RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 CABP4P57796 275 aa23.44■■□□□ 1.34
SEMA3D-202ENST00000444867 KSR2Q6VAB6 950 aa23.44■■□□□ 1.34
SEMA3D-202ENST00000444867 ALDH1L1O75891 902 aa23.44■■□□□ 1.34
SEMA3D-202ENST00000444867 DDX58O95786 925 aaKnown RBP23.44■■□□□ 1.34
SEMA3D-202ENST00000444867 SLC39A6Q13433 755 aa23.44■■□□□ 1.34
SEMA3D-202ENST00000444867 NKX1-1Q15270 411 aaPredicted RBP23.44■■□□□ 1.34
SEMA3D-202ENST00000444867 PLEKHM2Q8IWE5 1019 aa23.44■■□□□ 1.34
SEMA3D-202ENST00000444867 PHLPP1O60346 1717 aa23.44■■□□□ 1.34
SEMA3D-202ENST00000444867 IBTKQ9P2D0 1353 aaPredicted RBP23.43■■□□□ 1.34
SEMA3D-202ENST00000444867 UBR2Q8IWV8 1755 aa23.43■■□□□ 1.34
SEMA3D-202ENST00000444867 PAPPAQ13219 1627 aa23.43■■□□□ 1.34
SEMA3D-202ENST00000444867 ERVV-2B6SEH9 535 aa23.43■■□□□ 1.34
SEMA3D-202ENST00000444867 SNRPA1P09661 255 aaKnown RBP23.43■■□□□ 1.34
SEMA3D-202ENST00000444867 FMNL2Q96PY5 1086 aa23.43■■□□□ 1.34
SEMA3D-202ENST00000444867 LRRFIP2Q9Y608 721 aaKnown RBP23.43■■□□□ 1.34
SEMA3D-202ENST00000444867 EIF5BO60841 1220 aaKnown RBP23.42■■□□□ 1.34
SEMA3D-202ENST00000444867 ANXA1P04083 346 aa23.42■■□□□ 1.34
SEMA3D-202ENST00000444867 PRAMEF22A3QJZ6 481 aa23.41■■□□□ 1.34
SEMA3D-202ENST00000444867 DAXXQ9UER7 740 aaPredicted RBP23.41■■□□□ 1.34
SEMA3D-202ENST00000444867 HDAC5Q9UQL6 1122 aa23.41■■□□□ 1.34
SEMA3D-202ENST00000444867 GLI3P10071 1580 aa23.41■■□□□ 1.34
SEMA3D-202ENST00000444867 PDIA6Q15084 440 aa23.41■■□□□ 1.34
SEMA3D-202ENST00000444867 PROSER3Q2NL68 480 aa23.41■■□□□ 1.34
SEMA3D-202ENST00000444867 LARP1Q6PKG0 1096 aaKnown RBP23.41■■□□□ 1.34
SEMA3D-202ENST00000444867 ZNF496Q96IT1 587 aaPredicted RBP23.41■■□□□ 1.34
SEMA3D-202ENST00000444867 STRN4Q9NRL3 753 aa23.41■■□□□ 1.34
SEMA3D-202ENST00000444867 MAP3K2Q9Y2U5 619 aa23.4■■□□□ 1.34
SEMA3D-202ENST00000444867 HSPA1LP34931 641 aa23.39■■□□□ 1.33
SEMA3D-202ENST00000444867 ILDR1Q86SU0 546 aaPredicted RBP23.39■■□□□ 1.33
SEMA3D-202ENST00000444867 SSH3Q8TE77 659 aa23.39■■□□□ 1.33
SEMA3D-202ENST00000444867 PLCH1Q4KWH8 1693 aa23.39■■□□□ 1.33
SEMA3D-202ENST00000444867 PNMA6EA0A0J9YXQ4 647 aa23.38■■□□□ 1.33
SEMA3D-202ENST00000444867 TTC22Q5TAA0 569 aa23.38■■□□□ 1.33
SEMA3D-202ENST00000444867 COL16A1Q07092 1604 aaPredicted RBP23.38■■□□□ 1.33
SEMA3D-202ENST00000444867 LINS1Q8NG48 757 aa23.37■■□□□ 1.33
SEMA3D-202ENST00000444867 ERBB4Q15303 1308 aa23.36■■□□□ 1.33
SEMA3D-202ENST00000444867 CDC45O75419 566 aa23.36■■□□□ 1.33
SEMA3D-202ENST00000444867 MFAP1P55081 439 aaKnown RBP23.36■■□□□ 1.33
SEMA3D-202ENST00000444867 POLA2Q14181 598 aa23.36■■□□□ 1.33
SEMA3D-202ENST00000444867 C22orf23Q9BZE7 217 aa23.36■■□□□ 1.33
SEMA3D-202ENST00000444867 LRRCC1Q9C099 1032 aa23.36■■□□□ 1.33
SEMA3D-202ENST00000444867 OSBPL3Q9H4L5 887 aa23.36■■□□□ 1.33
SEMA3D-202ENST00000444867 SMARCA5O60264 1052 aaPredicted RBP23.35■■□□□ 1.33
SEMA3D-202ENST00000444867 BECN1Q14457 450 aa23.35■■□□□ 1.33
SEMA3D-202ENST00000444867 C16orf71Q8IYS4 520 aaPredicted RBP23.35■■□□□ 1.33
SEMA3D-202ENST00000444867 BTG4Q9NY30 223 aa23.35■■□□□ 1.33
SEMA3D-202ENST00000444867 WNK3Q9BYP7 1800 aa23.35■■□□□ 1.33
SEMA3D-202ENST00000444867 RAB11FIP3O75154 756 aa23.34■■□□□ 1.33
SEMA3D-202ENST00000444867 GSPT1P15170 499 aaKnown RBP23.34■■□□□ 1.33
SEMA3D-202ENST00000444867 TOGARAM1Q9Y4F4 1720 aa23.34■■□□□ 1.33
SEMA3D-202ENST00000444867 NBPF7P0C2Y1 421 aaPredicted RBP23.33■■□□□ 1.33
SEMA3D-202ENST00000444867 EXOC6BQ9Y2D4 811 aa23.33■■□□□ 1.33
SEMA3D-202ENST00000444867 UTYO14607 1347 aa23.33■■□□□ 1.33
SEMA3D-202ENST00000444867 KCPQ6ZWJ8 1503 aa23.33■■□□□ 1.32
SEMA3D-202ENST00000444867 APBB1O00213 710 aa23.33■■□□□ 1.32
SEMA3D-202ENST00000444867 MTX1Q13505 466 aa23.33■■□□□ 1.32
SEMA3D-202ENST00000444867 PPP1R42Q7Z4L9 355 aa23.33■■□□□ 1.32
SEMA3D-202ENST00000444867 DISP2A7MBM2 1401 aa23.32■■□□□ 1.32
SEMA3D-202ENST00000444867 RIC3Q7Z5B4 369 aa23.32■■□□□ 1.32
SEMA3D-202ENST00000444867 C9orf78Q9NZ63 289 aaPredicted RBP23.32■■□□□ 1.32
SEMA3D-202ENST00000444867 USP16Q9Y5T5 823 aa23.32■■□□□ 1.32
SEMA3D-202ENST00000444867 TUBGCP6Q96RT7 1819 aa23.32■■□□□ 1.32
SEMA3D-202ENST00000444867 TNS2Q63HR2 1409 aa23.31■■□□□ 1.32
SEMA3D-202ENST00000444867 TBC1D9Q6ZT07 1266 aa23.31■■□□□ 1.32
SEMA3D-202ENST00000444867 LRP10Q7Z4F1 713 aa23.31■■□□□ 1.32
SEMA3D-202ENST00000444867 ARFGEF2Q9Y6D5 1785 aa23.31■■□□□ 1.32
SEMA3D-202ENST00000444867 RBM25P49756 843 aaKnown RBP23.3■■□□□ 1.32
SEMA3D-202ENST00000444867 NEXNQ0ZGT2 675 aa23.3■■□□□ 1.32
SEMA3D-202ENST00000444867 DDX54Q8TDD1 881 aaKnown RBP23.3■■□□□ 1.32
SEMA3D-202ENST00000444867 OTUD7AQ8TE49 926 aaPredicted RBP23.3■■□□□ 1.32
SEMA3D-202ENST00000444867 XAGE3Q8WTP9 111 aa23.3■■□□□ 1.32
SEMA3D-202ENST00000444867 SALL3Q9BXA9 1300 aa23.3■■□□□ 1.32
SEMA3D-202ENST00000444867 MYL6BP14649 208 aa23.3■■□□□ 1.32
SEMA3D-202ENST00000444867 AIMP1Q12904 312 aaKnown RBP23.3■■□□□ 1.32
SEMA3D-202ENST00000444867 HSP90AB4PQ58FF6 505 aa23.3■■□□□ 1.32
SEMA3D-202ENST00000444867 LRP6O75581 1613 aa23.29■■□□□ 1.32
SEMA3D-202ENST00000444867 SRGAP3O43295 1099 aa23.29■■□□□ 1.32
SEMA3D-202ENST00000444867 PDE1AP54750 535 aa23.29■■□□□ 1.32
SEMA3D-202ENST00000444867 COPS6Q7L5N1 327 aa23.29■■□□□ 1.32
SEMA3D-202ENST00000444867 AFDNP55196 1824 aaKnown RBP23.28■■□□□ 1.32
SEMA3D-202ENST00000444867 GRM8O00222 908 aa23.28■■□□□ 1.32
SEMA3D-202ENST00000444867 METTL22Q9BUU2 404 aaPredicted RBP23.28■■□□□ 1.32
SEMA3D-202ENST00000444867 AOX1Q06278 1338 aa23.28■■□□□ 1.32
SEMA3D-202ENST00000444867 ITGB4P16144 1822 aa23.27■■□□□ 1.32
SEMA3D-202ENST00000444867 CWF19L2Q2TBE0 894 aaKnown RBP23.26■■□□□ 1.31
SEMA3D-202ENST00000444867 ANKRD13DQ6ZTN6 518 aa23.26■■□□□ 1.31
SEMA3D-202ENST00000444867 STAP2Q9UGK3 403 aa23.26■■□□□ 1.31
SEMA3D-202ENST00000444867 NRAPQ86VF7 1730 aa23.26■■□□□ 1.31
SEMA3D-202ENST00000444867 SURF6O75683 361 aaKnown RBP23.26■■□□□ 1.31
SEMA3D-202ENST00000444867 CASC1Q6TDU7 716 aa23.26■■□□□ 1.31
SEMA3D-202ENST00000444867 SDSP20132 328 aa23.25■■□□□ 1.31
SEMA3D-202ENST00000444867 KIF1BPQ96EK5 621 aa23.25■■□□□ 1.31
SEMA3D-202ENST00000444867 NEURL1BA8MQ27 555 aa23.24■■□□□ 1.31
SEMA3D-202ENST00000444867 IGKV5-2P06315 115 aa23.24■■□□□ 1.31
SEMA3D-202ENST00000444867 MX1P20591 662 aa23.24■■□□□ 1.31
SEMA3D-202ENST00000444867 SLC4A3P48751 1232 aa23.24■■□□□ 1.31
SEMA3D-202ENST00000444867 TMOD3Q9NYL9 352 aa23.24■■□□□ 1.31
SEMA3D-202ENST00000444867 USP35Q9P2H5 1018 aa23.23■■□□□ 1.31
SEMA3D-202ENST00000444867 NUP188Q5SRE5 1749 aa23.23■■□□□ 1.31
SEMA3D-202ENST00000444867 PLBD2Q8NHP8 589 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms