RNA–Protein interactions for RNA: ENST00000441892.6

CDH17-202, Transcript of cadherin 17, humanhuman

TSL 2 BASIC

Gene CDH17, Length 2,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-202ENST00000441892 TPD52L1Q16890 204 aaPredicted RBP9.44□□□□□ -0.9
CDH17-202ENST00000441892 CASC1Q6TDU7 716 aa9.44□□□□□ -0.9
CDH17-202ENST00000441892 NFATC2IPQ8NCF5 419 aa9.44□□□□□ -0.9
CDH17-202ENST00000441892 ARHGEF1Q92888 912 aaKnown RBP9.44□□□□□ -0.9
CDH17-202ENST00000441892 PTPRCP08575 1304 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 H2AFXP16104 143 aaPredicted RBP9.43□□□□□ -0.9
CDH17-202ENST00000441892 UBE2HP62256 183 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 MKRN3Q13064 507 aaKnown RBP9.43□□□□□ -0.9
CDH17-202ENST00000441892 GPS2Q13227 327 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 KCNG1Q9UIX4 513 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 MED14O60244 1454 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 PLA2R1Q13018 1463 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 IQGAP1P46940 1657 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 CCDC171Q6TFL3 1326 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 WDR33Q9C0J8 1336 aaKnown RBP9.43□□□□□ -0.9
CDH17-202ENST00000441892 EXOSC9Q06265 439 aaKnown RBP9.43□□□□□ -0.9
CDH17-202ENST00000441892 ELF2Q15723 593 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 TTC22Q5TAA0 569 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 KRBA2Q6ZNG9 492 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 C10orf67Q8IYJ2 551 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 NECTIN2Q92692 538 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
CDH17-202ENST00000441892 ATG3Q9NT62 314 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 RYDENQ9NUL5 291 aaKnown RBP9.43□□□□□ -0.9
CDH17-202ENST00000441892 FHOD1Q9Y613 1164 aa9.43□□□□□ -0.9
CDH17-202ENST00000441892 ZC3H13Q5T200 1668 aaKnown RBP9.43□□□□□ -0.9
CDH17-202ENST00000441892 IQGAP3Q86VI3 1631 aa9.42□□□□□ -0.9
CDH17-202ENST00000441892 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
CDH17-202ENST00000441892 SMARCA5O60264 1052 aaPredicted RBP9.42□□□□□ -0.9
CDH17-202ENST00000441892 PPP1R37O75864 691 aa9.42□□□□□ -0.9
CDH17-202ENST00000441892 CCDC186Q7Z3E2 898 aa9.42□□□□□ -0.9
CDH17-202ENST00000441892 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.42□□□□□ -0.9
CDH17-202ENST00000441892 RTF1Q92541 710 aaKnown RBP9.42□□□□□ -0.9
CDH17-202ENST00000441892 CEP83Q9Y592 693 aa9.42□□□□□ -0.9
CDH17-202ENST00000441892 V9GYY5 206 aaPredicted RBP9.42□□□□□ -0.9
CDH17-202ENST00000441892 SLU7O95391 586 aaKnown RBP9.41□□□□□ -0.9
CDH17-202ENST00000441892 CCDC172P0C7W6 258 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 PLEKHM2Q8IWE5 1019 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 BANK1Q8NDB2 785 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 FAM212AQ96EL1 285 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 GDPD2Q9HCC8 539 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 JRKLQ9Y4A0 524 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 LMTK2Q8IWU2 1503 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 NPATQ14207 1427 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 A0A1B0GUL7 405 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 TRIM66O15016 1216 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 ZSCAN26Q16670 478 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 ALDH1L2Q3SY69 923 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
CDH17-202ENST00000441892 SRLQ86TD4 932 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 NEK11Q8NG66 645 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 TMX1Q9H3N1 280 aa9.41□□□□□ -0.9
CDH17-202ENST00000441892 LRRFIP2Q9Y608 721 aaKnown RBP9.41□□□□□ -0.9
CDH17-202ENST00000441892 PREX1Q8TCU6 1659 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.9
CDH17-202ENST00000441892 PNMA6AP0CW24 399 aaPredicted RBP9.4□□□□□ -0.9
CDH17-202ENST00000441892 CCDC192P0DO97 292 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 PLA2G4AP47712 749 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
CDH17-202ENST00000441892 LRMPQ12912 555 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 NYAP1Q6ZVC0 841 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 CNPY4Q8N129 248 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 CCDC191Q8NCU4 936 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 FAM200AQ8TCP9 573 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 TSR2Q969E8 191 aaKnown RBP9.4□□□□□ -0.9
CDH17-202ENST00000441892 CARD10Q9BWT7 1032 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 TET3O43151 1660 aa9.4□□□□□ -0.9
CDH17-202ENST00000441892 RPAP1Q9BWH6 1393 aaPredicted RBP9.4□□□□□ -0.9
CDH17-202ENST00000441892 GYS2P54840 703 aa9.4□□□□□ -0.91
CDH17-202ENST00000441892 CT47A1Q5JQC4 288 aaPredicted RBP9.4□□□□□ -0.91
CDH17-202ENST00000441892 GOLGA5Q8TBA6 731 aa9.4□□□□□ -0.91
CDH17-202ENST00000441892 ZNF592Q92610 1267 aa9.4□□□□□ -0.91
CDH17-202ENST00000441892 MFRPQ9BY79 579 aa9.4□□□□□ -0.91
CDH17-202ENST00000441892 MYOM2P54296 1465 aa9.4□□□□□ -0.91
CDH17-202ENST00000441892 ERBB3P21860 1342 aa9.4□□□□□ -0.91
CDH17-202ENST00000441892 IL16Q14005 1332 aa9.4□□□□□ -0.91
CDH17-202ENST00000441892 KDM5AP29375 1690 aaKnown RBP9.4□□□□□ -0.91
CDH17-202ENST00000441892 EFCAB6Q5THR3 1501 aa9.4□□□□□ -0.91
CDH17-202ENST00000441892 ADGRB2O60241 1585 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 KIF2AO00139 706 aaPredicted RBP9.39□□□□□ -0.91
CDH17-202ENST00000441892 ATP8B1O43520 1251 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 PRR29P0C7W0 189 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 NEK4P51957 841 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 PTPN14Q15678 1187 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 GIMAP6Q6P9H5 292 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 CEP120Q8N960 986 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 IQUBQ8NA54 791 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 FBXO18Q8NFZ0 1043 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 CARD14Q9BXL6 1004 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 NEMFO60524 1076 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDH17-202ENST00000441892 LCMT1Q9UIC8 334 aa9.39□□□□□ -0.91
CDH17-202ENST00000441892 RRP15Q9Y3B9 282 aaKnown RBP9.39□□□□□ -0.91
CDH17-202ENST00000441892 SETD1BQ9UPS6 1966 aaKnown RBP9.39□□□□□ -0.91
CDH17-202ENST00000441892 ELP1O95163 1332 aa9.38□□□□□ -0.91
CDH17-202ENST00000441892 PIK3R4Q99570 1358 aa9.38□□□□□ -0.91
CDH17-202ENST00000441892 PLEKHG2Q9H7P9 1386 aa9.38□□□□□ -0.91
CDH17-202ENST00000441892 ERC2O15083 957 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms