RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 PPP4R3BQ5MIZ7 849 aa7.71□□□□□ -1.17
USP46-201ENST00000441222 ZNF444Q8N0Y2 327 aaPredicted RBP7.71□□□□□ -1.17
USP46-201ENST00000441222 TCP11L1Q9NUJ3 509 aa7.71□□□□□ -1.17
USP46-201ENST00000441222 ERICH3Q5RHP9 1530 aa7.71□□□□□ -1.17
USP46-201ENST00000441222 MYL6BP14649 208 aa7.71□□□□□ -1.17
USP46-201ENST00000441222 KIF5BP33176 963 aa7.71□□□□□ -1.17
USP46-201ENST00000441222 IDH1O75874 414 aaKnown RBP7.71□□□□□ -1.18
USP46-201ENST00000441222 NUP88Q99567 741 aaPredicted RBP7.71□□□□□ -1.18
USP46-201ENST00000441222 BACH2Q9BYV9 841 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 MCM5P33992 734 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 METTL24Q5JXM2 366 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 HMGB1P1B2RPK0 211 aaPredicted RBP7.71□□□□□ -1.18
USP46-201ENST00000441222 UBE4AQ14139 1066 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 CCDC155Q8N6L0 562 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 KCNH5Q8NCM2 988 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 PKNOX2Q96KN3 472 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 FCHSD2O94868 740 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 PRPHP41219 470 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 HLTFQ14527 1009 aaKnown RBP eCLIP7.71□□□□□ -1.18
USP46-201ENST00000441222 CATIPQ7Z7H3 387 aa7.71□□□□□ -1.18
USP46-201ENST00000441222 BCCIPQ9P287 314 aaKnown RBP eCLIP7.71□□□□□ -1.18
USP46-201ENST00000441222 CKAP4Q07065 602 aaKnown RBP7.7□□□□□ -1.18
USP46-201ENST00000441222 URI1O94763 535 aaPredicted RBP7.7□□□□□ -1.18
USP46-201ENST00000441222 LRRC9Q6ZRR7 1453 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 SMARCC1Q92922 1105 aaPredicted RBP7.7□□□□□ -1.18
USP46-201ENST00000441222 DDX19AQ9NUU7 478 aaKnown RBP7.7□□□□□ -1.18
USP46-201ENST00000441222 TDRD12Q587J7 1177 aaKnown RBP7.7□□□□□ -1.18
USP46-201ENST00000441222 CTR9Q6PD62 1173 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 DAAM2Q86T65 1068 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 DZIP1Q86YF9 867 aaKnown RBP7.7□□□□□ -1.18
USP46-201ENST00000441222 STMN4Q9H169 189 aaPredicted RBP7.7□□□□□ -1.18
USP46-201ENST00000441222 ABCF2Q9UG63 623 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 ANKRD30BQ9BXX2 1392 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 GNAT3A8MTJ3 354 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 ZPR1O75312 459 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 SSRP1Q08945 709 aaKnown RBP7.7□□□□□ -1.18
USP46-201ENST00000441222 CEP112Q8N8E3 955 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 CNNM3Q8NE01 707 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.7□□□□□ -1.18
USP46-201ENST00000441222 NSRP1Q9H0G5 558 aaKnown RBP7.7□□□□□ -1.18
USP46-201ENST00000441222 C1orf115Q9H7X2 142 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 KIF4AO95239 1232 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 POGZQ7Z3K3 1410 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 HECW1Q76N89 1606 aa7.7□□□□□ -1.18
USP46-201ENST00000441222 ERICH4A6NGS2 130 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 BMS1Q14692 1282 aaKnown RBP7.69□□□□□ -1.18
USP46-201ENST00000441222 DDX54Q8TDD1 881 aaKnown RBP7.69□□□□□ -1.18
USP46-201ENST00000441222 RTEL1-TNFRSF6BF6WH68 1400 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 PPP1R14CQ8TAE6 165 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 RAB3IL1Q8TBN0 382 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 TBC1D5Q92609 795 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 PRAM1Q96QH2 718 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 SLC12A7Q9Y666 1083 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 SELENOOQ9BVL4 669 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 RPGRIP1LQ68CZ1 1315 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 CCDC194A0A1B0GVG4 234 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 SPDYE4A6NLX3 237 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 ZNF213O14771 459 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 RNF187Q5TA31 235 aaPredicted RBP7.69□□□□□ -1.18
USP46-201ENST00000441222 KLHL10Q6JEL2 608 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 CDK19Q9BWU1 502 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 TTF1Q15361 905 aaPredicted RBP7.69□□□□□ -1.18
USP46-201ENST00000441222 DDX46Q7L014 1031 aaKnown RBP7.69□□□□□ -1.18
USP46-201ENST00000441222 PAXBP1Q9Y5B6 917 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 DHX29Q7Z478 1369 aaKnown RBP7.69□□□□□ -1.18
USP46-201ENST00000441222 ABCC11Q96J66 1382 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 SLC5A1P13866 664 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 MTIF2P46199 727 aaKnown RBP7.69□□□□□ -1.18
USP46-201ENST00000441222 EHBP1L1Q8N3D4 1523 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 STX1AQ16623 288 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 PRDM11Q9NQV5 511 aa7.69□□□□□ -1.18
USP46-201ENST00000441222 ZWINTO95229 277 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 BMP15O95972 392 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 RMND1Q9NWS8 449 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 MACROD2A1Z1Q3 448 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 SLU7O95391 586 aaKnown RBP7.68□□□□□ -1.18
USP46-201ENST00000441222 PRKCSHP14314 528 aaPredicted RBP7.68□□□□□ -1.18
USP46-201ENST00000441222 AMOTQ4VCS5 1084 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 UBA5Q9GZZ9 404 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 CLIP2Q9UDT6 1046 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 STX6O43752 255 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 TMEM132EQ6IEE7 984 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 CCDC174Q6PII3 467 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 ANKS4BQ8N8V4 417 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 SYCE3A1L190 88 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 MINDY4BA8MYZ0 360 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 HSF2BPO75031 334 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 LMAN1P49257 510 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 KIAA0753Q2KHM9 967 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 SYCP3Q8IZU3 236 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 EFCAB5A4FU69 1503 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 NOP2P46087 812 aaKnown RBP7.68□□□□□ -1.18
USP46-201ENST00000441222 ALDH1L2Q3SY69 923 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 FMNL3Q8IVF7 1028 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 FBF1Q8TES7 1133 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 CTAGE1Q96RT6 745 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 RASAL2Q9UJF2 1139 aa7.68□□□□□ -1.18
USP46-201ENST00000441222 CASKIN1Q8WXD9 1431 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 TMCO5BA8MYB1 307 aa7.67□□□□□ -1.18
USP46-201ENST00000441222 IFIT5Q13325 482 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms