RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 FCHSD2O94868 740 aa14.55□□□□□ -0.08
SF3A1-203ENST00000444440 DCTN1Q14203 1278 aa14.55□□□□□ -0.08
SF3A1-203ENST00000444440 FKBP8Q14318 412 aa14.55□□□□□ -0.08
SF3A1-203ENST00000444440 TEFQ10587 303 aa14.54□□□□□ -0.08
SF3A1-203ENST00000444440 ZNF790Q6PG37 636 aa14.54□□□□□ -0.08
SF3A1-203ENST00000444440 MCM10Q7L590 875 aa14.54□□□□□ -0.08
SF3A1-203ENST00000444440 COL15A1P39059 1388 aa14.54□□□□□ -0.08
SF3A1-203ENST00000444440 HEG1Q9ULI3 1381 aa14.54□□□□□ -0.08
SF3A1-203ENST00000444440 CCDC88AQ3V6T2 1871 aa14.53□□□□□ -0.08
SF3A1-203ENST00000444440 DDR1Q08345 913 aa14.53□□□□□ -0.08
SF3A1-203ENST00000444440 VSIG10Q8N0Z9 540 aa14.53□□□□□ -0.08
SF3A1-203ENST00000444440 PLEKHF1Q96S99 279 aa14.53□□□□□ -0.08
SF3A1-203ENST00000444440 SBF1O95248 1867 aa14.52□□□□□ -0.08
SF3A1-203ENST00000444440 COL11A2P13942 1736 aaPredicted RBP14.52□□□□□ -0.08
SF3A1-203ENST00000444440 NLGN1Q8N2Q7 840 aa14.52□□□□□ -0.09
SF3A1-203ENST00000444440 ZNF784Q8NCA9 323 aaPredicted RBP14.52□□□□□ -0.09
SF3A1-203ENST00000444440 BCL2L12Q9HB09 334 aa14.52□□□□□ -0.09
SF3A1-203ENST00000444440 PRAMEF22A3QJZ6 481 aa14.51□□□□□ -0.09
SF3A1-203ENST00000444440 USPL1Q5W0Q7 1092 aa14.51□□□□□ -0.09
SF3A1-203ENST00000444440 TTC5Q8N0Z6 440 aa14.51□□□□□ -0.09
SF3A1-203ENST00000444440 NUP98P52948 1817 aa14.5□□□□□ -0.09
SF3A1-203ENST00000444440 BTBD11A6QL63 1104 aa14.5□□□□□ -0.09
SF3A1-203ENST00000444440 CANXP27824 592 aaKnown RBP14.5□□□□□ -0.09
SF3A1-203ENST00000444440 TM4SF1P30408 202 aa14.5□□□□□ -0.09
SF3A1-203ENST00000444440 POLRMTO00411 1230 aaKnown RBP14.49□□□□□ -0.09
SF3A1-203ENST00000444440 A0A0G2JLW4 131 aa14.48□□□□□ -0.09
SF3A1-203ENST00000444440 A1BGP04217 495 aa14.48□□□□□ -0.09
SF3A1-203ENST00000444440 ZEB1P37275 1124 aaPredicted RBP14.48□□□□□ -0.09
SF3A1-203ENST00000444440 PIP4K2AP48426 406 aaPredicted RBP14.48□□□□□ -0.09
SF3A1-203ENST00000444440 EIF5P55010 431 aaKnown RBP14.48□□□□□ -0.09
SF3A1-203ENST00000444440 NARFQ9UHQ1 456 aa14.48□□□□□ -0.09
SF3A1-203ENST00000444440 PARP3Q9Y6F1 533 aa14.48□□□□□ -0.09
SF3A1-203ENST00000444440 DPEP1P16444 411 aa14.47□□□□□ -0.09
SF3A1-203ENST00000444440 KCNA3P22001 575 aa14.47□□□□□ -0.09
SF3A1-203ENST00000444440 RALBP1Q15311 655 aa14.47□□□□□ -0.09
SF3A1-203ENST00000444440 FMNL2Q96PY5 1086 aa14.47□□□□□ -0.09
SF3A1-203ENST00000444440 THUMPD2Q9BTF0 503 aaKnown RBP14.47□□□□□ -0.09
SF3A1-203ENST00000444440 MIS18AQ9NYP9 233 aa14.47□□□□□ -0.09
SF3A1-203ENST00000444440 USP16Q9Y5T5 823 aa14.47□□□□□ -0.09
SF3A1-203ENST00000444440 CARMIL3Q8ND23 1372 aa14.47□□□□□ -0.09
SF3A1-203ENST00000444440 HTATSF1O43719 755 aaKnown RBP14.46□□□□□ -0.09
SF3A1-203ENST00000444440 GRIN3BO60391 1043 aa14.46□□□□□ -0.09
SF3A1-203ENST00000444440 ZPR1O75312 459 aa14.46□□□□□ -0.09
SF3A1-203ENST00000444440 STARD3NLO95772 234 aa14.46□□□□□ -0.09
SF3A1-203ENST00000444440 NFIXQ14938 502 aa14.46□□□□□ -0.09
SF3A1-203ENST00000444440 RTF1Q92541 710 aaKnown RBP14.46□□□□□ -0.09
SF3A1-203ENST00000444440 ARFGEF2Q9Y6D5 1785 aa14.46□□□□□ -0.09
SF3A1-203ENST00000444440 MYBBP1AQ9BQG0 1328 aaKnown RBP14.45□□□□□ -0.1
SF3A1-203ENST00000444440 TGFB2P61812 414 aa14.45□□□□□ -0.1
SF3A1-203ENST00000444440 NFE2L2Q16236 605 aa14.45□□□□□ -0.1
SF3A1-203ENST00000444440 ADCY9O60503 1353 aa14.45□□□□□ -0.1
SF3A1-203ENST00000444440 TBC1D2BQ9UPU7 963 aa14.44□□□□□ -0.1
SF3A1-203ENST00000444440 CHRNA5P30532 468 aa14.43□□□□□ -0.1
SF3A1-203ENST00000444440 TEX13AQ9BXU3 409 aaPredicted RBP14.43□□□□□ -0.1
SF3A1-203ENST00000444440 ZNF330Q9Y3S2 320 aaPredicted RBP14.43□□□□□ -0.1
SF3A1-203ENST00000444440 ATP10DQ9P241 1426 aa14.42□□□□□ -0.1
SF3A1-203ENST00000444440 NBPF26B4DH59 902 aa14.42□□□□□ -0.1
SF3A1-203ENST00000444440 CAMTA2O94983 1202 aa14.42□□□□□ -0.1
SF3A1-203ENST00000444440 IL6STP40189 918 aaPredicted RBP14.42□□□□□ -0.1
SF3A1-203ENST00000444440 TAF7Q15545 349 aaPredicted RBP14.42□□□□□ -0.1
SF3A1-203ENST00000444440 TBC1D9BQ66K14 1250 aa14.42□□□□□ -0.1
SF3A1-203ENST00000444440 NBPF10Q6P3W6 841 aaKnown RBP14.42□□□□□ -0.1
SF3A1-203ENST00000444440 NBPF15Q8N660 670 aa14.42□□□□□ -0.1
SF3A1-203ENST00000444440 BCS1LQ9Y276 419 aa14.42□□□□□ -0.1
SF3A1-203ENST00000444440 SLX4Q8IY92 1834 aa14.42□□□□□ -0.1
SF3A1-203ENST00000444440 ANKRD36CQ5JPF3 1778 aa14.42□□□□□ -0.1
SF3A1-203ENST00000444440 FER1L6Q2WGJ9 1857 aa14.42□□□□□ -0.1
SF3A1-203ENST00000444440 TIAM2Q8IVF5 1701 aa14.41□□□□□ -0.1
SF3A1-203ENST00000444440 DICER1Q9UPY3 1922 aaKnown RBP14.41□□□□□ -0.1
SF3A1-203ENST00000444440 SERPINB2P05120 415 aa14.41□□□□□ -0.1
SF3A1-203ENST00000444440 BICDL1Q6ZP65 573 aa14.41□□□□□ -0.1
SF3A1-203ENST00000444440 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
SF3A1-203ENST00000444440 PRKRIP1Q9H875 184 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-203ENST00000444440 TNRC6CQ9HCJ0 1690 aaKnown RBP14.41□□□□□ -0.1
SF3A1-203ENST00000444440 MAPK8IP3Q9UPT6 1336 aa14.41□□□□□ -0.1
SF3A1-203ENST00000444440 SNRPA1P09661 255 aaKnown RBP14.4□□□□□ -0.1
SF3A1-203ENST00000444440 A0A087WZG4 1122 aa14.39□□□□□ -0.11
SF3A1-203ENST00000444440 EIF4A1P60842 406 aaKnown RBP14.39□□□□□ -0.11
SF3A1-203ENST00000444440 CCDC24Q8N4L8 307 aa14.39□□□□□ -0.11
SF3A1-203ENST00000444440 RRP7AQ9Y3A4 280 aaKnown RBP14.39□□□□□ -0.11
SF3A1-203ENST00000444440 NEFMP07197 916 aa14.38□□□□□ -0.11
SF3A1-203ENST00000444440 TMPOP42166 694 aaKnown RBP14.38□□□□□ -0.11
SF3A1-203ENST00000444440 RIPK4P57078 832 aa14.38□□□□□ -0.11
SF3A1-203ENST00000444440 DZIP3Q86Y13 1208 aaKnown RBP14.38□□□□□ -0.11
SF3A1-203ENST00000444440 LAMB2P55268 1798 aa14.37□□□□□ -0.11
SF3A1-203ENST00000444440 GIGYF1O75420 1035 aaPredicted RBP14.37□□□□□ -0.11
SF3A1-203ENST00000444440 PIM2Q9P1W9 311 aa14.37□□□□□ -0.11
SF3A1-203ENST00000444440 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
SF3A1-203ENST00000444440 PRR5LQ6MZQ0 368 aa14.36□□□□□ -0.11
SF3A1-203ENST00000444440 PNNQ9H307 717 aaKnown RBP14.36□□□□□ -0.11
SF3A1-203ENST00000444440 NEUROD2Q15784 382 aa14.35□□□□□ -0.11
SF3A1-203ENST00000444440 CCDC184Q52MB2 194 aa14.35□□□□□ -0.11
SF3A1-203ENST00000444440 ARHGAP27Q6ZUM4 889 aa14.35□□□□□ -0.11
SF3A1-203ENST00000444440 ZNF526Q8TF50 670 aaPredicted RBP14.35□□□□□ -0.11
SF3A1-203ENST00000444440 TRIM35Q9UPQ4 493 aa14.35□□□□□ -0.11
SF3A1-203ENST00000444440 HLFQ16534 295 aa14.34□□□□□ -0.11
SF3A1-203ENST00000444440 DALRD3Q5D0E6 543 aaKnown RBP14.34□□□□□ -0.11
SF3A1-203ENST00000444440 PNISRQ8TF01 805 aaKnown RBP14.34□□□□□ -0.11
SF3A1-203ENST00000444440 PRELPP51888 382 aa14.33□□□□□ -0.12
SF3A1-203ENST00000444440 C2CD5Q86YS7 1000 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms