RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 PER1O15534 1290 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-209ENST00000442653 CYP19A1P11511 503 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-209ENST00000442653 TM4SF1P30408 202 aa11.34□□□□□ -0.59
TOP3B-209ENST00000442653 MTHFSDQ2M296 383 aaKnown RBP11.34□□□□□ -0.59
TOP3B-209ENST00000442653 C9orf131Q5VYM1 1079 aa11.34□□□□□ -0.59
TOP3B-209ENST00000442653 PIM2Q9P1W9 311 aa11.34□□□□□ -0.59
TOP3B-209ENST00000442653 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
TOP3B-209ENST00000442653 RNMTO43148 476 aaKnown RBP11.33□□□□□ -0.6
TOP3B-209ENST00000442653 DALRD3Q5D0E6 543 aaKnown RBP11.33□□□□□ -0.6
TOP3B-209ENST00000442653 CC2D1BQ5T0F9 858 aaKnown RBP11.33□□□□□ -0.6
TOP3B-209ENST00000442653 USPL1Q5W0Q7 1092 aa11.33□□□□□ -0.6
TOP3B-209ENST00000442653 ZBTB1Q9Y2K1 713 aa11.33□□□□□ -0.6
TOP3B-209ENST00000442653 ZPR1O75312 459 aa11.32□□□□□ -0.6
TOP3B-209ENST00000442653 TOMM70O94826 608 aa11.32□□□□□ -0.6
TOP3B-209ENST00000442653 NFIXQ14938 502 aa11.32□□□□□ -0.6
TOP3B-209ENST00000442653 IFFO2Q5TF58 517 aa11.32□□□□□ -0.6
TOP3B-209ENST00000442653 BCL2L12Q9HB09 334 aa11.32□□□□□ -0.6
TOP3B-209ENST00000442653 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
TOP3B-209ENST00000442653 COL3A1P02461 1466 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-209ENST00000442653 UBR2Q8IWV8 1755 aa11.31□□□□□ -0.6
TOP3B-209ENST00000442653 COL15A1P39059 1388 aa11.31□□□□□ -0.6
TOP3B-209ENST00000442653 AFDNP55196 1824 aaKnown RBP11.31□□□□□ -0.6
TOP3B-209ENST00000442653 DIAPH1O60610 1272 aaKnown RBP11.31□□□□□ -0.6
TOP3B-209ENST00000442653 NARFQ9UHQ1 456 aa11.31□□□□□ -0.6
TOP3B-209ENST00000442653 NRXN2Q9P2S2 1712 aa11.3□□□□□ -0.6
TOP3B-209ENST00000442653 RNF181Q9P0P0 153 aa11.3□□□□□ -0.6
TOP3B-209ENST00000442653 CARMIL3Q8ND23 1372 aa11.29□□□□□ -0.6
TOP3B-209ENST00000442653 APLP1P51693 650 aa11.29□□□□□ -0.6
TOP3B-209ENST00000442653 VSIG10Q8N0Z9 540 aa11.29□□□□□ -0.6
TOP3B-209ENST00000442653 DNAJC5GQ8N7S2 189 aa11.29□□□□□ -0.6
TOP3B-209ENST00000442653 SBF1O95248 1867 aa11.29□□□□□ -0.6
TOP3B-209ENST00000442653 CANXP27824 592 aaKnown RBP11.28□□□□□ -0.6
TOP3B-209ENST00000442653 PRELPP51888 382 aa11.28□□□□□ -0.6
TOP3B-209ENST00000442653 CNGB1Q14028 1251 aaPredicted RBP11.28□□□□□ -0.6
TOP3B-209ENST00000442653 IL17REQ8NFR9 667 aa11.28□□□□□ -0.6
TOP3B-209ENST00000442653 ZNF496Q96IT1 587 aaPredicted RBP11.28□□□□□ -0.6
TOP3B-209ENST00000442653 DLEC1Q9Y238 1755 aa11.28□□□□□ -0.6
TOP3B-209ENST00000442653 U2SURPO15042 1029 aaKnown RBP11.27□□□□□ -0.61
TOP3B-209ENST00000442653 SERPINB2P05120 415 aa11.27□□□□□ -0.61
TOP3B-209ENST00000442653 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.61
TOP3B-209ENST00000442653 RASSF7Q02833 373 aa11.27□□□□□ -0.61
TOP3B-209ENST00000442653 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.61
TOP3B-209ENST00000442653 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
TOP3B-209ENST00000442653 SIPA1L3O60292 1781 aaPredicted RBP11.26□□□□□ -0.61
TOP3B-209ENST00000442653 HTRA3P83110 453 aa11.26□□□□□ -0.61
TOP3B-209ENST00000442653 KDM2BQ8NHM5 1336 aa11.26□□□□□ -0.61
TOP3B-209ENST00000442653 HEG1Q9ULI3 1381 aa11.26□□□□□ -0.61
TOP3B-209ENST00000442653 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
TOP3B-209ENST00000442653 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
TOP3B-209ENST00000442653 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
TOP3B-209ENST00000442653 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
TOP3B-209ENST00000442653 STARD3NLO95772 234 aa11.25□□□□□ -0.61
TOP3B-209ENST00000442653 ZNF790Q6PG37 636 aa11.25□□□□□ -0.61
TOP3B-209ENST00000442653 BICDL1Q6ZP65 573 aa11.25□□□□□ -0.61
TOP3B-209ENST00000442653 C2CD5Q86YS7 1000 aa11.25□□□□□ -0.61
TOP3B-209ENST00000442653 TTC5Q8N0Z6 440 aa11.25□□□□□ -0.61
TOP3B-209ENST00000442653 RRAGCQ9HB90 399 aa11.25□□□□□ -0.61
TOP3B-209ENST00000442653 ANKRD31Q8N7Z5 1873 aa11.25□□□□□ -0.61
TOP3B-209ENST00000442653 NFKBIEO00221 500 aa11.24□□□□□ -0.61
TOP3B-209ENST00000442653 TEFQ10587 303 aa11.24□□□□□ -0.61
TOP3B-209ENST00000442653 TBC1D9BQ66K14 1250 aa11.24□□□□□ -0.61
TOP3B-209ENST00000442653 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
TOP3B-209ENST00000442653 TTLL6Q8N841 843 aa11.24□□□□□ -0.61
TOP3B-209ENST00000442653 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
TOP3B-209ENST00000442653 PHACTR3Q96KR7 559 aa11.24□□□□□ -0.61
TOP3B-209ENST00000442653 CEMIPQ8WUJ3 1361 aa11.24□□□□□ -0.61
TOP3B-209ENST00000442653 COL11A2P13942 1736 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-209ENST00000442653 H0YIN7 160 aa11.23□□□□□ -0.61
TOP3B-209ENST00000442653 KCNQ3O43525 872 aa11.23□□□□□ -0.61
TOP3B-209ENST00000442653 LMNB1P20700 586 aa11.23□□□□□ -0.61
TOP3B-209ENST00000442653 FSTL1Q12841 308 aa11.23□□□□□ -0.61
TOP3B-209ENST00000442653 CCDC24Q8N4L8 307 aa11.23□□□□□ -0.61
TOP3B-209ENST00000442653 TBC1D2BQ9UPU7 963 aa11.23□□□□□ -0.61
TOP3B-209ENST00000442653 ZNF330Q9Y3S2 320 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-209ENST00000442653 ZC3H4Q9UPT8 1303 aaKnown RBP11.23□□□□□ -0.61
TOP3B-209ENST00000442653 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
TOP3B-209ENST00000442653 A0A087WZG4 1122 aa11.22□□□□□ -0.61
TOP3B-209ENST00000442653 A1BGP04217 495 aa11.22□□□□□ -0.61
TOP3B-209ENST00000442653 PRR5LQ6MZQ0 368 aa11.22□□□□□ -0.61
TOP3B-209ENST00000442653 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
TOP3B-209ENST00000442653 CAMTA2O94983 1202 aa11.21□□□□□ -0.61
TOP3B-209ENST00000442653 PRKAR2BP31323 418 aa11.21□□□□□ -0.61
TOP3B-209ENST00000442653 IL6STP40189 918 aaPredicted RBP11.21□□□□□ -0.61
TOP3B-209ENST00000442653 KLRG1Q96E93 195 aa11.21□□□□□ -0.61
TOP3B-209ENST00000442653 FMNL2Q96PY5 1086 aa11.21□□□□□ -0.61
TOP3B-209ENST00000442653 BRIP1Q9BX63 1249 aa11.21□□□□□ -0.61
TOP3B-209ENST00000442653 TEX13AQ9BXU3 409 aaPredicted RBP11.21□□□□□ -0.61
TOP3B-209ENST00000442653 CCDC88AQ3V6T2 1871 aa11.21□□□□□ -0.62
TOP3B-209ENST00000442653 PRAMEF22A3QJZ6 481 aa11.2□□□□□ -0.62
TOP3B-209ENST00000442653 GLTPD2A6NH11 291 aa11.2□□□□□ -0.62
TOP3B-209ENST00000442653 PIP4K2AP48426 406 aaPredicted RBP11.2□□□□□ -0.62
TOP3B-209ENST00000442653 BCORQ6W2J9 1755 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 BTBD11A6QL63 1104 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 POTECB2RU33 542 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 C21orf2O43822 256 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 VEGFAP15692 232 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-209ENST00000442653 PDE6BP35913 854 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 JMYQ8N9B5 988 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 CNBD1Q8NA66 436 aa11.19□□□□□ -0.62
TOP3B-209ENST00000442653 SMC1BQ8NDV3 1235 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms