RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TBC1D9Q6ZT07 1266 aa11.8□□□□□ -0.52
COL6A4P1-201ENST00000446690 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
COL6A4P1-201ENST00000446690 C9orf78Q9NZ63 289 aaPredicted RBP11.8□□□□□ -0.52
COL6A4P1-201ENST00000446690 DDX58O95786 925 aaKnown RBP11.79□□□□□ -0.52
COL6A4P1-201ENST00000446690 IL2RBP14784 551 aa11.79□□□□□ -0.52
COL6A4P1-201ENST00000446690 TTC22Q5TAA0 569 aa11.79□□□□□ -0.52
COL6A4P1-201ENST00000446690 PPP1R42Q7Z4L9 355 aa11.79□□□□□ -0.52
COL6A4P1-201ENST00000446690 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
COL6A4P1-201ENST00000446690 USP16Q9Y5T5 823 aa11.79□□□□□ -0.52
COL6A4P1-201ENST00000446690 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
COL6A4P1-201ENST00000446690 SNRPA1P09661 255 aaKnown RBP11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 CWF19L2Q2TBE0 894 aaKnown RBP11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 RIC3Q7Z5B4 369 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 FMNL2Q96PY5 1086 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 CARD10Q9BWT7 1032 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 COL5A2P05997 1499 aaPredicted RBP11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 CDC45O75419 566 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 PDIA6Q15084 440 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 BTG4Q9NY30 223 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 PCDH11XQ9BZA7 1347 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 PCDH11YQ9BZA8 1340 aa11.78□□□□□ -0.52
COL6A4P1-201ENST00000446690 CRYBG1Q9Y4K1 1723 aa11.77□□□□□ -0.52
COL6A4P1-201ENST00000446690 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.52
COL6A4P1-201ENST00000446690 ABCC6O95255 1503 aa11.77□□□□□ -0.53
COL6A4P1-201ENST00000446690 TSHZ3Q63HK5 1081 aa11.77□□□□□ -0.53
COL6A4P1-201ENST00000446690 COPS6Q7L5N1 327 aa11.77□□□□□ -0.53
COL6A4P1-201ENST00000446690 XAGE3Q8WTP9 111 aa11.77□□□□□ -0.53
COL6A4P1-201ENST00000446690 SDSP20132 328 aa11.76□□□□□ -0.53
COL6A4P1-201ENST00000446690 PDE1AP54750 535 aa11.76□□□□□ -0.53
COL6A4P1-201ENST00000446690 SSH3Q8TE77 659 aa11.76□□□□□ -0.53
COL6A4P1-201ENST00000446690 IL1RAPL2Q9NP60 686 aa11.76□□□□□ -0.53
COL6A4P1-201ENST00000446690 ALDH1L1O75891 902 aa11.75□□□□□ -0.53
COL6A4P1-201ENST00000446690 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
COL6A4P1-201ENST00000446690 SPRYD3Q8NCJ5 442 aa11.75□□□□□ -0.53
COL6A4P1-201ENST00000446690 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
COL6A4P1-201ENST00000446690 IBTKQ9P2D0 1353 aaPredicted RBP11.75□□□□□ -0.53
COL6A4P1-201ENST00000446690 NEXNQ0ZGT2 675 aa11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 OS9Q13438 667 aaPredicted RBP11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 RTL5Q5HYW3 569 aaPredicted RBP11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 LINS1Q8NG48 757 aa11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 CACNA1FO60840 1977 aa11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 MX1P20591 662 aa11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 POLA2Q14181 598 aa11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 CASC1Q6TDU7 716 aa11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 MYD88Q99836 296 aa11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 SLKQ9H2G2 1235 aaPredicted RBP11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
COL6A4P1-201ENST00000446690 ADAMTS7Q9UKP4 1686 aa11.73□□□□□ -0.53
COL6A4P1-201ENST00000446690 PLEKHG2Q9H7P9 1386 aa11.73□□□□□ -0.53
COL6A4P1-201ENST00000446690 SIPA1L3O60292 1781 aaPredicted RBP11.73□□□□□ -0.53
COL6A4P1-201ENST00000446690 GRM8O00222 908 aa11.73□□□□□ -0.53
COL6A4P1-201ENST00000446690 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
COL6A4P1-201ENST00000446690 SCN11AQ9UI33 1791 aa11.73□□□□□ -0.53
COL6A4P1-201ENST00000446690 TRIM6-TRIM34B2RNG4 842 aa11.72□□□□□ -0.53
COL6A4P1-201ENST00000446690 RAB11FIP3O75154 756 aa11.72□□□□□ -0.53
COL6A4P1-201ENST00000446690 RBM25P49756 843 aaKnown RBP11.72□□□□□ -0.53
COL6A4P1-201ENST00000446690 RILPL2Q969X0 211 aa11.72□□□□□ -0.53
COL6A4P1-201ENST00000446690 IGKV5-2P06315 115 aa11.72□□□□□ -0.53
COL6A4P1-201ENST00000446690 RHPN1Q8TCX5 695 aa11.72□□□□□ -0.53
COL6A4P1-201ENST00000446690 JARID2Q92833 1246 aaPredicted RBP11.72□□□□□ -0.53
COL6A4P1-201ENST00000446690 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
COL6A4P1-201ENST00000446690 HDAC5Q9UQL6 1122 aa11.72□□□□□ -0.53
COL6A4P1-201ENST00000446690 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
COL6A4P1-201ENST00000446690 SUCLG2Q96I99 432 aa11.71□□□□□ -0.53
COL6A4P1-201ENST00000446690 METTL22Q9BUU2 404 aaPredicted RBP11.71□□□□□ -0.53
COL6A4P1-201ENST00000446690 NEURL1BA8MQ27 555 aa11.71□□□□□ -0.54
COL6A4P1-201ENST00000446690 ADAMTS2O95450 1211 aa11.71□□□□□ -0.54
COL6A4P1-201ENST00000446690 KIF1BPQ96EK5 621 aa11.71□□□□□ -0.54
COL6A4P1-201ENST00000446690 BICC1Q9H694 974 aaKnown RBP11.71□□□□□ -0.54
COL6A4P1-201ENST00000446690 TMOD3Q9NYL9 352 aa11.71□□□□□ -0.54
COL6A4P1-201ENST00000446690 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.54
COL6A4P1-201ENST00000446690 MRC1P22897 1456 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 ATP5J2-PTCD1G3V325 749 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 A1BGP04217 495 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 PIP4K2BP78356 416 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 HSCBQ8IWL3 235 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 PKD1L3Q7Z443 1732 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 NHSL1Q5SYE7 1610 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 GCKRQ14397 625 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 LRP10Q7Z4F1 713 aa11.7□□□□□ -0.54
COL6A4P1-201ENST00000446690 SALL3Q9BXA9 1300 aa11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 MAP4K4O95819 1239 aaPredicted RBP11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 EIF5BO60841 1220 aaKnown RBP11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 NBPF14Q5TI25 921 aa11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 NBPF10Q6P3W6 841 aaKnown RBP11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 NBPF15Q8N660 670 aa11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 KAZALD1Q96I82 304 aa11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 ZNF330Q9Y3S2 320 aaPredicted RBP11.69□□□□□ -0.54
COL6A4P1-201ENST00000446690 C5P01031 1676 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 ABCA3Q99758 1704 aa11.68□□□□□ -0.54
COL6A4P1-201ENST00000446690 PARP4Q9UKK3 1724 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms