RNA–Protein interactions for RNA: ENST00000444724.5

CARF-216, Transcript of calcium responsive transcription factor, humanhuman

TSL 1 (best) BASIC

Gene CARF, Length 2,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-216ENST00000444724 NUDCQ9Y266 331 aa11.55□□□□□ -0.56
CARF-216ENST00000444724 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
CARF-216ENST00000444724 AEBP1Q8IUX7 1158 aa11.54□□□□□ -0.56
CARF-216ENST00000444724 KAT6BQ8WYB5 2073 aa11.54□□□□□ -0.56
CARF-216ENST00000444724 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
CARF-216ENST00000444724 A0A087WZG4 1122 aa11.53□□□□□ -0.56
CARF-216ENST00000444724 GNPATO15228 680 aa11.53□□□□□ -0.56
CARF-216ENST00000444724 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
CARF-216ENST00000444724 CCDC87Q9NVE4 849 aa11.53□□□□□ -0.56
CARF-216ENST00000444724 SOS1Q07889 1333 aaPredicted RBP11.53□□□□□ -0.56
CARF-216ENST00000444724 ARFGEF2Q9Y6D5 1785 aa11.53□□□□□ -0.56
CARF-216ENST00000444724 USP42Q9H9J4 1324 aaKnown RBP11.53□□□□□ -0.56
CARF-216ENST00000444724 KDM3BQ7LBC6 1761 aa11.52□□□□□ -0.56
CARF-216ENST00000444724 FCHSD2O94868 740 aa11.52□□□□□ -0.57
CARF-216ENST00000444724 PNNQ9H307 717 aaKnown RBP11.52□□□□□ -0.57
CARF-216ENST00000444724 MYH14Q7Z406 1995 aaKnown RBP11.52□□□□□ -0.57
CARF-216ENST00000444724 GNAT3A8MTJ3 354 aa11.51□□□□□ -0.57
CARF-216ENST00000444724 MTHFSDQ2M296 383 aaKnown RBP11.51□□□□□ -0.57
CARF-216ENST00000444724 RSPH6AQ9H0K4 717 aa11.51□□□□□ -0.57
CARF-216ENST00000444724 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
CARF-216ENST00000444724 GPR162Q16538 588 aa11.51□□□□□ -0.57
CARF-216ENST00000444724 ZFP91Q96JP5 570 aaPredicted RBP11.51□□□□□ -0.57
CARF-216ENST00000444724 HEG1Q9ULI3 1381 aa11.51□□□□□ -0.57
CARF-216ENST00000444724 MSH5O43196 834 aa11.5□□□□□ -0.57
CARF-216ENST00000444724 CRKLP46109 303 aaKnown RBP11.5□□□□□ -0.57
CARF-216ENST00000444724 GYS1P13807 737 aa11.5□□□□□ -0.57
CARF-216ENST00000444724 PPP2R1AP30153 589 aa11.5□□□□□ -0.57
CARF-216ENST00000444724 KCNQ4P56696 695 aa11.5□□□□□ -0.57
CARF-216ENST00000444724 INTS5Q6P9B9 1019 aaKnown RBP11.5□□□□□ -0.57
CARF-216ENST00000444724 NFATC2IPQ8NCF5 419 aa11.5□□□□□ -0.57
CARF-216ENST00000444724 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
CARF-216ENST00000444724 CYP19A1P11511 503 aaPredicted RBP11.5□□□□□ -0.57
CARF-216ENST00000444724 RFC4P35249 363 aa11.5□□□□□ -0.57
CARF-216ENST00000444724 NLGN2Q8NFZ4 835 aa11.5□□□□□ -0.57
CARF-216ENST00000444724 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
CARF-216ENST00000444724 CC2D1BQ5T0F9 858 aaKnown RBP11.49□□□□□ -0.57
CARF-216ENST00000444724 PARP3Q9Y6F1 533 aa11.49□□□□□ -0.57
CARF-216ENST00000444724 ZC3H4Q9UPT8 1303 aaKnown RBP11.49□□□□□ -0.57
CARF-216ENST00000444724 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
CARF-216ENST00000444724 NARFQ9UHQ1 456 aa11.49□□□□□ -0.57
CARF-216ENST00000444724 COL15A1P39059 1388 aa11.49□□□□□ -0.57
CARF-216ENST00000444724 TM4SF1P30408 202 aa11.48□□□□□ -0.57
CARF-216ENST00000444724 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
CARF-216ENST00000444724 PNISRQ8TF01 805 aaKnown RBP11.48□□□□□ -0.57
CARF-216ENST00000444724 BABAM1Q9NWV8 329 aa11.48□□□□□ -0.57
CARF-216ENST00000444724 ATP10DQ9P241 1426 aa11.48□□□□□ -0.57
CARF-216ENST00000444724 RALBP1Q15311 655 aa11.48□□□□□ -0.57
CARF-216ENST00000444724 ZNF784Q8NCA9 323 aaPredicted RBP11.48□□□□□ -0.57
CARF-216ENST00000444724 AFDNP55196 1824 aaKnown RBP11.47□□□□□ -0.57
CARF-216ENST00000444724 STARD3NLO95772 234 aa11.47□□□□□ -0.57
CARF-216ENST00000444724 YBX3P16989 372 aaKnown RBP eCLIP11.47□□□□□ -0.57
CARF-216ENST00000444724 RIC1Q4ADV7 1423 aa11.47□□□□□ -0.57
CARF-216ENST00000444724 MMP10P09238 476 aa11.46□□□□□ -0.57
CARF-216ENST00000444724 TTC5Q8N0Z6 440 aa11.46□□□□□ -0.57
CARF-216ENST00000444724 N4BP2Q86UW6 1770 aaPredicted RBP11.46□□□□□ -0.57
CARF-216ENST00000444724 TNRC6CQ9HCJ0 1690 aaKnown RBP11.46□□□□□ -0.57
CARF-216ENST00000444724 PHF14O94880 888 aa11.46□□□□□ -0.57
CARF-216ENST00000444724 IL6STP40189 918 aaPredicted RBP11.46□□□□□ -0.57
CARF-216ENST00000444724 FMNL2Q96PY5 1086 aa11.46□□□□□ -0.57
CARF-216ENST00000444724 IBTKQ9P2D0 1353 aaPredicted RBP11.46□□□□□ -0.58
CARF-216ENST00000444724 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.58
CARF-216ENST00000444724 MSL1Q68DK7 614 aa11.46□□□□□ -0.58
CARF-216ENST00000444724 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.58
CARF-216ENST00000444724 ZNF592Q92610 1267 aa11.46□□□□□ -0.58
CARF-216ENST00000444724 LGR6Q9HBX8 967 aa11.46□□□□□ -0.58
CARF-216ENST00000444724 HMOX1P09601 288 aa11.45□□□□□ -0.58
CARF-216ENST00000444724 TEFQ10587 303 aa11.45□□□□□ -0.58
CARF-216ENST00000444724 YTHDC1Q96MU7 727 aaKnown RBP11.45□□□□□ -0.58
CARF-216ENST00000444724 EIF5P55010 431 aaKnown RBP11.45□□□□□ -0.58
CARF-216ENST00000444724 ZNF790Q6PG37 636 aa11.45□□□□□ -0.58
CARF-216ENST00000444724 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
CARF-216ENST00000444724 DNAJC10Q8IXB1 793 aa11.44□□□□□ -0.58
CARF-216ENST00000444724 IL17REQ8NFR9 667 aa11.44□□□□□ -0.58
CARF-216ENST00000444724 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
CARF-216ENST00000444724 HMGB1P09429 215 aaKnown RBP11.44□□□□□ -0.58
CARF-216ENST00000444724 DLG5Q8TDM6 1919 aa11.44□□□□□ -0.58
CARF-216ENST00000444724 ZPR1O75312 459 aa11.43□□□□□ -0.58
CARF-216ENST00000444724 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
CARF-216ENST00000444724 U2SURPO15042 1029 aaKnown RBP11.42□□□□□ -0.58
CARF-216ENST00000444724 NEFMP07197 916 aa11.42□□□□□ -0.58
CARF-216ENST00000444724 CLEC4GQ6UXB4 293 aa11.42□□□□□ -0.58
CARF-216ENST00000444724 NAP1L5Q96NT1 182 aaPredicted RBP11.42□□□□□ -0.58
CARF-216ENST00000444724 CARMIL3Q8ND23 1372 aa11.42□□□□□ -0.58
CARF-216ENST00000444724 CENPBP07199 599 aaPredicted RBP11.42□□□□□ -0.58
CARF-216ENST00000444724 RTF1Q92541 710 aaKnown RBP11.42□□□□□ -0.58
CARF-216ENST00000444724 PTCD1O75127 700 aaKnown RBP11.41□□□□□ -0.58
CARF-216ENST00000444724 PLEKHF1Q96S99 279 aa11.41□□□□□ -0.58
CARF-216ENST00000444724 CWC22Q9HCG8 908 aaKnown RBP11.41□□□□□ -0.58
CARF-216ENST00000444724 ANKRD31Q8N7Z5 1873 aa11.41□□□□□ -0.58
CARF-216ENST00000444724 DDR1Q08345 913 aa11.41□□□□□ -0.58
CARF-216ENST00000444724 PIAS4Q8N2W9 510 aaPredicted RBP11.41□□□□□ -0.58
CARF-216ENST00000444724 PRDM10Q9NQV6 1147 aa11.41□□□□□ -0.58
CARF-216ENST00000444724 PIM2Q9P1W9 311 aa11.41□□□□□ -0.58
CARF-216ENST00000444724 GIGYF1O75420 1035 aaPredicted RBP11.4□□□□□ -0.58
CARF-216ENST00000444724 RBM25P49756 843 aaKnown RBP11.4□□□□□ -0.58
CARF-216ENST00000444724 LMOD3Q0VAK6 560 aa11.4□□□□□ -0.58
CARF-216ENST00000444724 ZNF526Q8TF50 670 aaPredicted RBP11.4□□□□□ -0.58
CARF-216ENST00000444724 LTBP3Q9NS15 1303 aa11.4□□□□□ -0.58
CARF-216ENST00000444724 SNRPA1P09661 255 aaKnown RBP11.4□□□□□ -0.58
CARF-216ENST00000444724 KCNA3P22001 575 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms