RNA–Protein interactions for RNA: ENST00000442217.5

CCDC115-203, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 1,847 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-203ENST00000442217 ABCC4O15439 1325 aa23.93■■□□□ 1.42
CCDC115-203ENST00000442217 LAMB4A4D0S4 1761 aa23.92■■□□□ 1.42
CCDC115-203ENST00000442217 CCDC136Q96JN2 1154 aa23.92■■□□□ 1.42
CCDC115-203ENST00000442217 USP16Q9Y5T5 823 aa23.92■■□□□ 1.42
CCDC115-203ENST00000442217 PTPRCP08575 1304 aa23.92■■□□□ 1.42
CCDC115-203ENST00000442217 FLIIQ13045 1269 aa23.91■■□□□ 1.42
CCDC115-203ENST00000442217 PROSER3Q2NL68 480 aa23.91■■□□□ 1.42
CCDC115-203ENST00000442217 FAM182BQ5T319 152 aa23.9■■□□□ 1.42
CCDC115-203ENST00000442217 F6X3S4 739 aa23.89■■□□□ 1.42
CCDC115-203ENST00000442217 FKBP5Q13451 457 aaPredicted RBP23.89■■□□□ 1.41
CCDC115-203ENST00000442217 SEPT12Q8IYM1 358 aa23.89■■□□□ 1.41
CCDC115-203ENST00000442217 DBF4Q9UBU7 674 aaPredicted RBP23.89■■□□□ 1.41
CCDC115-203ENST00000442217 KCNQ2O43526 872 aa23.88■■□□□ 1.41
CCDC115-203ENST00000442217 ONECUT3O60422 494 aaPredicted RBP23.88■■□□□ 1.41
CCDC115-203ENST00000442217 PIP4K2AP48426 406 aaPredicted RBP23.87■■□□□ 1.41
CCDC115-203ENST00000442217 PDIA6Q15084 440 aa23.87■■□□□ 1.41
CCDC115-203ENST00000442217 RBM42Q9BTD8 480 aaKnown RBP23.87■■□□□ 1.41
CCDC115-203ENST00000442217 CHMP4AQ9BY43 222 aa23.87■■□□□ 1.41
CCDC115-203ENST00000442217 DDX19BQ9UMR2 479 aa23.86■■□□□ 1.41
CCDC115-203ENST00000442217 MYL6BP14649 208 aa23.84■■□□□ 1.41
CCDC115-203ENST00000442217 SLC4A10Q6U841 1118 aa23.84■■□□□ 1.41
CCDC115-203ENST00000442217 DDX21Q9NR30 783 aaKnown RBP eCLIP23.84■■□□□ 1.41
CCDC115-203ENST00000442217 BRWD3Q6RI45 1802 aa23.83■■□□□ 1.41
CCDC115-203ENST00000442217 ZNF772Q68DY9 489 aaPredicted RBP23.83■■□□□ 1.41
CCDC115-203ENST00000442217 PTF1AQ7RTS3 328 aa23.83■■□□□ 1.41
CCDC115-203ENST00000442217 SLC4A9Q96Q91 983 aa23.82■■□□□ 1.4
CCDC115-203ENST00000442217 INTS3Q68E01 1043 aaKnown RBP23.82■■□□□ 1.4
CCDC115-203ENST00000442217 DNAJC10Q8IXB1 793 aa23.82■■□□□ 1.4
CCDC115-203ENST00000442217 HYPKQ9NX55 129 aa23.82■■□□□ 1.4
CCDC115-203ENST00000442217 AIMP1Q12904 312 aaKnown RBP23.8■■□□□ 1.4
CCDC115-203ENST00000442217 PCDHB15Q9Y5E8 787 aa23.8■■□□□ 1.4
CCDC115-203ENST00000442217 TJP1Q07157 1748 aa23.8■■□□□ 1.4
CCDC115-203ENST00000442217 NBPF26B4DH59 902 aa23.8■■□□□ 1.4
CCDC115-203ENST00000442217 ZBTB7BO15156 539 aaPredicted RBP23.8■■□□□ 1.4
CCDC115-203ENST00000442217 A1BGP04217 495 aa23.8■■□□□ 1.4
CCDC115-203ENST00000442217 NBPF14Q5TI25 921 aa23.8■■□□□ 1.4
CCDC115-203ENST00000442217 NBPF10Q6P3W6 841 aaKnown RBP23.8■■□□□ 1.4
CCDC115-203ENST00000442217 NBPF15Q8N660 670 aa23.8■■□□□ 1.4
CCDC115-203ENST00000442217 LRP10Q7Z4F1 713 aa23.79■■□□□ 1.4
CCDC115-203ENST00000442217 ZBTB40Q9NUA8 1239 aa23.79■■□□□ 1.4
CCDC115-203ENST00000442217 ADCY9O60503 1353 aa23.79■■□□□ 1.4
CCDC115-203ENST00000442217 NHSQ6T4R5 1651 aa23.79■■□□□ 1.4
CCDC115-203ENST00000442217 N4BP2Q86UW6 1770 aaPredicted RBP23.79■■□□□ 1.4
CCDC115-203ENST00000442217 PI4KAP2A4QPH2 592 aa23.78■■□□□ 1.4
CCDC115-203ENST00000442217 VSIG10Q8N0Z9 540 aa23.78■■□□□ 1.4
CCDC115-203ENST00000442217 PI4KAP1Q8N8J0 262 aa23.78■■□□□ 1.4
CCDC115-203ENST00000442217 SBF2Q86WG5 1849 aa23.78■■□□□ 1.4
CCDC115-203ENST00000442217 XAGE3Q8WTP9 111 aa23.77■■□□□ 1.4
CCDC115-203ENST00000442217 BTAF1O14981 1849 aa23.77■■□□□ 1.4
CCDC115-203ENST00000442217 RBM6P78332 1123 aaKnown RBP23.77■■□□□ 1.4
CCDC115-203ENST00000442217 C1orf115Q9H7X2 142 aa23.77■■□□□ 1.4
CCDC115-203ENST00000442217 PALLDQ8WX93 1383 aa23.76■■□□□ 1.39
CCDC115-203ENST00000442217 COPS6Q7L5N1 327 aa23.76■■□□□ 1.39
CCDC115-203ENST00000442217 CCT4P50991 539 aaKnown RBP23.75■■□□□ 1.39
CCDC115-203ENST00000442217 AAMPQ13685 434 aa23.75■■□□□ 1.39
CCDC115-203ENST00000442217 PXDNLA1KZ92 1463 aa23.75■■□□□ 1.39
CCDC115-203ENST00000442217 DNAAF4Q8WXU2 420 aa23.75■■□□□ 1.39
CCDC115-203ENST00000442217 RGS17Q9UGC6 210 aaPredicted RBP23.75■■□□□ 1.39
CCDC115-203ENST00000442217 MAP3K2Q9Y2U5 619 aa23.75■■□□□ 1.39
CCDC115-203ENST00000442217 IGHDP01880 384 aa23.74■■□□□ 1.39
CCDC115-203ENST00000442217 KSR2Q6VAB6 950 aa23.74■■□□□ 1.39
CCDC115-203ENST00000442217 ERBB4Q15303 1308 aa23.74■■□□□ 1.39
CCDC115-203ENST00000442217 MEIS3Q99687 375 aa23.73■■□□□ 1.39
CCDC115-203ENST00000442217 TEX13AQ9BXU3 409 aaPredicted RBP23.73■■□□□ 1.39
CCDC115-203ENST00000442217 KRT27Q7Z3Y8 459 aa23.73■■□□□ 1.39
CCDC115-203ENST00000442217 KDM2BQ8NHM5 1336 aa23.72■■□□□ 1.39
CCDC115-203ENST00000442217 LOC102724428A0A0B4J2F2 783 aa23.72■■□□□ 1.39
CCDC115-203ENST00000442217 CYP19A1P11511 503 aaPredicted RBP23.72■■□□□ 1.39
CCDC115-203ENST00000442217 SIK1P57059 783 aa23.72■■□□□ 1.39
CCDC115-203ENST00000442217 STARD3NLO95772 234 aa23.71■■□□□ 1.39
CCDC115-203ENST00000442217 ATP6V1AP38606 617 aa23.71■■□□□ 1.39
CCDC115-203ENST00000442217 DDX58O95786 925 aaKnown RBP23.7■■□□□ 1.39
CCDC115-203ENST00000442217 BEND3Q5T5X7 828 aa23.7■■□□□ 1.39
CCDC115-203ENST00000442217 SMARCC1Q92922 1105 aaPredicted RBP23.7■■□□□ 1.39
CCDC115-203ENST00000442217 ARFGEF2Q9Y6D5 1785 aa23.7■■□□□ 1.38
CCDC115-203ENST00000442217 ITPK1Q13572 414 aa23.7■■□□□ 1.38
CCDC115-203ENST00000442217 RIC3Q7Z5B4 369 aa23.7■■□□□ 1.38
CCDC115-203ENST00000442217 ZNF330Q9Y3S2 320 aaPredicted RBP23.7■■□□□ 1.38
CCDC115-203ENST00000442217 RXRBP28702 533 aa23.69■■□□□ 1.38
CCDC115-203ENST00000442217 TTLL7Q6ZT98 887 aa23.69■■□□□ 1.38
CCDC115-203ENST00000442217 SRCIN1Q9C0H9 1055 aa23.69■■□□□ 1.38
CCDC115-203ENST00000442217 CHMP4BQ9H444 224 aaKnown RBP23.69■■□□□ 1.38
CCDC115-203ENST00000442217 POTEAQ6S8J7 498 aa23.68■■□□□ 1.38
CCDC115-203ENST00000442217 ATP10DQ9P241 1426 aa23.68■■□□□ 1.38
CCDC115-203ENST00000442217 KCNQ4P56696 695 aa23.68■■□□□ 1.38
CCDC115-203ENST00000442217 ANKRD13DQ6ZTN6 518 aa23.68■■□□□ 1.38
CCDC115-203ENST00000442217 ZBTB1Q9Y2K1 713 aa23.68■■□□□ 1.38
CCDC115-203ENST00000442217 CICQ96RK0 1608 aaPredicted RBP23.67■■□□□ 1.38
CCDC115-203ENST00000442217 CENPQQ7L2Z9 268 aaPredicted RBP23.67■■□□□ 1.38
CCDC115-203ENST00000442217 NUP188Q5SRE5 1749 aa23.67■■□□□ 1.38
CCDC115-203ENST00000442217 CWF19L2Q2TBE0 894 aaKnown RBP23.66■■□□□ 1.38
CCDC115-203ENST00000442217 COL5A3P25940 1745 aaPredicted RBP23.66■■□□□ 1.38
CCDC115-203ENST00000442217 SKAP1Q86WV1 359 aa23.65■■□□□ 1.38
CCDC115-203ENST00000442217 USP44Q9H0E7 712 aa23.65■■□□□ 1.38
CCDC115-203ENST00000442217 FAM196AQ6ZSG2 479 aa23.64■■□□□ 1.38
CCDC115-203ENST00000442217 MYD88Q99836 296 aa23.64■■□□□ 1.38
CCDC115-203ENST00000442217 ZNF831Q5JPB2 1677 aa23.64■■□□□ 1.37
CCDC115-203ENST00000442217 MYH14Q7Z406 1995 aaKnown RBP23.64■■□□□ 1.37
CCDC115-203ENST00000442217 PLBD2Q8NHP8 589 aa23.63■■□□□ 1.37
CCDC115-203ENST00000442217 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms