RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 EIF4G2P78344 907 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRIM13-205ENST00000442421 RASSF7Q02833 373 aa17.5■□□□□ 0.39
TRIM13-205ENST00000442421 KLRG1Q96E93 195 aa17.5■□□□□ 0.39
TRIM13-205ENST00000442421 SOS1Q07889 1333 aaPredicted RBP17.49■□□□□ 0.39
TRIM13-205ENST00000442421 UBR2Q8IWV8 1755 aa17.49■□□□□ 0.39
TRIM13-205ENST00000442421 IL13P35225 146 aa17.49■□□□□ 0.39
TRIM13-205ENST00000442421 SLC52A2Q9HAB3 445 aa17.49■□□□□ 0.39
TRIM13-205ENST00000442421 SLC39A6Q13433 755 aa17.48■□□□□ 0.39
TRIM13-205ENST00000442421 AKAP4Q5JQC9 854 aa17.48■□□□□ 0.39
TRIM13-205ENST00000442421 LGR6Q9HBX8 967 aa17.48■□□□□ 0.39
TRIM13-205ENST00000442421 CYP19A1P11511 503 aaPredicted RBP17.47■□□□□ 0.39
TRIM13-205ENST00000442421 NFIXQ14938 502 aa17.47■□□□□ 0.39
TRIM13-205ENST00000442421 COL15A1P39059 1388 aa17.47■□□□□ 0.39
TRIM13-205ENST00000442421 ANKRD31Q8N7Z5 1873 aa17.47■□□□□ 0.39
TRIM13-205ENST00000442421 JMYQ8N9B5 988 aa17.46■□□□□ 0.39
TRIM13-205ENST00000442421 ZBTB1Q9Y2K1 713 aa17.46■□□□□ 0.39
TRIM13-205ENST00000442421 CACNA1SQ13698 1873 aa17.46■□□□□ 0.38
TRIM13-205ENST00000442421 COL13A1Q5TAT6 717 aaPredicted RBP17.45■□□□□ 0.38
TRIM13-205ENST00000442421 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
TRIM13-205ENST00000442421 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
TRIM13-205ENST00000442421 NARFQ9UHQ1 456 aa17.45■□□□□ 0.38
TRIM13-205ENST00000442421 KNSTRNQ9Y448 316 aa17.45■□□□□ 0.38
TRIM13-205ENST00000442421 DICER1Q9UPY3 1922 aaKnown RBP17.45■□□□□ 0.38
TRIM13-205ENST00000442421 CARMIL3Q8ND23 1372 aa17.44■□□□□ 0.38
TRIM13-205ENST00000442421 RNMTO43148 476 aaKnown RBP17.44■□□□□ 0.38
TRIM13-205ENST00000442421 HMOX1P09601 288 aa17.44■□□□□ 0.38
TRIM13-205ENST00000442421 PRELPP51888 382 aa17.44■□□□□ 0.38
TRIM13-205ENST00000442421 SMC1BQ8NDV3 1235 aa17.44■□□□□ 0.38
TRIM13-205ENST00000442421 CLSPNQ9HAW4 1339 aa17.44■□□□□ 0.38
TRIM13-205ENST00000442421 COL11A2P13942 1736 aaPredicted RBP17.44■□□□□ 0.38
TRIM13-205ENST00000442421 SERPINB2P05120 415 aa17.43■□□□□ 0.38
TRIM13-205ENST00000442421 LMNB1P20700 586 aa17.43■□□□□ 0.38
TRIM13-205ENST00000442421 ZC3H4Q9UPT8 1303 aaKnown RBP17.43■□□□□ 0.38
TRIM13-205ENST00000442421 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
TRIM13-205ENST00000442421 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
TRIM13-205ENST00000442421 SIPA1L3O60292 1781 aaPredicted RBP17.41■□□□□ 0.38
TRIM13-205ENST00000442421 CANXP27824 592 aaKnown RBP17.41■□□□□ 0.38
TRIM13-205ENST00000442421 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
TRIM13-205ENST00000442421 C2CD5Q86YS7 1000 aa17.41■□□□□ 0.38
TRIM13-205ENST00000442421 TTLL6Q8N841 843 aa17.41■□□□□ 0.38
TRIM13-205ENST00000442421 GLTPD2A6NH11 291 aa17.4■□□□□ 0.38
TRIM13-205ENST00000442421 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
TRIM13-205ENST00000442421 AMER1Q5JTC6 1135 aaPredicted RBP17.4■□□□□ 0.38
TRIM13-205ENST00000442421 BICDL1Q6ZP65 573 aa17.4■□□□□ 0.38
TRIM13-205ENST00000442421 NFKBIEO00221 500 aa17.39■□□□□ 0.37
TRIM13-205ENST00000442421 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
TRIM13-205ENST00000442421 H0YIN7 160 aa17.38■□□□□ 0.37
TRIM13-205ENST00000442421 CAPN15O75808 1086 aa17.38■□□□□ 0.37
TRIM13-205ENST00000442421 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
TRIM13-205ENST00000442421 EIF5P55010 431 aaKnown RBP17.36■□□□□ 0.37
TRIM13-205ENST00000442421 TNS4Q8IZW8 715 aa17.36■□□□□ 0.37
TRIM13-205ENST00000442421 CCDC24Q8N4L8 307 aa17.36■□□□□ 0.37
TRIM13-205ENST00000442421 ZNF219Q9P2Y4 722 aaPredicted RBP17.36■□□□□ 0.37
TRIM13-205ENST00000442421 BCORQ6W2J9 1755 aa17.35■□□□□ 0.37
TRIM13-205ENST00000442421 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
TRIM13-205ENST00000442421 TBC1D9BQ66K14 1250 aa17.35■□□□□ 0.37
TRIM13-205ENST00000442421 TTC5Q8N0Z6 440 aa17.35■□□□□ 0.37
TRIM13-205ENST00000442421 ZNF330Q9Y3S2 320 aaPredicted RBP17.35■□□□□ 0.37
TRIM13-205ENST00000442421 POTECB2RU33 542 aa17.34■□□□□ 0.37
TRIM13-205ENST00000442421 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
TRIM13-205ENST00000442421 STARD3NLO95772 234 aa17.34■□□□□ 0.37
TRIM13-205ENST00000442421 ZNF622Q969S3 477 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRIM13-205ENST00000442421 A0A087WZG4 1122 aa17.33■□□□□ 0.36
TRIM13-205ENST00000442421 C21orf2O43822 256 aa17.33■□□□□ 0.36
TRIM13-205ENST00000442421 HSPA1AP0DMV8 641 aaKnown RBP17.33■□□□□ 0.36
TRIM13-205ENST00000442421 HSPA1BP0DMV9 641 aaKnown RBP17.33■□□□□ 0.36
TRIM13-205ENST00000442421 ZNF496Q96IT1 587 aaPredicted RBP17.33■□□□□ 0.36
TRIM13-205ENST00000442421 COL3A1P02461 1466 aaPredicted RBP17.32■□□□□ 0.36
TRIM13-205ENST00000442421 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
TRIM13-205ENST00000442421 KIF7Q2M1P5 1343 aa17.32■□□□□ 0.36
TRIM13-205ENST00000442421 CC2D1BQ5T0F9 858 aaKnown RBP17.32■□□□□ 0.36
TRIM13-205ENST00000442421 PRR5LQ6MZQ0 368 aa17.32■□□□□ 0.36
TRIM13-205ENST00000442421 TBC1D2BQ9UPU7 963 aa17.32■□□□□ 0.36
TRIM13-205ENST00000442421 PDE6BP35913 854 aa17.31■□□□□ 0.36
TRIM13-205ENST00000442421 ERFEQ4G0M1 354 aa17.31■□□□□ 0.36
TRIM13-205ENST00000442421 DPY19L2Q6NUT2 758 aa17.31■□□□□ 0.36
TRIM13-205ENST00000442421 BRIP1Q9BX63 1249 aa17.31■□□□□ 0.36
TRIM13-205ENST00000442421 TEFQ10587 303 aa17.3■□□□□ 0.36
TRIM13-205ENST00000442421 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
TRIM13-205ENST00000442421 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
TRIM13-205ENST00000442421 GNAT3A8MTJ3 354 aa17.28■□□□□ 0.36
TRIM13-205ENST00000442421 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
TRIM13-205ENST00000442421 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
TRIM13-205ENST00000442421 A1BGP04217 495 aa17.28■□□□□ 0.36
TRIM13-205ENST00000442421 IL6STP40189 918 aaPredicted RBP17.28■□□□□ 0.36
TRIM13-205ENST00000442421 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
TRIM13-205ENST00000442421 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
TRIM13-205ENST00000442421 PDZRN3Q9UPQ7 1066 aa17.28■□□□□ 0.36
TRIM13-205ENST00000442421 SCN4AP35499 1836 aa17.27■□□□□ 0.36
TRIM13-205ENST00000442421 NPHP1O15259 732 aa17.27■□□□□ 0.36
TRIM13-205ENST00000442421 CAMTA2O94983 1202 aa17.27■□□□□ 0.36
TRIM13-205ENST00000442421 POTEIP0CG38 1075 aa17.27■□□□□ 0.36
TRIM13-205ENST00000442421 POTEJP0CG39 1038 aa17.27■□□□□ 0.36
TRIM13-205ENST00000442421 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
TRIM13-205ENST00000442421 TAOK3Q9H2K8 898 aa17.27■□□□□ 0.36
TRIM13-205ENST00000442421 LTBP3Q9NS15 1303 aa17.26■□□□□ 0.35
TRIM13-205ENST00000442421 DDNO94850 711 aaPredicted RBP17.26■□□□□ 0.35
TRIM13-205ENST00000442421 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
TRIM13-205ENST00000442421 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
TRIM13-205ENST00000442421 SETDB2Q96T68 719 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms