RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 INTS4Q96HW7 963 aaKnown RBP17.15■□□□□ 0.34
ERCC3-203ENST00000445889 KCNQ3O43525 872 aa17.15■□□□□ 0.34
ERCC3-203ENST00000445889 CCDC83Q8IWF9 413 aa17.15■□□□□ 0.34
ERCC3-203ENST00000445889 SYAP1Q96A49 352 aaPredicted RBP17.15■□□□□ 0.34
ERCC3-203ENST00000445889 RIMS1Q86UR5 1692 aaKnown RBP17.15■□□□□ 0.34
ERCC3-203ENST00000445889 WDR33Q9C0J8 1336 aaKnown RBP17.15■□□□□ 0.34
ERCC3-203ENST00000445889 ADCY5O95622 1261 aa17.14■□□□□ 0.33
ERCC3-203ENST00000445889 CASTP20810 708 aaKnown RBP17.14■□□□□ 0.33
ERCC3-203ENST00000445889 OS9Q13438 667 aaPredicted RBP17.14■□□□□ 0.33
ERCC3-203ENST00000445889 ANAPC15P60006 121 aa17.14■□□□□ 0.33
ERCC3-203ENST00000445889 TAF7Q15545 349 aaPredicted RBP17.14■□□□□ 0.33
ERCC3-203ENST00000445889 ADCK5Q3MIX3 580 aa17.14■□□□□ 0.33
ERCC3-203ENST00000445889 FAM173BQ6P4H8 233 aa17.14■□□□□ 0.33
ERCC3-203ENST00000445889 STAP2Q9UGK3 403 aa17.14■□□□□ 0.33
ERCC3-203ENST00000445889 NECAB1Q8N987 351 aa17.14■□□□□ 0.33
ERCC3-203ENST00000445889 PI4K2BQ8TCG2 481 aa17.14■□□□□ 0.33
ERCC3-203ENST00000445889 RBM33Q96EV2 1170 aaKnown RBP17.14■□□□□ 0.33
ERCC3-203ENST00000445889 RIMBP3CA6NJZ7 1639 aa17.13■□□□□ 0.33
ERCC3-203ENST00000445889 RIMBP3BA6NNM3 1639 aa17.13■□□□□ 0.33
ERCC3-203ENST00000445889 RIMBP3Q9UFD9 1639 aa17.13■□□□□ 0.33
ERCC3-203ENST00000445889 KIAA2012Q0VF49 1180 aa17.13■□□□□ 0.33
ERCC3-203ENST00000445889 TCEANC2Q96MN5 208 aa17.13■□□□□ 0.33
ERCC3-203ENST00000445889 PRDM10Q9NQV6 1147 aa17.13■□□□□ 0.33
ERCC3-203ENST00000445889 PTH1RQ03431 593 aa17.13■□□□□ 0.33
ERCC3-203ENST00000445889 DNM1Q05193 864 aaKnown RBP17.13■□□□□ 0.33
ERCC3-203ENST00000445889 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
ERCC3-203ENST00000445889 TCHHQ07283 1943 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 PI4KAP2A4QPH2 592 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 MCM5P33992 734 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 SASS6Q6UVJ0 657 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 PI4KAP1Q8N8J0 262 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 SPC24Q8NBT2 197 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 PA2G4Q9UQ80 394 aaKnown RBP17.12■□□□□ 0.33
ERCC3-203ENST00000445889 OVOS2A0A0J9YW53 1432 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 SGSM2O43147 1006 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 STX6O43752 255 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 USP6P35125 1406 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 OVOS2Q6IE36 1432 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 FERMT3Q86UX7 667 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 LGR6Q9HBX8 967 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 SMC3Q9UQE7 1217 aa17.12■□□□□ 0.33
ERCC3-203ENST00000445889 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
ERCC3-203ENST00000445889 ZSCAN22P10073 491 aaPredicted RBP17.11■□□□□ 0.33
ERCC3-203ENST00000445889 PRPF40BQ6NWY9 871 aaKnown RBP17.11■□□□□ 0.33
ERCC3-203ENST00000445889 CEP170BQ9Y4F5 1589 aaPredicted RBP17.11■□□□□ 0.33
ERCC3-203ENST00000445889 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
ERCC3-203ENST00000445889 CHPF2Q9P2E5 772 aa17.11■□□□□ 0.33
ERCC3-203ENST00000445889 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
ERCC3-203ENST00000445889 AP5Z1O43299 807 aa17.1■□□□□ 0.33
ERCC3-203ENST00000445889 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
ERCC3-203ENST00000445889 DYNC1I1O14576 645 aa17.1■□□□□ 0.33
ERCC3-203ENST00000445889 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
ERCC3-203ENST00000445889 CAMK4Q16566 473 aa17.1■□□□□ 0.33
ERCC3-203ENST00000445889 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
ERCC3-203ENST00000445889 AMOTL2Q9Y2J4 779 aa17.1■□□□□ 0.33
ERCC3-203ENST00000445889 PEAK1Q9H792 1746 aa17.1■□□□□ 0.33
ERCC3-203ENST00000445889 PHF14O94880 888 aa17.09■□□□□ 0.33
ERCC3-203ENST00000445889 GJB2P29033 226 aa17.09■□□□□ 0.33
ERCC3-203ENST00000445889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.09■□□□□ 0.33
ERCC3-203ENST00000445889 TTC14Q96N46 770 aa17.09■□□□□ 0.33
ERCC3-203ENST00000445889 LIMCH1Q9UPQ0 1083 aa17.09■□□□□ 0.33
ERCC3-203ENST00000445889 RAD50Q92878 1312 aa17.08■□□□□ 0.33
ERCC3-203ENST00000445889 NOLC1Q14978 699 aaKnown RBP eCLIP17.08■□□□□ 0.33
ERCC3-203ENST00000445889 CCDC183Q5T5S1 534 aa17.08■□□□□ 0.33
ERCC3-203ENST00000445889 FLT4P35916 1363 aa17.08■□□□□ 0.32
ERCC3-203ENST00000445889 IGSF1Q8N6C5 1336 aa17.08■□□□□ 0.32
ERCC3-203ENST00000445889 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.08■□□□□ 0.32
ERCC3-203ENST00000445889 F13A1P00488 732 aa17.07■□□□□ 0.32
ERCC3-203ENST00000445889 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
ERCC3-203ENST00000445889 DIAPH3Q9NSV4 1193 aa17.07■□□□□ 0.32
ERCC3-203ENST00000445889 HOXC9P31274 260 aa17.07■□□□□ 0.32
ERCC3-203ENST00000445889 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
ERCC3-203ENST00000445889 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
ERCC3-203ENST00000445889 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
ERCC3-203ENST00000445889 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
ERCC3-203ENST00000445889 C3P01024 1663 aa17.06■□□□□ 0.32
ERCC3-203ENST00000445889 MAP7D2Q96T17 732 aa17.06■□□□□ 0.32
ERCC3-203ENST00000445889 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
ERCC3-203ENST00000445889 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
ERCC3-203ENST00000445889 PRAMEF22A3QJZ6 481 aa17.05■□□□□ 0.32
ERCC3-203ENST00000445889 KCNJ4P48050 445 aa17.05■□□□□ 0.32
ERCC3-203ENST00000445889 UBE2HP62256 183 aa17.05■□□□□ 0.32
ERCC3-203ENST00000445889 PDRG1Q9NUG6 133 aa17.05■□□□□ 0.32
ERCC3-203ENST00000445889 TSPOAP1O95153 1857 aa17.05■□□□□ 0.32
ERCC3-203ENST00000445889 USP31Q70CQ4 1352 aa17.05■□□□□ 0.32
ERCC3-203ENST00000445889 CWF19L2Q2TBE0 894 aaKnown RBP17.05■□□□□ 0.32
ERCC3-203ENST00000445889 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
ERCC3-203ENST00000445889 TAF6LQ9Y6J9 622 aa17.05■□□□□ 0.32
ERCC3-203ENST00000445889 SETD1AO15047 1707 aaKnown RBP17.04■□□□□ 0.32
ERCC3-203ENST00000445889 ME3Q16798 604 aa17.04■□□□□ 0.32
ERCC3-203ENST00000445889 MPRIPQ6WCQ1 1025 aa17.04■□□□□ 0.32
ERCC3-203ENST00000445889 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
ERCC3-203ENST00000445889 TFIP11Q9UBB9 837 aaKnown RBP17.04■□□□□ 0.32
ERCC3-203ENST00000445889 STK3Q13188 491 aa17.04■□□□□ 0.32
ERCC3-203ENST00000445889 CCDC8Q9H0W5 538 aaPredicted RBP17.04■□□□□ 0.32
ERCC3-203ENST00000445889 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.04■□□□□ 0.32
ERCC3-203ENST00000445889 KDM4AO75164 1064 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 ST3GAL1Q11201 340 aa17.03■□□□□ 0.32
ERCC3-203ENST00000445889 POLA2Q14181 598 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms