RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
LINC00642-203ENST00000444942 FER1L6Q2WGJ9 1857 aa12.6□□□□□ -0.39
LINC00642-203ENST00000444942 ADAMTSL1Q8N6G6 1762 aa12.6□□□□□ -0.39
LINC00642-203ENST00000444942 NFKBIEO00221 500 aa12.59□□□□□ -0.39
LINC00642-203ENST00000444942 ADRA2BP18089 450 aa12.59□□□□□ -0.39
LINC00642-203ENST00000444942 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
LINC00642-203ENST00000444942 MYH14Q7Z406 1995 aaKnown RBP12.59□□□□□ -0.39
LINC00642-203ENST00000444942 DGKZQ13574 1117 aa12.58□□□□□ -0.4
LINC00642-203ENST00000444942 GCC1Q96CN9 775 aa12.58□□□□□ -0.4
LINC00642-203ENST00000444942 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
LINC00642-203ENST00000444942 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
LINC00642-203ENST00000444942 HOXC9P31274 260 aa12.57□□□□□ -0.4
LINC00642-203ENST00000444942 RFC4P35249 363 aa12.57□□□□□ -0.4
LINC00642-203ENST00000444942 CC2D1BQ5T0F9 858 aaKnown RBP12.57□□□□□ -0.4
LINC00642-203ENST00000444942 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
LINC00642-203ENST00000444942 EMILIN1Q9Y6C2 1016 aa12.57□□□□□ -0.4
LINC00642-203ENST00000444942 CYP27B1O15528 508 aa12.56□□□□□ -0.4
LINC00642-203ENST00000444942 SOX10P56693 466 aa12.56□□□□□ -0.4
LINC00642-203ENST00000444942 DDR1Q08345 913 aa12.56□□□□□ -0.4
LINC00642-203ENST00000444942 MORC1Q86VD1 984 aa12.56□□□□□ -0.4
LINC00642-203ENST00000444942 DDNO94850 711 aaPredicted RBP12.56□□□□□ -0.4
LINC00642-203ENST00000444942 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
LINC00642-203ENST00000444942 NBPF6Q5VWK0 638 aa12.56□□□□□ -0.4
LINC00642-203ENST00000444942 MIER1Q8N108 512 aa12.56□□□□□ -0.4
LINC00642-203ENST00000444942 NBPF4Q96M43 638 aa12.56□□□□□ -0.4
LINC00642-203ENST00000444942 IQCA1LA6NCM1 817 aa12.55□□□□□ -0.4
LINC00642-203ENST00000444942 ERFEQ4G0M1 354 aa12.55□□□□□ -0.4
LINC00642-203ENST00000444942 HSP90AB2PQ58FF8 381 aa12.55□□□□□ -0.4
LINC00642-203ENST00000444942 CAPNS2Q96L46 248 aa12.55□□□□□ -0.4
LINC00642-203ENST00000444942 TAF1DQ9H5J8 278 aaPredicted RBP12.55□□□□□ -0.4
LINC00642-203ENST00000444942 ABT1Q9ULW3 272 aaKnown RBP12.55□□□□□ -0.4
LINC00642-203ENST00000444942 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
LINC00642-203ENST00000444942 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
LINC00642-203ENST00000444942 TRPM7Q96QT4 1865 aa12.54□□□□□ -0.4
LINC00642-203ENST00000444942 ECE1P42892 770 aa12.54□□□□□ -0.4
LINC00642-203ENST00000444942 HABP4Q5JVS0 413 aaKnown RBP12.54□□□□□ -0.4
LINC00642-203ENST00000444942 RC3H1Q5TC82 1133 aaKnown RBP12.54□□□□□ -0.4
LINC00642-203ENST00000444942 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
LINC00642-203ENST00000444942 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
LINC00642-203ENST00000444942 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
LINC00642-203ENST00000444942 ASAP1Q9ULH1 1129 aa12.54□□□□□ -0.4
LINC00642-203ENST00000444942 KDRP35968 1356 aa12.54□□□□□ -0.4
LINC00642-203ENST00000444942 CUL9Q8IWT3 2517 aa12.53□□□□□ -0.4
LINC00642-203ENST00000444942 PER1O15534 1290 aaPredicted RBP12.53□□□□□ -0.4
LINC00642-203ENST00000444942 CA12O43570 354 aa12.53□□□□□ -0.4
LINC00642-203ENST00000444942 RPS6KA4O75676 772 aa12.53□□□□□ -0.4
LINC00642-203ENST00000444942 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
LINC00642-203ENST00000444942 TTLL6Q8N841 843 aa12.53□□□□□ -0.4
LINC00642-203ENST00000444942 CNTNAP4Q9C0A0 1308 aa12.52□□□□□ -0.41
LINC00642-203ENST00000444942 FKBP8Q14318 412 aa12.52□□□□□ -0.41
LINC00642-203ENST00000444942 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.41
LINC00642-203ENST00000444942 POLKQ9UBT6 870 aa12.52□□□□□ -0.41
LINC00642-203ENST00000444942 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
LINC00642-203ENST00000444942 FLT4P35916 1363 aa12.51□□□□□ -0.41
LINC00642-203ENST00000444942 POLRMTO00411 1230 aaKnown RBP12.51□□□□□ -0.41
LINC00642-203ENST00000444942 DDX10Q13206 875 aaKnown RBP12.51□□□□□ -0.41
LINC00642-203ENST00000444942 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
LINC00642-203ENST00000444942 ADAMTS7Q9UKP4 1686 aa12.5□□□□□ -0.41
LINC00642-203ENST00000444942 CENPBP07199 599 aaPredicted RBP12.5□□□□□ -0.41
LINC00642-203ENST00000444942 MAP2K2P36507 400 aa12.5□□□□□ -0.41
LINC00642-203ENST00000444942 EAPPQ56P03 285 aaPredicted RBP12.5□□□□□ -0.41
LINC00642-203ENST00000444942 CYP4F22Q6NT55 531 aa12.5□□□□□ -0.41
LINC00642-203ENST00000444942 PAXIP1Q6ZW49 1069 aaPredicted RBP12.5□□□□□ -0.41
LINC00642-203ENST00000444942 CNTROBQ8N137 903 aa12.5□□□□□ -0.41
LINC00642-203ENST00000444942 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
LINC00642-203ENST00000444942 INSRP06213 1382 aa12.49□□□□□ -0.41
LINC00642-203ENST00000444942 USP42Q9H9J4 1324 aaKnown RBP12.49□□□□□ -0.41
LINC00642-203ENST00000444942 DLL1O00548 723 aa12.49□□□□□ -0.41
LINC00642-203ENST00000444942 TM4SF1P30408 202 aa12.49□□□□□ -0.41
LINC00642-203ENST00000444942 GRM1Q13255 1194 aa12.49□□□□□ -0.41
LINC00642-203ENST00000444942 SLC4A9Q96Q91 983 aa12.49□□□□□ -0.41
LINC00642-203ENST00000444942 ATG3Q9NT62 314 aa12.49□□□□□ -0.41
LINC00642-203ENST00000444942 SRP68Q9UHB9 627 aaKnown RBP12.49□□□□□ -0.41
LINC00642-203ENST00000444942 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
LINC00642-203ENST00000444942 MAP1SQ66K74 1059 aaPredicted RBP12.48□□□□□ -0.41
LINC00642-203ENST00000444942 LTBP3Q9NS15 1303 aa12.47□□□□□ -0.41
LINC00642-203ENST00000444942 CACNA1SQ13698 1873 aa12.47□□□□□ -0.41
LINC00642-203ENST00000444942 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
LINC00642-203ENST00000444942 DDX21Q9NR30 783 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC00642-203ENST00000444942 AOC2O75106 756 aa12.46□□□□□ -0.41
LINC00642-203ENST00000444942 MTHFSP49914 203 aa12.46□□□□□ -0.41
LINC00642-203ENST00000444942 EPHX2P34913 555 aa12.45□□□□□ -0.42
LINC00642-203ENST00000444942 FXR1P51114 621 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00642-203ENST00000444942 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
LINC00642-203ENST00000444942 PNMA8AQ86V59 439 aaPredicted RBP12.45□□□□□ -0.42
LINC00642-203ENST00000444942 ANKRD31Q8N7Z5 1873 aa12.45□□□□□ -0.42
LINC00642-203ENST00000444942 HACL1Q9UJ83 578 aa12.45□□□□□ -0.42
LINC00642-203ENST00000444942 KIF24Q5T7B8 1368 aa12.45□□□□□ -0.42
LINC00642-203ENST00000444942 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
LINC00642-203ENST00000444942 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
LINC00642-203ENST00000444942 COL11A2P13942 1736 aaPredicted RBP12.44□□□□□ -0.42
LINC00642-203ENST00000444942 ARFGEF2Q9Y6D5 1785 aa12.44□□□□□ -0.42
LINC00642-203ENST00000444942 H0YIN7 160 aa12.43□□□□□ -0.42
LINC00642-203ENST00000444942 C21orf2O43822 256 aa12.43□□□□□ -0.42
LINC00642-203ENST00000444942 EYA1Q99502 592 aa12.43□□□□□ -0.42
LINC00642-203ENST00000444942 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
LINC00642-203ENST00000444942 TAOK3Q9H2K8 898 aa12.43□□□□□ -0.42
LINC00642-203ENST00000444942 TLL2Q9Y6L7 1015 aa12.43□□□□□ -0.42
LINC00642-203ENST00000444942 SLX4Q8IY92 1834 aa12.42□□□□□ -0.42
LINC00642-203ENST00000444942 NPC1L1Q9UHC9 1359 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms