RNA–Protein interactions for RNA: ENST00000441400.5

AFF3-212, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-212ENST00000441400 N4BP2Q86UW6 1770 aaPredicted RBP35.62■■■■□ 3.29
AFF3-212ENST00000441400 HTATSF1O43719 755 aaKnown RBP35.62■■■■□ 3.29
AFF3-212ENST00000441400 RTF1Q92541 710 aaKnown RBP35.62■■■■□ 3.29
AFF3-212ENST00000441400 FMNL2Q96PY5 1086 aa35.61■■■■□ 3.29
AFF3-212ENST00000441400 NARFQ9UHQ1 456 aa35.61■■■■□ 3.29
AFF3-212ENST00000441400 BTBD11A6QL63 1104 aa35.6■■■■□ 3.29
AFF3-212ENST00000441400 DDR1Q08345 913 aa35.59■■■■□ 3.29
AFF3-212ENST00000441400 RALBP1Q15311 655 aa35.59■■■■□ 3.29
AFF3-212ENST00000441400 USPL1Q5W0Q7 1092 aa35.59■■■■□ 3.29
AFF3-212ENST00000441400 BRCA1P38398 1863 aaKnown RBP35.57■■■■□ 3.28
AFF3-212ENST00000441400 TM4SF1P30408 202 aa35.57■■■■□ 3.28
AFF3-212ENST00000441400 MCM10Q7L590 875 aa35.57■■■■□ 3.28
AFF3-212ENST00000441400 DLG5Q8TDM6 1919 aa35.57■■■■□ 3.28
AFF3-212ENST00000441400 NEFMP07197 916 aa35.56■■■■□ 3.28
AFF3-212ENST00000441400 CANXP27824 592 aaKnown RBP35.55■■■■□ 3.28
AFF3-212ENST00000441400 EIF5P55010 431 aaKnown RBP35.55■■■■□ 3.28
AFF3-212ENST00000441400 POLRMTO00411 1230 aaKnown RBP35.54■■■■□ 3.28
AFF3-212ENST00000441400 WWC3Q9ULE0 1092 aa35.54■■■■□ 3.28
AFF3-212ENST00000441400 A0A087WZG4 1122 aa35.53■■■■□ 3.28
AFF3-212ENST00000441400 KCNQ3O43525 872 aa35.53■■■■□ 3.28
AFF3-212ENST00000441400 PLEKHF1Q96S99 279 aa35.53■■■■□ 3.28
AFF3-212ENST00000441400 A0A0G2JLW4 131 aa35.52■■■■□ 3.28
AFF3-212ENST00000441400 DDX10Q13206 875 aaKnown RBP35.52■■■■□ 3.28
AFF3-212ENST00000441400 DPEP1P16444 411 aa35.51■■■■□ 3.28
AFF3-212ENST00000441400 PNNQ9H307 717 aaKnown RBP35.51■■■■□ 3.28
AFF3-212ENST00000441400 NRXN2Q9P2S2 1712 aa35.51■■■■□ 3.27
AFF3-212ENST00000441400 AFDNP55196 1824 aaKnown RBP35.5■■■■□ 3.27
AFF3-212ENST00000441400 DCTN1Q14203 1278 aa35.5■■■■□ 3.27
AFF3-212ENST00000441400 BCL2L12Q9HB09 334 aa35.5■■■■□ 3.27
AFF3-212ENST00000441400 SCN7AQ01118 1682 aa35.49■■■■□ 3.27
AFF3-212ENST00000441400 IL6STP40189 918 aaPredicted RBP35.49■■■■□ 3.27
AFF3-212ENST00000441400 NFIXQ14938 502 aa35.49■■■■□ 3.27
AFF3-212ENST00000441400 TAF7Q15545 349 aaPredicted RBP35.46■■■■□ 3.27
AFF3-212ENST00000441400 ARFGEF1Q9Y6D6 1849 aa35.46■■■■□ 3.27
AFF3-212ENST00000441400 KCNA3P22001 575 aa35.45■■■■□ 3.27
AFF3-212ENST00000441400 NFE2L2Q16236 605 aa35.45■■■■□ 3.27
AFF3-212ENST00000441400 BCS1LQ9Y276 419 aa35.45■■■■□ 3.27
AFF3-212ENST00000441400 ADCY9O60503 1353 aa35.45■■■■□ 3.27
AFF3-212ENST00000441400 SNRPA1P09661 255 aaKnown RBP35.44■■■■□ 3.26
AFF3-212ENST00000441400 MYBBP1AQ9BQG0 1328 aaKnown RBP35.43■■■■□ 3.26
AFF3-212ENST00000441400 MAPK8IP3Q9UPT6 1336 aa35.43■■■■□ 3.26
AFF3-212ENST00000441400 A1BGP04217 495 aa35.43■■■■□ 3.26
AFF3-212ENST00000441400 USP16Q9Y5T5 823 aa35.42■■■■□ 3.26
AFF3-212ENST00000441400 ATP10DQ9P241 1426 aa35.41■■■■□ 3.26
AFF3-212ENST00000441400 KDM3BQ7LBC6 1761 aa35.41■■■■□ 3.26
AFF3-212ENST00000441400 PIM2Q9P1W9 311 aa35.41■■■■□ 3.26
AFF3-212ENST00000441400 NPM2Q86SE8 214 aaKnown RBP35.4■■■■□ 3.26
AFF3-212ENST00000441400 BCORQ6W2J9 1755 aa35.39■■■■□ 3.26
AFF3-212ENST00000441400 SERPINB2P05120 415 aa35.39■■■■□ 3.26
AFF3-212ENST00000441400 PNISRQ8TF01 805 aaKnown RBP35.39■■■■□ 3.26
AFF3-212ENST00000441400 ZNF330Q9Y3S2 320 aaPredicted RBP35.39■■■■□ 3.26
AFF3-212ENST00000441400 TBC1D2BQ9UPU7 963 aa35.38■■■■□ 3.25
AFF3-212ENST00000441400 LAMB4A4D0S4 1761 aa35.38■■■■□ 3.25
AFF3-212ENST00000441400 PRAMEF22A3QJZ6 481 aa35.37■■■■□ 3.25
AFF3-212ENST00000441400 DLEC1Q9Y238 1755 aa35.36■■■■□ 3.25
AFF3-212ENST00000441400 CHRNA5P30532 468 aa35.35■■■■□ 3.25
AFF3-212ENST00000441400 CAMTA2O94983 1202 aa35.34■■■■□ 3.25
AFF3-212ENST00000441400 DALRD3Q5D0E6 543 aaKnown RBP35.34■■■■□ 3.25
AFF3-212ENST00000441400 TBC1D9BQ66K14 1250 aa35.34■■■■□ 3.25
AFF3-212ENST00000441400 BICDL1Q6ZP65 573 aa35.33■■■■□ 3.25
AFF3-212ENST00000441400 MIS18AQ9NYP9 233 aa35.33■■■■□ 3.25
AFF3-212ENST00000441400 GIGYF1O75420 1035 aaPredicted RBP35.32■■■■□ 3.24
AFF3-212ENST00000441400 DZIP3Q86Y13 1208 aaKnown RBP35.32■■■■□ 3.24
AFF3-212ENST00000441400 CARMIL3Q8ND23 1372 aa35.32■■■■□ 3.24
AFF3-212ENST00000441400 ARHGAP27Q6ZUM4 889 aa35.31■■■■□ 3.24
AFF3-212ENST00000441400 THUMPD2Q9BTF0 503 aaKnown RBP35.3■■■■□ 3.24
AFF3-212ENST00000441400 PIP4K2AP48426 406 aaPredicted RBP35.29■■■■□ 3.24
AFF3-212ENST00000441400 C1QTNF8P60827 252 aa35.29■■■■□ 3.24
AFF3-212ENST00000441400 ANKRD31Q8N7Z5 1873 aa35.28■■■■□ 3.24
AFF3-212ENST00000441400 NBPF26B4DH59 902 aa35.27■■■■□ 3.24
AFF3-212ENST00000441400 NBPF10Q6P3W6 841 aaKnown RBP35.27■■■■□ 3.24
AFF3-212ENST00000441400 NBPF15Q8N660 670 aa35.27■■■■□ 3.24
AFF3-212ENST00000441400 RGL2O15211 777 aa35.26■■■■□ 3.24
AFF3-212ENST00000441400 EIF4A1P60842 406 aaKnown RBP35.26■■■■□ 3.24
AFF3-212ENST00000441400 CLEC4GQ6UXB4 293 aa35.26■■■■□ 3.24
AFF3-212ENST00000441400 GPBP1L1Q9HC44 474 aaPredicted RBP35.26■■■■□ 3.24
AFF3-212ENST00000441400 RIPK4P57078 832 aa35.25■■■■□ 3.23
AFF3-212ENST00000441400 SETDB2Q96T68 719 aa35.25■■■■□ 3.23
AFF3-212ENST00000441400 PRKRIP1Q9H875 184 aaPredicted RBP35.24■■■■□ 3.23
AFF3-212ENST00000441400 TMPOP42166 694 aaKnown RBP35.23■■■■□ 3.23
AFF3-212ENST00000441400 LMOD3Q0VAK6 560 aa35.23■■■■□ 3.23
AFF3-212ENST00000441400 PRR5LQ6MZQ0 368 aa35.23■■■■□ 3.23
AFF3-212ENST00000441400 PDZRN3Q9UPQ7 1066 aa35.23■■■■□ 3.23
AFF3-212ENST00000441400 ZNF652Q9Y2D9 606 aa35.23■■■■□ 3.23
AFF3-212ENST00000441400 C2CD5Q86YS7 1000 aa35.22■■■■□ 3.23
AFF3-212ENST00000441400 BRIP1Q9BX63 1249 aa35.22■■■■□ 3.23
AFF3-212ENST00000441400 H0YIN7 160 aa35.21■■■■□ 3.23
AFF3-212ENST00000441400 ZEB1P37275 1124 aaPredicted RBP35.2■■■■□ 3.23
AFF3-212ENST00000441400 WDR43Q15061 677 aaKnown RBP eCLIP35.2■■■■□ 3.23
AFF3-212ENST00000441400 CNBD1Q8NA66 436 aa35.2■■■■□ 3.23
AFF3-212ENST00000441400 BABAM1Q9NWV8 329 aa35.2■■■■□ 3.23
AFF3-212ENST00000441400 PDE6BP35913 854 aa35.19■■■■□ 3.22
AFF3-212ENST00000441400 TTLL6Q8N841 843 aa35.19■■■■□ 3.22
AFF3-212ENST00000441400 ZNF526Q8TF50 670 aaPredicted RBP35.18■■■■□ 3.22
AFF3-212ENST00000441400 SBF1O95248 1867 aa35.18■■■■□ 3.22
AFF3-212ENST00000441400 COL11A2P13942 1736 aaPredicted RBP35.18■■■■□ 3.22
AFF3-212ENST00000441400 RUNDC1Q96C34 613 aa35.17■■■■□ 3.22
AFF3-212ENST00000441400 TSPYL4Q9UJ04 414 aa35.17■■■■□ 3.22
AFF3-212ENST00000441400 CCDC146Q8IYE0 955 aa35.15■■■■□ 3.22
AFF3-212ENST00000441400 ST5P78524 1137 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms