57796 275 aa16.28■□□□□ 0.2
DDX56-206ENST00000446987 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
DDX56-206ENST00000446987 QSER1Q2KHR3 1735 aa16.27■□□□□ 0.2
DDX56-206ENST00000446987 HS1BP3Q53T59 392 aa16.27■□□□□ 0.2
DDX56-206ENST00000446987 SLC4A9Q96Q91 983 aa16.27■□□□□ 0.2
DDX56-206ENST00000446987 PPP1R9BQ96SB3 815 aa16.27■□□□□ 0.2
DDX56-206ENST00000446987 DMTNQ08495 405 aa16.27■□□□□ 0.19
DDX56-206ENST00000446987 CCDC173Q0VFZ6 552 aa16.27■□□□□ 0.19
DDX56-206ENST00000446987 ZSCAN30Q86W11 494 aa16.27■□□□□ 0.19
DDX56-206ENST00000446987 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.19
DDX56-206ENST00000446987 C4BP0C0L5 1744 aa16.26■□□□□ 0.19
DDX56-206ENST00000446987 CASZ1Q86V15 1759 aa16.26■□□□□ 0.19
DDX56-206ENST00000446987 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
DDX56-206ENST00000446987 SKAP1Q86WV1 359 aa16.26■□□□□ 0.19
DDX56-206ENST00000446987 THUMPD2Q9BTF0 503 aaKnown RBP16.26■□□□□ 0.19
DDX56-206ENST00000446987 CHMP5Q9NZZ3 219 aa16.25■□□□□ 0.19
DDX56-206ENST00000446987 TRIM35Q9UPQ4 493 aa16.25■□□□□ 0.19
DDX56-206ENST00000446987 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
DDX56-206ENST00000446987 UBR3Q6ZT12 1888 aa16.24■□□□□ 0.19
DDX56-206ENST00000446987 MYH14Q7Z406 1995 aaKnown RBP16.24■□□□□ 0.19
DDX56-206ENST00000446987 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
DDX56-206ENST00000446987 LOC102724428A0A0B4J2F2 783 aa16.23■□□□□ 0.19
DDX56-206ENST00000446987 DYNC1I1O14576 645 aa16.23■□□□□ 0.19
DDX56-206ENST00000446987 APAF1O14727 1248 aa16.23■□□□□ 0.19
DDX56-206ENST00000446987 SIK1P57059 783 aa16.23■□□□□ 0.19
DDX56-206ENST00000446987 ITPK1Q13572 414 aa16.23■□□□□ 0.19
DDX56-206ENST00000446987 ZNF827Q17R98 1081 aa16.23■□□□□ 0.19
DDX56-206ENST00000446987 TAF7LQ5H9L4 462 aa16.23■□□□□ 0.19
DDX56-206ENST00000446987 SLC27A3Q5K4L6 730 aa16.23■□□□□ 0.19
DDX56-206ENST00000446987 KIF20AO95235 890 aa16.22■□□□□ 0.19
DDX56-206ENST00000446987 SLKQ9H2G2 1235 aaPredicted RBP16.22■□□□□ 0.19
DDX56-206ENST00000446987 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
DDX56-206ENST00000446987 PLIN1O60240 522 aa16.22■□□□□ 0.19
DDX56-206ENST00000446987 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
DDX56-206ENST00000446987 KCNQ3O43525 872 aa16.21■□□□□ 0.19
DDX56-206ENST00000446987 TEFQ10587 303 aa16.21■□□□□ 0.19
DDX56-206ENST00000446987 SKOR2Q2VWA4 1001 aaPredicted RBP16.21■□□□□ 0.19
DDX56-206ENST00000446987 RTF1Q92541 710 aaKnown RBP16.21■□□□□ 0.19
DDX56-206ENST00000446987 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
DDX56-206ENST00000446987 GTPBP4Q9BZE4 634 aaKnown RBP16.21■□□□□ 0.19
DDX56-206ENST00000446987 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
DDX56-206ENST00000446987 LINC00116Q8NCU8 138 aa16.2■□□□□ 0.18
DDX56-206ENST00000446987 TBC1D32Q96NH3 1257 aa16.2■□□□□ 0.18
DDX56-206ENST00000446987 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
DDX56-206ENST00000446987 LAMB4A4D0S4 1761 aa16.2■□□□□ 0.18
DDX56-206ENST00000446987 IBTKQ9P2D0 1353 aaPredicted RBP16.19■□□□□ 0.18
DDX56-206ENST00000446987 PTCD1O75127 700 aaKnown RBP16.19■□□□□ 0.18
DDX56-206ENST00000446987 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
DDX56-206ENST00000446987 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
DDX56-206ENST00000446987 AMIGO3Q86WK7 504 aa16.19■□□□□ 0.18
DDX56-206ENST00000446987 BBXQ8WY36 941 aaPredicted RBP16.19■□□□□ 0.18
DDX56-206ENST00000446987 TBC1D2Q9BYX2 928 aa16.19■□□□□ 0.18
DDX56-206ENST00000446987 ZNF500O60304 480 aaPredicted RBP16.18■□□□□ 0.18
DDX56-206ENST00000446987 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
DDX56-206ENST00000446987 TAF3Q5VWG9 929 aa16.18■□□□□ 0.18
DDX56-206ENST00000446987 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
DDX56-206ENST00000446987 C4AP0C0L4 1744 aa16.18■□□□□ 0.18
DDX56-206ENST00000446987 PSDA5PKW4 1024 aaPredicted RBP16.18■□□□□ 0.18
DDX56-206ENST00000446987 R3HDM1Q15032 1099 aaKnown RBP16.18■□□□□ 0.18
DDX56-206ENST00000446987 IPO4Q8TEX9 1081 aaKnown RBP16.18■□□□□ 0.18
DDX56-206ENST00000446987 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
DDX56-206ENST00000446987 SLC15A2Q16348 729 aa16.17■□□□□ 0.18
DDX56-206ENST00000446987 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
DDX56-206ENST00000446987 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
DDX56-206ENST00000446987 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
DDX56-206ENST00000446987 BTBD11A6QL63 1104 aa16.16■□□□□ 0.18
DDX56-206ENST00000446987 MSNP26038 577 aaKnown RBP16.16■□□□□ 0.18
DDX56-206ENST00000446987 ATP6V1AP38606 617 aa16.16■□□□□ 0.18
DDX56-206ENST00000446987 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms