RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ZNF526Q8TF50 670 aaPredicted RBP15.76■□□□□ 0.11
TTC28-203ENST00000442232 DPEP1P16444 411 aa15.75■□□□□ 0.11
TTC28-203ENST00000442232 PRKAR2BP31323 418 aa15.75■□□□□ 0.11
TTC28-203ENST00000442232 AFDNP55196 1824 aaKnown RBP15.74■□□□□ 0.11
TTC28-203ENST00000442232 ARHGAP27Q6ZUM4 889 aa15.74■□□□□ 0.11
TTC28-203ENST00000442232 NPM2Q86SE8 214 aaKnown RBP15.74■□□□□ 0.11
TTC28-203ENST00000442232 TEX13AQ9BXU3 409 aaPredicted RBP15.74■□□□□ 0.11
TTC28-203ENST00000442232 ZBTB1Q9Y2K1 713 aa15.74■□□□□ 0.11
TTC28-203ENST00000442232 A0A087WZG4 1122 aa15.73■□□□□ 0.11
TTC28-203ENST00000442232 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
TTC28-203ENST00000442232 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
TTC28-203ENST00000442232 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
TTC28-203ENST00000442232 DDR1Q08345 913 aa15.73■□□□□ 0.11
TTC28-203ENST00000442232 PIM2Q9P1W9 311 aa15.73■□□□□ 0.11
TTC28-203ENST00000442232 NARFQ9UHQ1 456 aa15.73■□□□□ 0.11
TTC28-203ENST00000442232 POLRMTO00411 1230 aaKnown RBP15.72■□□□□ 0.11
TTC28-203ENST00000442232 NEFMP07197 916 aa15.72■□□□□ 0.11
TTC28-203ENST00000442232 PPP2R1AP30153 589 aa15.72■□□□□ 0.11
TTC28-203ENST00000442232 DALRD3Q5D0E6 543 aaKnown RBP15.72■□□□□ 0.11
TTC28-203ENST00000442232 ZNF790Q6PG37 636 aa15.72■□□□□ 0.11
TTC28-203ENST00000442232 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
TTC28-203ENST00000442232 RSPH6AQ9H0K4 717 aa15.72■□□□□ 0.11
TTC28-203ENST00000442232 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
TTC28-203ENST00000442232 SCN7AQ01118 1682 aa15.71■□□□□ 0.11
TTC28-203ENST00000442232 IL17REQ8NFR9 667 aa15.71■□□□□ 0.11
TTC28-203ENST00000442232 FMNL2Q96PY5 1086 aa15.71■□□□□ 0.11
TTC28-203ENST00000442232 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
TTC28-203ENST00000442232 BTBD11A6QL63 1104 aa15.7■□□□□ 0.1
TTC28-203ENST00000442232 TM4SF1P30408 202 aa15.7■□□□□ 0.1
TTC28-203ENST00000442232 ZNF496Q96IT1 587 aaPredicted RBP15.7■□□□□ 0.1
TTC28-203ENST00000442232 NRXN2Q9P2S2 1712 aa15.7■□□□□ 0.1
TTC28-203ENST00000442232 NFIXQ14938 502 aa15.69■□□□□ 0.1
TTC28-203ENST00000442232 PHACTR3Q96KR7 559 aa15.69■□□□□ 0.1
TTC28-203ENST00000442232 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
TTC28-203ENST00000442232 DLEC1Q9Y238 1755 aa15.69■□□□□ 0.1
TTC28-203ENST00000442232 SERPINB2P05120 415 aa15.67■□□□□ 0.1
TTC28-203ENST00000442232 KCNA3P22001 575 aa15.67■□□□□ 0.1
TTC28-203ENST00000442232 CHRNA5P30532 468 aa15.67■□□□□ 0.1
TTC28-203ENST00000442232 BICDL1Q6ZP65 573 aa15.67■□□□□ 0.1
TTC28-203ENST00000442232 NPHP1O15259 732 aa15.66■□□□□ 0.1
TTC28-203ENST00000442232 IL6STP40189 918 aaPredicted RBP15.66■□□□□ 0.1
TTC28-203ENST00000442232 EIF5P55010 431 aaKnown RBP15.66■□□□□ 0.1
TTC28-203ENST00000442232 BCORQ6W2J9 1755 aa15.65■□□□□ 0.1
TTC28-203ENST00000442232 C9orf131Q5VYM1 1079 aa15.65■□□□□ 0.1
TTC28-203ENST00000442232 CARMIL3Q8ND23 1372 aa15.64■□□□□ 0.09
TTC28-203ENST00000442232 HTATSF1O43719 755 aaKnown RBP15.64■□□□□ 0.09
TTC28-203ENST00000442232 MCM10Q7L590 875 aa15.64■□□□□ 0.09
TTC28-203ENST00000442232 BCL2L12Q9HB09 334 aa15.64■□□□□ 0.09
TTC28-203ENST00000442232 DLG5Q8TDM6 1919 aa15.64■□□□□ 0.09
TTC28-203ENST00000442232 SBF1O95248 1867 aa15.63■□□□□ 0.09
TTC28-203ENST00000442232 H0YIN7 160 aa15.63■□□□□ 0.09
TTC28-203ENST00000442232 C2CD5Q86YS7 1000 aa15.63■□□□□ 0.09
TTC28-203ENST00000442232 RNF181Q9P0P0 153 aa15.63■□□□□ 0.09
TTC28-203ENST00000442232 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
TTC28-203ENST00000442232 LAMB4A4D0S4 1761 aa15.62■□□□□ 0.09
TTC28-203ENST00000442232 SNRPA1P09661 255 aaKnown RBP15.62■□□□□ 0.09
TTC28-203ENST00000442232 TBC1D9BQ66K14 1250 aa15.62■□□□□ 0.09
TTC28-203ENST00000442232 C16orf71Q8IYS4 520 aaPredicted RBP15.62■□□□□ 0.09
TTC28-203ENST00000442232 TTLL6Q8N841 843 aa15.62■□□□□ 0.09
TTC28-203ENST00000442232 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
TTC28-203ENST00000442232 PDZRN3Q9UPQ7 1066 aa15.62■□□□□ 0.09
TTC28-203ENST00000442232 KDM2BQ8NHM5 1336 aa15.62■□□□□ 0.09
TTC28-203ENST00000442232 ANKRD31Q8N7Z5 1873 aa15.61■□□□□ 0.09
TTC28-203ENST00000442232 TNRC6CQ9HCJ0 1690 aaKnown RBP15.61■□□□□ 0.09
TTC28-203ENST00000442232 KIF3CO14782 793 aa15.61■□□□□ 0.09
TTC28-203ENST00000442232 KCNQ3O43525 872 aa15.61■□□□□ 0.09
TTC28-203ENST00000442232 A1BGP04217 495 aa15.61■□□□□ 0.09
TTC28-203ENST00000442232 HSPA6P17066 643 aa15.61■□□□□ 0.09
TTC28-203ENST00000442232 PDE6BP35913 854 aa15.61■□□□□ 0.09
TTC28-203ENST00000442232 DZIP3Q86Y13 1208 aaKnown RBP15.61■□□□□ 0.09
TTC28-203ENST00000442232 SETDB2Q96T68 719 aa15.61■□□□□ 0.09
TTC28-203ENST00000442232 ZNF652Q9Y2D9 606 aa15.61■□□□□ 0.09
TTC28-203ENST00000442232 MAPK8IP3Q9UPT6 1336 aa15.61■□□□□ 0.09
TTC28-203ENST00000442232 ST5P78524 1137 aa15.6■□□□□ 0.09
TTC28-203ENST00000442232 DCTN1Q14203 1278 aa15.6■□□□□ 0.09
TTC28-203ENST00000442232 CNBD1Q8NA66 436 aa15.6■□□□□ 0.09
TTC28-203ENST00000442232 CACNA1SQ13698 1873 aa15.6■□□□□ 0.09
TTC28-203ENST00000442232 CCDC88AQ3V6T2 1871 aa15.59■□□□□ 0.09
TTC28-203ENST00000442232 CAMTA2O94983 1202 aa15.59■□□□□ 0.09
TTC28-203ENST00000442232 TAF7Q15545 349 aaPredicted RBP15.59■□□□□ 0.09
TTC28-203ENST00000442232 PNISRQ8TF01 805 aaKnown RBP15.59■□□□□ 0.09
TTC28-203ENST00000442232 ZNF622Q969S3 477 aaKnown RBP eCLIP15.59■□□□□ 0.09
TTC28-203ENST00000442232 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
TTC28-203ENST00000442232 COL11A2P13942 1736 aaPredicted RBP15.59■□□□□ 0.09
TTC28-203ENST00000442232 TIAM2Q8IVF5 1701 aa15.59■□□□□ 0.09
TTC28-203ENST00000442232 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.08
TTC28-203ENST00000442232 TOMM70O94826 608 aa15.58■□□□□ 0.08
TTC28-203ENST00000442232 RASSF7Q02833 373 aa15.58■□□□□ 0.08
TTC28-203ENST00000442232 PRR5LQ6MZQ0 368 aa15.58■□□□□ 0.08
TTC28-203ENST00000442232 NMRK2Q9NPI5 230 aa15.58■□□□□ 0.08
TTC28-203ENST00000442232 USP16Q9Y5T5 823 aa15.58■□□□□ 0.08
TTC28-203ENST00000442232 LMNB1P20700 586 aa15.57■□□□□ 0.08
TTC28-203ENST00000442232 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
TTC28-203ENST00000442232 ZC3H4Q9UPT8 1303 aaKnown RBP15.57■□□□□ 0.08
TTC28-203ENST00000442232 CLEC4GQ6UXB4 293 aa15.56■□□□□ 0.08
TTC28-203ENST00000442232 NBPF5PQ86XG9 351 aaPredicted RBP15.56■□□□□ 0.08
TTC28-203ENST00000442232 ARFGEF2Q9Y6D5 1785 aa15.55■□□□□ 0.08
TTC28-203ENST00000442232 PRAMEF22A3QJZ6 481 aa15.55■□□□□ 0.08
TTC28-203ENST00000442232 RALBP1Q15311 655 aa15.55■□□□□ 0.08
TTC28-203ENST00000442232 NFE2L2Q16236 605 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms