RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 GNAT3A8MTJ3 354 aa20.78■□□□□ 0.92
SEC13-213ENST00000445064 KIF3CO14782 793 aa20.78■□□□□ 0.92
SEC13-213ENST00000445064 CANXP27824 592 aaKnown RBP20.78■□□□□ 0.92
SEC13-213ENST00000445064 TTC5Q8N0Z6 440 aa20.78■□□□□ 0.92
SEC13-213ENST00000445064 TEFQ10587 303 aa20.77■□□□□ 0.92
SEC13-213ENST00000445064 NFIXQ14938 502 aa20.77■□□□□ 0.92
SEC13-213ENST00000445064 GAS2L2Q8NHY3 880 aa20.77■□□□□ 0.92
SEC13-213ENST00000445064 BRCA1P38398 1863 aaKnown RBP20.77■□□□□ 0.92
SEC13-213ENST00000445064 COL15A1P39059 1388 aa20.76■□□□□ 0.91
SEC13-213ENST00000445064 DALRD3Q5D0E6 543 aaKnown RBP20.76■□□□□ 0.91
SEC13-213ENST00000445064 BCL2L12Q9HB09 334 aa20.76■□□□□ 0.91
SEC13-213ENST00000445064 ZNF496Q96IT1 587 aaPredicted RBP20.75■□□□□ 0.91
SEC13-213ENST00000445064 PHACTR3Q96KR7 559 aa20.75■□□□□ 0.91
SEC13-213ENST00000445064 STARD3NLO95772 234 aa20.74■□□□□ 0.91
SEC13-213ENST00000445064 SERPINB2P05120 415 aa20.74■□□□□ 0.91
SEC13-213ENST00000445064 HSPA6P17066 643 aa20.74■□□□□ 0.91
SEC13-213ENST00000445064 C9orf131Q5VYM1 1079 aa20.74■□□□□ 0.91
SEC13-213ENST00000445064 ZNF790Q6PG37 636 aa20.74■□□□□ 0.91
SEC13-213ENST00000445064 CFAP53Q96M91 514 aa20.73■□□□□ 0.91
SEC13-213ENST00000445064 UBR2Q8IWV8 1755 aa20.72■□□□□ 0.91
SEC13-213ENST00000445064 PRKAR2BP31323 418 aa20.72■□□□□ 0.91
SEC13-213ENST00000445064 EIF5P55010 431 aaKnown RBP20.72■□□□□ 0.91
SEC13-213ENST00000445064 BICDL1Q6ZP65 573 aa20.72■□□□□ 0.91
SEC13-213ENST00000445064 HEG1Q9ULI3 1381 aa20.72■□□□□ 0.91
SEC13-213ENST00000445064 ARFGEF1Q9Y6D6 1849 aa20.71■□□□□ 0.91
SEC13-213ENST00000445064 RSPH6AQ9H0K4 717 aa20.71■□□□□ 0.91
SEC13-213ENST00000445064 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
SEC13-213ENST00000445064 NMRK2Q9NPI5 230 aa20.7■□□□□ 0.9
SEC13-213ENST00000445064 ZNF330Q9Y3S2 320 aaPredicted RBP20.7■□□□□ 0.9
SEC13-213ENST00000445064 AFDNP55196 1824 aaKnown RBP20.69■□□□□ 0.9
SEC13-213ENST00000445064 A0A087WZG4 1122 aa20.69■□□□□ 0.9
SEC13-213ENST00000445064 KCNQ3O43525 872 aa20.69■□□□□ 0.9
SEC13-213ENST00000445064 PPP2R1AP30153 589 aa20.69■□□□□ 0.9
SEC13-213ENST00000445064 TBC1D2BQ9UPU7 963 aa20.69■□□□□ 0.9
SEC13-213ENST00000445064 NUDCQ9Y266 331 aa20.69■□□□□ 0.9
SEC13-213ENST00000445064 BTBD11A6QL63 1104 aa20.68■□□□□ 0.9
SEC13-213ENST00000445064 FMNL2Q96PY5 1086 aa20.68■□□□□ 0.9
SEC13-213ENST00000445064 RNF181Q9P0P0 153 aa20.68■□□□□ 0.9
SEC13-213ENST00000445064 TOMM70O94826 608 aa20.67■□□□□ 0.9
SEC13-213ENST00000445064 A1BGP04217 495 aa20.67■□□□□ 0.9
SEC13-213ENST00000445064 U2AF1L5P0DN76 240 aaPredicted RBP20.67■□□□□ 0.9
SEC13-213ENST00000445064 U2AF1Q01081 240 aaKnown RBP eCLIP20.67■□□□□ 0.9
SEC13-213ENST00000445064 TBC1D9BQ66K14 1250 aa20.67■□□□□ 0.9
SEC13-213ENST00000445064 CEMIPQ8WUJ3 1361 aa20.67■□□□□ 0.9
SEC13-213ENST00000445064 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
SEC13-213ENST00000445064 NRXN2Q9P2S2 1712 aa20.66■□□□□ 0.9
SEC13-213ENST00000445064 IL6STP40189 918 aaPredicted RBP20.65■□□□□ 0.9
SEC13-213ENST00000445064 C2CD5Q86YS7 1000 aa20.65■□□□□ 0.9
SEC13-213ENST00000445064 CARMIL3Q8ND23 1372 aa20.64■□□□□ 0.89
SEC13-213ENST00000445064 H0YIN7 160 aa20.64■□□□□ 0.89
SEC13-213ENST00000445064 RASSF7Q02833 373 aa20.64■□□□□ 0.89
SEC13-213ENST00000445064 MCM10Q7L590 875 aa20.64■□□□□ 0.89
SEC13-213ENST00000445064 CCDC24Q8N4L8 307 aa20.64■□□□□ 0.89
SEC13-213ENST00000445064 TTLL6Q8N841 843 aa20.64■□□□□ 0.89
SEC13-213ENST00000445064 USP16Q9Y5T5 823 aa20.64■□□□□ 0.89
SEC13-213ENST00000445064 RTF1Q92541 710 aaKnown RBP20.63■□□□□ 0.89
SEC13-213ENST00000445064 PRAMEF22A3QJZ6 481 aa20.62■□□□□ 0.89
SEC13-213ENST00000445064 PIP4K2AP48426 406 aaPredicted RBP20.62■□□□□ 0.89
SEC13-213ENST00000445064 DCTN1Q14203 1278 aa20.62■□□□□ 0.89
SEC13-213ENST00000445064 NPM2Q86SE8 214 aaKnown RBP20.62■□□□□ 0.89
SEC13-213ENST00000445064 RRAGCQ9HB90 399 aa20.62■□□□□ 0.89
SEC13-213ENST00000445064 KDM2BQ8NHM5 1336 aa20.61■□□□□ 0.89
SEC13-213ENST00000445064 SBF1O95248 1867 aa20.61■□□□□ 0.89
SEC13-213ENST00000445064 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
SEC13-213ENST00000445064 CAMTA2O94983 1202 aa20.6■□□□□ 0.89
SEC13-213ENST00000445064 PRR5LQ6MZQ0 368 aa20.6■□□□□ 0.89
SEC13-213ENST00000445064 ZNF622Q969S3 477 aaKnown RBP eCLIP20.6■□□□□ 0.89
SEC13-213ENST00000445064 CEP350Q5VT06 3117 aa20.6■□□□□ 0.89
SEC13-213ENST00000445064 PRELPP51888 382 aa20.59■□□□□ 0.89
SEC13-213ENST00000445064 DZIP3Q86Y13 1208 aaKnown RBP20.59■□□□□ 0.89
SEC13-213ENST00000445064 SETDB2Q96T68 719 aa20.59■□□□□ 0.89
SEC13-213ENST00000445064 BRIP1Q9BX63 1249 aa20.59■□□□□ 0.89
SEC13-213ENST00000445064 LMNB1P20700 586 aa20.58■□□□□ 0.89
SEC13-213ENST00000445064 PDE6BP35913 854 aa20.58■□□□□ 0.89
SEC13-213ENST00000445064 APLP1P51693 650 aa20.58■□□□□ 0.89
SEC13-213ENST00000445064 ZNF219Q9P2Y4 722 aaPredicted RBP20.58■□□□□ 0.89
SEC13-213ENST00000445064 DLEC1Q9Y238 1755 aa20.57■□□□□ 0.88
SEC13-213ENST00000445064 SNRPA1P09661 255 aaKnown RBP20.57■□□□□ 0.88
SEC13-213ENST00000445064 RBM46Q8TBY0 533 aaKnown RBP20.57■□□□□ 0.88
SEC13-213ENST00000445064 NPHP1O15259 732 aa20.56■□□□□ 0.88
SEC13-213ENST00000445064 HTATSF1O43719 755 aaKnown RBP20.56■□□□□ 0.88
SEC13-213ENST00000445064 SCN7AQ01118 1682 aa20.56■□□□□ 0.88
SEC13-213ENST00000445064 NFKBIEO00221 500 aa20.55■□□□□ 0.88
SEC13-213ENST00000445064 C21orf2O43822 256 aa20.55■□□□□ 0.88
SEC13-213ENST00000445064 TAF7Q15545 349 aaPredicted RBP20.55■□□□□ 0.88
SEC13-213ENST00000445064 MIS18AQ9NYP9 233 aa20.55■□□□□ 0.88
SEC13-213ENST00000445064 PDZRN3Q9UPQ7 1066 aa20.55■□□□□ 0.88
SEC13-213ENST00000445064 ANKRD31Q8N7Z5 1873 aa20.55■□□□□ 0.88
SEC13-213ENST00000445064 DNAJC5GQ8N7S2 189 aa20.54■□□□□ 0.88
SEC13-213ENST00000445064 CNBD1Q8NA66 436 aa20.54■□□□□ 0.88
SEC13-213ENST00000445064 NBPF26B4DH59 902 aa20.53■□□□□ 0.88
SEC13-213ENST00000445064 NBPF10Q6P3W6 841 aaKnown RBP20.53■□□□□ 0.88
SEC13-213ENST00000445064 NBPF15Q8N660 670 aa20.53■□□□□ 0.88
SEC13-213ENST00000445064 GLTPD2A6NH11 291 aa20.52■□□□□ 0.88
SEC13-213ENST00000445064 ST5P78524 1137 aa20.52■□□□□ 0.88
SEC13-213ENST00000445064 FSTL1Q12841 308 aa20.52■□□□□ 0.88
SEC13-213ENST00000445064 NEFMP07197 916 aa20.51■□□□□ 0.87
SEC13-213ENST00000445064 HTRA3P83110 453 aa20.51■□□□□ 0.87
SEC13-213ENST00000445064 CLEC4GQ6UXB4 293 aa20.51■□□□□ 0.87
SEC13-213ENST00000445064 CCDC88AQ3V6T2 1871 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms